BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0745700 Os01g0745700|AK121896
(387 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0745700 Similar to GATA transcription factor 3 (AtGATA-3) 489 e-138
Os05g0520300 Similar to GATA transcription factor 3 (AtGATA-3) 258 7e-69
Os10g0557600 Zinc finger, GATA-type domain containing protein 134 9e-32
Os02g0645600 Similar to AG-motif binding protein-3 122 4e-28
Os04g0539500 Zinc finger, GATA-type domain containing protein 120 2e-27
Os12g0624900 Similar to GATA transcription factor 2 (AtGATA-2) 115 4e-26
Os03g0145200 Zinc finger, GATA-type domain containing protein 111 8e-25
Os12g0168800 Similar to AG-motif binding protein-2 107 1e-23
Os11g0187200 103 2e-22
Os03g0130600 97 1e-20
Os10g0458800 96 4e-20
>Os01g0745700 Similar to GATA transcription factor 3 (AtGATA-3)
Length = 387
Score = 489 bits (1260), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/387 (66%), Positives = 257/387 (66%)
Query: 1 MEVTAEFXXXXXXXXXXREKKALQQGCGDHFAVDDLLVLPYXXXXXXXXXXXXXXXXXXX 60
MEVTAEF REKKALQQGCGDHFAVDDLLVLPY
Sbjct: 1 MEVTAEFGGAYYGGAAGREKKALQQGCGDHFAVDDLLVLPYGEEDETTREGEATGGKEEA 60
Query: 61 XXXXNASADSSTITALDSCSNSFGLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFAT 120
NASADSSTITALDSCSNSFGLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFAT
Sbjct: 61 AGFGNASADSSTITALDSCSNSFGLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFAT 120
Query: 121 EDLQKLQLISGIPSGGFSTXXXXXXXXXXXXXXXXXXXXXGGFLPEAPVPXXXXXXXXXX 180
EDLQKLQLISGIPSGGFST GGFLPEAPVP
Sbjct: 121 EDLQKLQLISGIPSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRA 180
Query: 181 XPGNWSSRLLVLXXXXXXXXXXXXXXXXXXESGVSAHXXXXXXXXXXXXXXXXXXXXXXX 240
PGNWSSRLLVL ESGVSAH
Sbjct: 181 APGNWSSRLLVLPPPPASPPSPASMAISPAESGVSAHAFPIKKPSKPAKKKDAPAPPAQA 240
Query: 241 QLSSVPVHXXXXXXXXXXXXXRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVP 300
QLSSVPVH RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVP
Sbjct: 241 QLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVP 300
Query: 301 EYRPAASPTFMVSKHSNSHRKVLELRRQKEMXXXXXXXXXXXVAAAGGVGSLMHMQSSML 360
EYRPAASPTFMVSKHSNSHRKVLELRRQKEM VAAAGGVGSLMHMQSSML
Sbjct: 301 EYRPAASPTFMVSKHSNSHRKVLELRRQKEMHQQTPHHHQPQVAAAGGVGSLMHMQSSML 360
Query: 361 FDGVSPVVSGDDFLIHHHLRTDFRPPI 387
FDGVSPVVSGDDFLIHHHLRTDFRPPI
Sbjct: 361 FDGVSPVVSGDDFLIHHHLRTDFRPPI 387
>Os05g0520300 Similar to GATA transcription factor 3 (AtGATA-3)
Length = 386
Score = 258 bits (658), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 192/379 (50%), Gaps = 39/379 (10%)
Query: 26 GCGDHFAVDDLLVLPYXXXXXXXXXXXXXXXXXXXXXXX------------NASADSSTI 73
G GD F VDDLL LP NASADSST+
Sbjct: 23 GSGDMFLVDDLLDLPCDEEEEETGLCGAYGGGGAGLGAGVVGGGGDDRAAGNASADSSTV 82
Query: 74 TALDSCSNSF-GLADGDFPGELCEPYDQLAELEWLSNYMNEGDDAFATEDLQKLQLISGI 132
TA+DSCSNSF GLADGDF G LCEPY+QLAELEW+S YM G++ TEDL+KLQLISGI
Sbjct: 83 TAVDSCSNSFSGLADGDFSGGLCEPYEQLAELEWVSTYM--GEETLPTEDLRKLQLISGI 140
Query: 133 PSGGFSTXXXXXXXXXXXXXXXXXXXXXGGFLPEAPVPXXXXXXXXXXXPGNWSSRLLVL 192
G EAPVP P +WSSRL+VL
Sbjct: 141 ------PAAPRAPPALAVSAVQLPAGGAGALPTEAPVPGKARSKRSRVAPCSWSSRLMVL 194
Query: 193 XXXXXXXXXXXXXXXXXXESGVSAHXXXXXXXXXXXXXXXXXXXXXXXQLSSVPVHXXXX 252
ESG +A ++
Sbjct: 195 PPPPASPPSPASAVISPSESGTAAPAFPAKKAAKSAKKKDGPSPAPAPNAAAQ------- 247
Query: 253 XXXXXXXXXRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMV 312
RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF+V
Sbjct: 248 ----AAAEGRRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVV 303
Query: 313 SKHSNSHRKVLELRRQKEMXXXXXXXX---XXXVAAAGGVGSLMHMQSSMLFDG---VSP 366
SKHSNSHRKV+ELRRQKEM G G L+H+ S +LFDG +P
Sbjct: 304 SKHSNSHRKVVELRRQKEMQLLHHHQQPPPHVGAGGGGAAGGLLHVTSPLLFDGPTSSAP 363
Query: 367 VVSG-DDFLIHHHLRTDFR 384
+ +G D+FLIH+ + D+R
Sbjct: 364 LFAGADEFLIHNRISPDYR 382
>Os10g0557600 Zinc finger, GATA-type domain containing protein
Length = 260
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 57/70 (81%), Positives = 68/70 (97%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
RRC HC ++KTPQWRTGP+GPKTLCNACGVR+KSGRL+PEYRPAASPTF++++HSNSHRK
Sbjct: 149 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRK 208
Query: 322 VLELRRQKEM 331
V+ELRRQKE+
Sbjct: 209 VMELRRQKEL 218
>Os02g0645600 Similar to AG-motif binding protein-3
Length = 387
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 59/69 (85%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
RRC HC KTPQWR GP G KTLCNACGVRYKSGRL+PEYRPA SPTF+ S HSNSHRK
Sbjct: 304 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSSLHSNSHRK 363
Query: 322 VLELRRQKE 330
VLE+RR+KE
Sbjct: 364 VLEMRRKKE 372
>Os04g0539500 Zinc finger, GATA-type domain containing protein
Length = 198
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 60/70 (85%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
RRC HC KTPQWR GP G KTLCNACGVRYKSGRL+PEYRPA SPTF+ + HSNSHRK
Sbjct: 111 RRCSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRLLPEYRPACSPTFVSAIHSNSHRK 170
Query: 322 VLELRRQKEM 331
VLE+RR+KE+
Sbjct: 171 VLEMRRKKEV 180
>Os12g0624900 Similar to GATA transcription factor 2 (AtGATA-2)
Length = 309
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 58/65 (89%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
+RC HC + KTPQWRTGP+GPKTLCNACGVR+KSGRL+PEYRPA SPTF+ HSNSH+K
Sbjct: 237 KRCTHCLSYKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPANSPTFVSDIHSNSHKK 296
Query: 322 VLELR 326
V++LR
Sbjct: 297 VMQLR 301
>Os03g0145200 Zinc finger, GATA-type domain containing protein
Length = 219
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 54/67 (80%)
Query: 264 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRKVL 323
C HC D+TPQWR GP GP+TLCNACGVR+KSGRL PEYRPA SPTF HSNSHR+V+
Sbjct: 124 CTHCAVDETPQWRLGPDGPRTLCNACGVRFKSGRLFPEYRPANSPTFSPLLHSNSHRRVM 183
Query: 324 ELRRQKE 330
E+R Q E
Sbjct: 184 EMRLQSE 190
>Os12g0168800 Similar to AG-motif binding protein-2
Length = 414
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 75/138 (54%), Gaps = 29/138 (21%)
Query: 264 CLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRKVL 323
C+HC + +TPQWR GP G TLCNACGVRY+ GRL+PEYRP SPTF S H+ +HR+VL
Sbjct: 279 CVHCGSTETPQWREGPTGRGTLCNACGVRYRQGRLLPEYRPKGSPTFSPSVHAANHRQVL 338
Query: 324 ELRRQKEMXXXXXXXXXXXVAAA------------------------GGVGSLMHMQSSM 359
ELRRQ+ V+AA GG S + ++
Sbjct: 339 ELRRQQRQSTNPSTPPPPPVSAAEPIPDEQKEEVVSVPVAAAAPATDGGAASSL---DAL 395
Query: 360 LFDGVSP--VVSGDDFLI 375
L DG S +V GDDFL+
Sbjct: 396 LLDGPSAPLIVDGDDFLV 413
>Os11g0187200
Length = 431
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
RRC HC T +TPQWR GP GP TLCNACG+R K RL+PEYRP+ SP+F +HSN HRK
Sbjct: 361 RRCSHCGTSETPQWRMGPDGPGTLCNACGIRSKMDRLLPEYRPSTSPSFNGDEHSNRHRK 420
Query: 322 VLELRRQK 329
VL+LR +K
Sbjct: 421 VLKLREKK 428
>Os03g0130600
Length = 271
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
+RC HC+T +TPQWR GP GP TLCNACG+RY+ L+PEYRP+ SP F +SN HRK
Sbjct: 186 KRCGHCQTTETPQWRVGPDGPSTLCNACGIRYRIDHLLPEYRPSTSPGFGSDGYSNRHRK 245
Query: 322 VLELRRQKE 330
V++LR +K
Sbjct: 246 VVKLREKKR 254
>Os10g0458800
Length = 528
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%)
Query: 263 RCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRKV 322
+C HC T +TPQWR GP G +TLCNAC +RY+SG+LVPEYRP SPTF HSN H +V
Sbjct: 64 QCRHCGTTETPQWRHGPEGHRTLCNACSMRYRSGKLVPEYRPLRSPTFSPELHSNRHHRV 123
Query: 323 LELRRQ 328
L+LRR+
Sbjct: 124 LQLRRR 129
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 262 RRCLHCETDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMVSKHSNSHRK 321
RRC HC T KTP W +GP LCNACG +Y+ GRLVPEYRP PTF HSN+H
Sbjct: 453 RRCTHCGTTKTPAWLSGPDSRGKLCNACGKQYRKGRLVPEYRPLNCPTFSPELHSNAH-- 510
Query: 322 VLELRRQKE 330
RR++E
Sbjct: 511 --AHRRRRE 517
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,715,116
Number of extensions: 311110
Number of successful extensions: 679
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 672
Number of HSP's successfully gapped: 14
Length of query: 387
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 284
Effective length of database: 11,657,759
Effective search space: 3310803556
Effective search space used: 3310803556
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)