Os06g0332700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tesmin/TSO1-like, CXC domain containing protein.
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Os06g0332700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tesmin/TSO1-like, CXC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.8 | 0.539 | 6.21 | 0.937 | 0.653 | -1.07 | -0.0474 | -0.0597 | -0.409 | 10.5 | 21.8 | 1576 | -- | -- |
| 131.81 | 0.535 | 6.2 | 0.951 | 0.655 | -1.06 | -0.0507 | -- | -0.406 | 10.5 | 21.79 | 1574 | -- | -- |
| 131.81 | 0.535 | 6.21 | 0.936 | 0.653 | -1.07 | -- | -0.0595 | -0.409 | 10.5 | 21.8 | 1575 | -- | -- |
| 131.82 | 0.535 | 6.2 | 0.951 | 0.654 | -1.06 | -- | -- | -0.406 | 10.5 | 21.79 | 1575 | -- | -- |
| 148.22 | 0.567 | 6.22 | 0.855 | -- | -1.05 | -- | -0.0233 | -0.405 | -- | 21.9 | 859 | -- | -- |
| 167.54 | 0.607 | 6.28 | 0.508 | 0.66 | -- | -0.089 | -- | -0.729 | 10.6 | -- | -- | -- | -- |
| 167.57 | 0.606 | 6.28 | 0.504 | 0.66 | -- | -- | -- | -0.729 | 10.6 | -- | -- | -- | -- |
| 148.18 | 0.567 | 6.22 | 0.848 | -- | -1.04 | -- | -- | -0.397 | -- | 22 | 854 | -- | -- |
| 150.27 | 0.571 | 6.24 | -- | 0.647 | -0.779 | -- | -- | -0.555 | 10.3 | 22.1 | 1495 | -- | -- |
| 194.38 | 0.651 | 6.29 | 0.492 | -- | -- | -- | -- | -0.733 | -- | -- | -- | -- | -- |
| 174.27 | 0.618 | 6.29 | -- | 0.657 | -- | -- | -- | -0.786 | 10.6 | -- | -- | -- | -- |
| 165.46 | 0.599 | 6.25 | -- | -- | -0.858 | -- | -- | -0.536 | -- | 22.14 | 816 | -- | -- |
| 200.76 | 0.661 | 6.31 | -- | -- | -- | -- | -- | -0.787 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.62 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 4 | 127.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 5 | 127.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 6 | 128.07 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 8 | 128.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 9 | 128.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 10 | 128.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 12 | 128.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 13 | 128.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 16 | 128.81 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 18 | 129.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 22 | 129.40 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 38 | 130.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 39 | 130.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 44 | 130.88 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 45 | 130.88 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 47 | 130.95 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 56 | 131.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 57 | 131.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 76 | 131.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 78 | 132.10 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 83 | 132.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 92 | 132.70 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 96 | 132.94 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 98 | 132.98 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 102 | 133.10 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 106 | 133.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 115 | 133.36 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 135 | 133.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 137 | 133.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 138 | 133.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 140 | 134.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 152 | 134.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 172 | 134.82 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 177 | 134.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 184 | 135.05 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 186 | 135.08 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 201 | 135.31 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 209 | 135.43 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 222 | 135.53 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 248 | 135.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 273 | 135.92 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 281 | 135.97 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 285 | 136.00 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 289 | 136.02 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 310 | 136.11 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 311 | 136.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 316 | 136.16 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 322 | 136.17 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 325 | 136.19 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 334 | 136.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 335 | 136.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 374 | 136.39 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 384 | 136.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 386 | 136.41 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 400 | 136.47 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 429 | 136.57 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 8 |
| 437 | 136.59 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 447 | 136.62 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 448 | 136.62 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 449 | 136.62 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 464 | 136.65 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 487 | 136.71 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 492 | 136.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 493 | 136.72 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 11 | 3 |
| 525 | 136.81 | temperature | 25.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 547 | 136.86 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 18 |
| 563 | 136.90 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 608 | 137.00 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 609 | 137.00 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 610 | 137.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 618 | 137.03 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 623 | 137.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 644 | 137.10 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 648 | 137.12 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 656 | 137.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 668 | 137.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 683 | 137.21 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 697 | 137.24 | temperature | 25.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 706 | 137.26 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 712 | 137.27 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 721 | 137.29 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 771 | 137.39 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 785 | 137.42 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 840 | 137.53 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 855 | 137.55 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 858 | 137.55 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 6 |
| 885 | 137.60 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 897 | 137.62 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 947 | 137.70 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 995 | 137.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |