BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0761100 Os01g0761100|AK122112
(619 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0761100 Tesmin/TSO1-like, CXC domain containing protein 964 0.0
Os06g0332700 Tesmin/TSO1-like, CXC domain containing protein 229 3e-60
Os08g0369600 Similar to Cysteine-rich polycomb-like protein 122 6e-28
Os07g0176200 Tesmin/TSO1-like, CXC domain containing protein 102 9e-22
Os12g0605500 Tesmin/TSO1-like, CXC domain containing protein 101 1e-21
Os02g0274400 Tesmin/TSO1-like, CXC domain containing protein 101 1e-21
Os05g0588000 82 1e-15
Os05g0509400 Similar to DNA binding protein-like 76 6e-14
Os12g0605300 Tesmin/TSO1-like, CXC domain containing protein 73 5e-13
>Os01g0761100 Tesmin/TSO1-like, CXC domain containing protein
Length = 619
Score = 964 bits (2491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/619 (79%), Positives = 495/619 (79%)
Query: 1 MAGKEXXXXXXXXXXXXXXXXXXXXXXXIKKLVRQLDFTSXXXXXXXXXXXXXXXXXXXL 60
MAGKE IKKLVRQLDFTS L
Sbjct: 1 MAGKEQQGGGGPPPPPRAPVPAASSQPPIKKLVRQLDFTSAALAGNPAMAAAAAAVSRAL 60
Query: 61 QPRAVPVGFPQPQQLRAHLPVGVPQQLHPRGLPVMRSXXXXXXXXXXXXXXXXXXXXXXX 120
QPRAVPVGFPQPQQLRAHLPVGVPQQLHPRGLPVMRS
Sbjct: 61 QPRAVPVGFPQPQQLRAHLPVGVPQQLHPRGLPVMRSHHVVHVPLPRPAVAVAVPVPQVR 120
Query: 121 XXXXXXXXXXXXXXXXKPESPKPPRARLYEGKDGTPTXXXXXXXXXXXXXXLYCECFASG 180
KPESPKPPRARLYEGKDGTPT LYCECFASG
Sbjct: 121 PAQPQPVPRPPVAVPLKPESPKPPRARLYEGKDGTPTKKKCCNCKHSKCLKLYCECFASG 180
Query: 181 VYCDGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRNNMEAAGDLPLV 240
VYCDGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRNNMEAAGDLPLV
Sbjct: 181 VYCDGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRNNMEAAGDLPLV 240
Query: 241 GKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERKALFQGDHKNSIHM 300
GKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERKALFQGDHKNSIHM
Sbjct: 241 GKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERKALFQGDHKNSIHM 300
Query: 301 QQXXXXXXXXXXXXXXFSSPSASRKRKHIDPSLDHSAKENGAHRTNHVPQKNGMPSDGPL 360
QQ FSSPSASRKRKHIDPSLDHSAKENGAHRTNHVPQKNGMPSDGPL
Sbjct: 301 QQAANAAVNGAIGAAAFSSPSASRKRKHIDPSLDHSAKENGAHRTNHVPQKNGMPSDGPL 360
Query: 361 PINQPVHPPTLGPFKVTYRPLLADIVQPGDVKELCKLLVVVSGNAAKAYAGKKSQDKVVE 420
PINQPVHPPTLGPFKVTYRPLLADIVQPGDVKELCKLLVVVSGNAAKAYAGKKSQDKVVE
Sbjct: 361 PINQPVHPPTLGPFKVTYRPLLADIVQPGDVKELCKLLVVVSGNAAKAYAGKKSQDKVVE 420
Query: 421 KEDEMGGKREGEIGGSLASTNHDREENNNDPNNQKASADDPSTGGTRAGKASLEESKHDC 480
KEDEMGGKREGEIGGSLASTNHDREENNNDPNNQKASADDPSTGGTRAGKASLEESKHDC
Sbjct: 421 KEDEMGGKREGEIGGSLASTNHDREENNNDPNNQKASADDPSTGGTRAGKASLEESKHDC 480
Query: 481 NDDQKSNRPMSPGTLALMCDEQDTMFMTSXXXXXXXXXXXXXXXSELYAEQERCVLTEFR 540
NDDQKSNRPMSPGTLALMCDEQDTMFMTS SELYAEQERCVLTEFR
Sbjct: 481 NDDQKSNRPMSPGTLALMCDEQDTMFMTSQNVVPQQPAPVNQNQSELYAEQERCVLTEFR 540
Query: 541 DCLHKLVTFGRMKEEKFSMAIKSEVPAHPMQANGVSRIPYSKEVDVPVVKTFLQSSSRHP 600
DCLHKLVTFGRMKEEKFSMAIKSEVPAHPMQANGVSRIPYSKEVDVPVVKTFLQSSSRHP
Sbjct: 541 DCLHKLVTFGRMKEEKFSMAIKSEVPAHPMQANGVSRIPYSKEVDVPVVKTFLQSSSRHP 600
Query: 601 AAGNSATGHLDKKPKHENT 619
AAGNSATGHLDKKPKHENT
Sbjct: 601 AAGNSATGHLDKKPKHENT 619
>Os06g0332700 Tesmin/TSO1-like, CXC domain containing protein
Length = 448
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 196/389 (50%), Gaps = 45/389 (11%)
Query: 172 LYCECFASGVYCDGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRNNM 231
LYCECFA+G+YCDGC+C C N V NE+AR+EAI++T +RNP AF+PKI + +A
Sbjct: 42 LYCECFAAGLYCDGCHCKQCGNYVGNESARQEAINSTKQRNPKAFQPKIENGSNALNLRK 101
Query: 232 EAAGDLPLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERKALFQ 291
+ AG + KHNKGCHCKKSGCLKKYCECFQANILCS+NCKC DCKNFEGSEE + + Q
Sbjct: 102 DDAGAPASLPKHNKGCHCKKSGCLKKYCECFQANILCSKNCKCQDCKNFEGSEELRLITQ 161
Query: 292 GDHKNSI-HMQQXXXXXXXXXXXXXXFSSPSASRKR---KHIDPSL--DHSAKENGAHRT 345
GD+ + ++Q + RKR H+ L + S +
Sbjct: 162 GDNSSDRNNIQHAANVALNGAIGSSGYRYSPVRRKRPPEDHLYQKLNGEGSTMQTQFQEA 221
Query: 346 NHVPQKNGMPSDGPLPINQPVHPPTLGPFKVTYRPLLADIVQPGDVKELCKLLVVVSGNA 405
NHV S G + + V YR LA+ + P D L K LV+V A
Sbjct: 222 NHVDSSEITSSTGL----EGCYSNYQSRSNVVYRSALANTISPTDATGLAKHLVIVCRKA 277
Query: 406 AKAYAGKKSQDKVVEKEDEMGGKREGEIGGSLASTNHDREENNNDPNNQKASADDPSTGG 465
A A+ +E E E+ +G +TN D++ GG
Sbjct: 278 ADAFLTTAENKGEMEVEREIHTDSDG-------ATNMDQQ-----------------NGG 313
Query: 466 TRAGKASLEESKHDCNDDQKSNRPMSPGTLALMCDEQDTMFMTSXXXXXXXXXXXXXXXS 525
C + + +RP SPGT ALMCDEQD+ F T S
Sbjct: 314 DFG----------PCCNSLEDSRPASPGTQALMCDEQDSTFGTD-YRISFPVALHDQDTS 362
Query: 526 ELYAEQERCVLTEFRDCLHKLVTFGRMKE 554
EL A+QE+ VLT FRD L ++T G++ E
Sbjct: 363 ELNAQQEKAVLTGFRDYLRTVITRGKINE 391
>Os08g0369600 Similar to Cysteine-rich polycomb-like protein
Length = 369
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 7/160 (4%)
Query: 140 SPKPPRARLYEGKDGTPTXXXXXXXXXXXXXXLYCECFASGVYCDGCNCSNCFNNVKNET 199
S KP E KD T T LYCECF G YC GCNC+NC NNV +E
Sbjct: 152 SQKPSSEMWSETKDVTLTRKTNCSCKYSKCLKLYCECFEKGRYCIGCNCTNCCNNVNHEN 211
Query: 200 ARREAIDATLERNPDAFRPKIGSSPHANRNNMEAAGDLPLVGKHNKGCHCKKSGCLKKYC 259
AR++AI+ LERNP AF PK+ +S N + A GD +VGKH KGC CK++ CLKKYC
Sbjct: 212 ARQDAINVALERNPAAFMPKVLNSTAHNCESKAAEGD--IVGKHTKGCKCKRTECLKKYC 269
Query: 260 ECFQANILCSENCKCMDCKNFEGSEERKALFQGDHKNSIH 299
ECF+A++ CSENC+C CKN++ + +R + KN++H
Sbjct: 270 ECFKASVFCSENCRCTGCKNYKSNADRIS-----QKNTVH 304
>Os07g0176200 Tesmin/TSO1-like, CXC domain containing protein
Length = 782
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 172 LYCECFASGVYC-DGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRN- 229
LYCECFA+GVYC + C+C C N +E RNP AF PK+ A ++
Sbjct: 480 LYCECFAAGVYCSEPCSCQGCLNKPIHEEIVLSTRKQIEFRNPLAFAPKVIRMSDAGQDI 539
Query: 230 NMEAAGDLPLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEG 282
E + P +H +GC+CKKS CLKKYCEC+Q + CS NC+C CKN G
Sbjct: 540 TGEDPNNTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSSNCRCEGCKNTFG 592
>Os12g0605500 Tesmin/TSO1-like, CXC domain containing protein
Length = 760
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 172 LYCECFASGVYC-DGCNCSNCFN---NVKNETARREAIDATLERNPDAFRPKIGSSPHAN 227
LYCECF +GV+C + C+C C N N++ + RE I++ RNP AF PK+ +
Sbjct: 469 LYCECFHAGVFCSEPCSCQGCLNMPSNMETVLSTREQIES---RNPLAFAPKVIRT-EPG 524
Query: 228 RNNMEAAGDLPLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERK 287
+ + + P +H +GC+CKKS CLKKYCEC+Q + CS +C+C CKN G E
Sbjct: 525 QELADDSNKTPASSRHKRGCNCKKSSCLKKYCECYQGGVGCSVSCRCEGCKNAFGRREGV 584
Query: 288 ALF 290
AL
Sbjct: 585 ALL 587
>Os02g0274400 Tesmin/TSO1-like, CXC domain containing protein
Length = 140
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 3/64 (4%)
Query: 228 RNNMEAAGDLPLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERK 287
++N EA +P + KHNKGCHC+KS CLKKYCECFQANILCS+NC+C DCKNFEGSEERK
Sbjct: 12 QDNSEA---IPPIPKHNKGCHCRKSECLKKYCECFQANILCSKNCRCQDCKNFEGSEERK 68
Query: 288 ALFQ 291
AL Q
Sbjct: 69 ALVQ 72
>Os05g0588000
Length = 194
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 172 LYCECFASGVYC-DGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKI---------- 220
LYC CF S +C D CNCS C+N E A E D +NP+AF P+I
Sbjct: 20 LYCRCFRSRYFCSDNCNCSGCYNIKYYEDAIEEISDMIQMKNPNAFDPRIIVSVQDATAA 79
Query: 221 --GSSPHANRNNMEAAGDLP--LVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMD 276
SS A + + +P KH KGC C+KS C K YCECF+ ++ C+ CKC++
Sbjct: 80 DPQSSTSAISDPKNTSDAMPGNEQRKHAKGCSCRKSKCSKLYCECFKNSVGCTAKCKCLE 139
Query: 277 CKNFEG 282
C N G
Sbjct: 140 CSNSFG 145
>Os05g0509400 Similar to DNA binding protein-like
Length = 374
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 140 SPKPPRARLYEGKDGTPTXXXXXXXXXXXXXXLYCECFASGVYC-DGCNCSNCFNNVKNE 198
+P P R ++ E DG LYC CFA G YC + C C CFN
Sbjct: 68 TPTPKRQKVEESADGNGCKHCACKKSRCLK--LYCPCFAGGGYCSEKCGCQPCFNKALYA 125
Query: 199 TARREAIDATLERNPDAFRPKIGSSPHANRNNMEAAGDLPLVGKHNKGCHCKKSGCLKKY 258
+ L R KI AN +E A +GC+CKKS CLKKY
Sbjct: 126 ETVQTTRKVLLSRQ-KRMSLKINRRSEANAEAVEDAHHSSSSTPPRRGCNCKKSSCLKKY 184
Query: 259 CECFQANILCSENCKCMDCKNFEGSEE 285
C+C+Q CS C+C DC+N G E
Sbjct: 185 CDCYQDGTGCSLFCRCEDCRNPFGKNE 211
>Os12g0605300 Tesmin/TSO1-like, CXC domain containing protein
Length = 407
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 173 YCECFASGVYC-DGCNCSNCFNNVKNETARREAIDATLERNPDAFRPKIGSSPHANRNNM 231
YC CFASG +C + C C C+N ++I P A K + ++++
Sbjct: 114 YCVCFASGSHCSESCGCDPCYN---------KSIHGVPRSTP-ALPLKAVQTLETGQDSV 163
Query: 232 EAAGDLPLVGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERKALFQ 291
E P+ K C CKKSGCLKKYC+C+Q CS NCKC DCKN G RK
Sbjct: 164 EQLIRSPMDFGRRK-CTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNPYG---RKVGVI 219
Query: 292 GDHKNSI 298
D KN +
Sbjct: 220 LDGKNIL 226
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,296,563
Number of extensions: 802960
Number of successful extensions: 2060
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2036
Number of HSP's successfully gapped: 11
Length of query: 619
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 512
Effective length of database: 11,448,903
Effective search space: 5861838336
Effective search space used: 5861838336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 159 (65.9 bits)