Os01g0761100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tesmin/TSO1-like, CXC domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0761100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Tesmin/TSO1-like, CXC domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.97 | 0.382 | 9.47 | 0.393 | 0.206 | 0.613 | -0.54 | -0.456 | 0.291 | 1.17 | 74.38 | 1434 | -- | -- |
| 66.41 | 0.38 | 9.48 | 0.33 | 0.233 | 0.605 | -0.545 | -- | 0.276 | 1.24 | 74 | 1404 | -- | -- |
| 67.07 | 0.381 | 9.47 | 0.424 | 0.188 | 0.611 | -- | -0.52 | 0.293 | 0.292 | 74.55 | 1469 | -- | -- |
| 67.61 | 0.383 | 9.48 | 0.346 | 0.229 | 0.611 | -- | -- | 0.278 | 0.773 | 74.02 | 1409 | -- | -- |
| 68.58 | 0.386 | 9.46 | 0.438 | -- | 0.647 | -- | -0.732 | 0.3 | -- | 75 | 1564 | -- | -- |
| 78.25 | 0.415 | 9.5 | 0.229 | 0.212 | -- | -0.655 | -- | 0.193 | 1.17 | -- | -- | -- | -- |
| 79.94 | 0.419 | 9.49 | 0.253 | 0.215 | -- | -- | -- | 0.197 | 0.447 | -- | -- | -- | -- |
| 69.68 | 0.389 | 9.47 | 0.344 | -- | 0.623 | -- | -- | 0.281 | -- | 75 | 1530 | -- | -- |
| 70.72 | 0.392 | 9.49 | -- | 0.238 | 0.572 | -- | -- | 0.235 | 0.839 | 74.87 | 1403 | -- | -- |
| 82.84 | 0.425 | 9.49 | 0.261 | -- | -- | -- | -- | 0.201 | -- | -- | -- | -- | -- |
| 81.63 | 0.423 | 9.5 | -- | 0.218 | -- | -- | -- | 0.169 | 0.506 | -- | -- | -- | -- |
| 72.84 | 0.397 | 9.48 | -- | -- | 0.598 | -- | -- | 0.233 | -- | 74.94 | 1565 | -- | -- |
| 84.63 | 0.429 | 9.5 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 2 | 64.09 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 16 |
| 4 | 64.21 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 7 | 64.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 8 | 64.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 15 | 64.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 21 | 64.37 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 24 | 64.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 25 | 64.40 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 31 | 64.43 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 51 | 64.70 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 68 | 64.96 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 81 | 65.02 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 89 | 65.09 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 99 | 65.15 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 122 | 65.34 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 123 | 65.35 | humidity | 70 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 130 | 65.38 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 134 | 65.41 | humidity | 80 | 720 | > th | dose independent | rect. | 4 | 18 |
| 166 | 65.60 | radiation | 10 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 167 | 65.60 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 20 |
| 191 | 65.73 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 15 |
| 311 | 66.10 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |
| 349 | 66.18 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 363 | 66.20 | humidity | 50 | 1440 | > th | dose dependent | rect. | 2 | 15 |
| 369 | 66.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 375 | 66.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 430 | 66.35 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 444 | 66.37 | humidity | 60 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 452 | 66.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 472 | 66.42 | humidity | 80 | 720 | > th | dose independent | sin | 21 | NA |
| 481 | 66.44 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 10 |
| 492 | 66.45 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 503 | 66.46 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 537 | 66.50 | humidity | 80 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 593 | 66.57 | radiation | 10 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 599 | 66.58 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 612 | 66.61 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 621 | 66.62 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 639 | 66.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 640 | 66.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 645 | 66.64 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 656 | 66.65 | humidity | 50 | 1440 | > th | dose dependent | sin | 0 | NA |
| 670 | 66.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 681 | 66.66 | radiation | 10 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 704 | 66.68 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 717 | 66.69 | radiation | 10 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 779 | 66.74 | radiation | 1 | 720 | < th | dose independent | rect. | 7 | 17 |
| 792 | 66.75 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 987 | 66.90 | humidity | 70 | 720 | > th | dose dependent | sin | 21 | NA |
| 998 | 66.91 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 13 |