Os08g0369600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cysteine-rich polycomb-like protein.
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Os08g0369600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cysteine-rich polycomb-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 395.64 | 0.935 | 5.04 | -1.74 | 0.908 | -3.39 | -0.26 | 0.542 | -0.75 | 4.22 | 30.38 | 96 | -- | -- |
| 395.9 | 0.927 | 5.03 | -1.65 | 0.914 | -3.39 | -0.0887 | -- | -0.736 | 4.22 | 30.21 | 97 | -- | -- |
| 395.77 | 0.927 | 5.04 | -1.73 | 0.92 | -3.45 | -- | 0.551 | -0.735 | 4.27 | 30.86 | 95 | -- | -- |
| 395.93 | 0.927 | 5.03 | -1.65 | 0.914 | -3.39 | -- | -- | -0.734 | 4.25 | 30.23 | 97 | -- | -- |
| 427.19 | 0.963 | 5 | -1.51 | -- | -2.76 | -- | 0.885 | -0.535 | -- | 32.96 | 12 | -- | -- |
| 544.12 | 1.09 | 4.89 | -0.84 | 0.372 | -- | 0.482 | -- | -0.09 | 11.8 | -- | -- | -- | -- |
| 545.11 | 1.09 | 4.89 | -0.822 | 0.371 | -- | -- | -- | -0.0884 | 11.6 | -- | -- | -- | -- |
| 427.75 | 0.963 | 5 | -1.39 | -- | -2.57 | -- | -- | -0.535 | -- | 31 | 19 | -- | -- |
| 459.44 | 0.998 | 4.96 | -- | 0.668 | -2.73 | -- | -- | -0.401 | 4.7 | 31.18 | 91 | -- | -- |
| 553.77 | 1.1 | 4.9 | -0.832 | -- | -- | -- | -- | -0.0927 | -- | -- | -- | -- | -- |
| 562.9 | 1.11 | 4.87 | -- | 0.381 | -- | -- | -- | 0.00306 | 11.7 | -- | -- | -- | -- |
| 475.14 | 1.02 | 4.94 | -- | -- | -2.54 | -- | -- | -0.285 | -- | 41.2 | 6 | -- | -- |
| 572.03 | 1.12 | 4.88 | -- | -- | -- | -- | -- | -0.000391 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 392.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 2 | 393.46 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 5 | 394.14 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 6 | 394.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 9 | 395.82 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 10 | 396.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 12 | 396.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 14 | 396.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 15 | 396.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 17 | 396.90 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 26 | 397.82 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 28 | 397.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 29 | 397.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 38 | 398.55 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 72 | 402.30 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 18 |
| 76 | 402.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 98 | 404.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 15 |
| 103 | 405.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 106 | 405.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 111 | 405.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 114 | 405.96 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 141 | 407.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 154 | 408.19 | temperature | 30 | 30 | < th | dose dependent | sin | 22 | NA |
| 157 | 408.36 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 180 | 409.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 182 | 409.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 191 | 409.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 218 | 410.99 | temperature | 15 | 720 | > th | dose dependent | sin | 4 | NA |
| 250 | 412.24 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 284 | 413.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 313 | 414.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 17 |
| 318 | 414.36 | temperature | 10 | 10 | > th | dose dependent | sin | 22 | NA |
| 340 | 414.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 341 | 414.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 385 | 415.48 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 412 | 416.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 505 | 417.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 519 | 417.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 9 |
| 528 | 417.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 549 | 417.63 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 601 | 418.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 605 | 418.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 609 | 418.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 649 | 418.64 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 663 | 418.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 11 |
| 687 | 418.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 689 | 418.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 699 | 418.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 705 | 418.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 738 | 419.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 800 | 419.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 820 | 419.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 909 | 420.13 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 958 | 420.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |