BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0663300 Os01g0663300|AK071667
(403 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0663300 Similar to (1-4)-beta-mannan endohydrolase-lik... 727 0.0
Os02g0766900 Similar to (1-4)-beta-mannan endohydrolase pre... 417 e-117
Os03g0828500 Similar to (1-4)-beta-mannan endohydrolase pre... 358 3e-99
Os01g0746700 Glycoside hydrolase, family 5 protein 342 2e-94
Os05g0319100 328 5e-90
Os12g0117250 Glycoside hydrolase, family 5 protein 303 1e-82
Os11g0118200 Hypothetical protein 209 3e-54
Os03g0828300 Similar to (1-4)-beta-mannan endohydrolase-lik... 152 6e-37
Os06g0311600 Conserved hypothetical protein 82 7e-16
>Os01g0663300 Similar to (1-4)-beta-mannan endohydrolase-like protein
Length = 403
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/403 (89%), Positives = 360/403 (89%)
Query: 1 MRLLGAHRXXXXXXXXXXXXXIHXXXXXXXXXXXXXFVRAQGTRFVLDGNPYYANGFNAY 60
MRLLGAHR IH FVRAQGTRFVLDGNPYYANGFNAY
Sbjct: 1 MRLLGAHRAALLVLACVVVVVIHGLGEAEALGGGGGFVRAQGTRFVLDGNPYYANGFNAY 60
Query: 61 WLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGNALQLSPGNYNENTFKGLD 120
WLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGNALQLSPGNYNENTFKGLD
Sbjct: 61 WLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGGGNALQLSPGNYNENTFKGLD 120
Query: 121 FVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNH 180
FVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNH
Sbjct: 121 FVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQGIGSDDEFFTNPVVKGFYKNH 180
Query: 181 VKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNH 240
VKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNH
Sbjct: 181 VKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNH 240
Query: 241 MLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQ 300
MLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQ
Sbjct: 241 MLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANNQVPGIDFATVHSYPDQWLSGKDDQ 300
Query: 301 AQLGFMGRWLDAHIADALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVF 360
AQLGFMGRWLDAHIADALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVF
Sbjct: 301 AQLGFMGRWLDAHIADALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVF 360
Query: 361 GETPSTTGVITTNSRRLRFLSXXXXXXXXXXXXXXXXXHNGGK 403
GETPSTTGVITTNSRRLRFLS HNGGK
Sbjct: 361 GETPSTTGVITTNSRRLRFLSKAFARARQAQPARGKGRHNGGK 403
>Os02g0766900 Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)
Length = 407
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/374 (55%), Positives = 254/374 (67%), Gaps = 36/374 (9%)
Query: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
F RA GTRF + G P+Y+NGFNAYWLM +A+DP R K + L +AA T+ RTWAFS
Sbjct: 39 FARASGTRFTVGGRPFYSNGFNAYWLMYMASDPGDRSKAAGVLQQAASLRATLVRTWAFS 98
Query: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
DGG LQ SPG YNE+ F GLDFV++EA+K G+ +ILSLV+N+D FGG+KQYV WAR
Sbjct: 99 DGGY-RPLQKSPGVYNEDMFMGLDFVIAEAKKRGLYLILSLVNNWDGFGGKKQYVQWARD 157
Query: 157 QGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSD 216
QG +GSDD+FF + V K FYKNH VLTR N ITGVAY+DDPTI AWEL+NEPRCQSD
Sbjct: 158 QGHNLGSDDDFFRSDVTKQFYKNH--AVLTRVNKITGVAYKDDPTIFAWELINEPRCQSD 215
Query: 217 LSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIANN 276
LSG+T+Q+W+TEMA +VKS+D NHM+E+GLEGFYG S NP GY +GTDFIANN
Sbjct: 216 LSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFYGESMHKNF---NP-GYTVGTDFIANN 271
Query: 277 QVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHI---------------------- 314
VP +DFAT+HSYPDQW+SG Q+ FM +W+ HI
Sbjct: 272 LVPAVDFATIHSYPDQWVSGASSDEQVAFMRKWMADHIRDSAAVLRKPLLVTEFGWSARS 331
Query: 315 -------ADALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGETPSTT 367
DA + TVY +Y SAR GGA GGLFWQ++ PGM+S+ DGYEVV + ST
Sbjct: 332 NGYTVAARDAYFRTVYDAVYASAREGGACAGGLFWQVMAPGMESWTDGYEVVLERSKSTA 391
Query: 368 GVITTNSRRLRFLS 381
V+ R+ LS
Sbjct: 392 DVVAHQCARIAGLS 405
>Os03g0828500 Similar to (1-4)-beta-mannan endohydrolase precursor (EC 3.2.1.78)
Length = 461
Score = 358 bits (920), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/382 (49%), Positives = 242/382 (63%), Gaps = 40/382 (10%)
Query: 37 FVRAQGTRFVLD-GNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAF 95
V GT+FV+D G + +GFNAYWLM++AADP+ RG V+ A +A+ HGL +ARTWAF
Sbjct: 23 MVAVDGTQFVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAF 82
Query: 96 SDGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWAR 155
SDGG LQ SPG YNE F+GLDFV++EAR++GI ++L L +N+D+FGG++QYV WA
Sbjct: 83 SDGGD-QPLQSSPGVYNETMFQGLDFVIAEARRHGIYLLLCLTNNFDNFGGKRQYVRWAG 141
Query: 156 AQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQS 215
G + SDD+FFT+ +VK ++KNHVKTVLTR NT+TGVAY+DDPTI AWELMNEPRC +
Sbjct: 142 DAGHNLTSDDDFFTSTIVKSYFKNHVKTVLTRVNTLTGVAYKDDPTIFAWELMNEPRCYA 201
Query: 216 DLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGYQLGTDFIAN 275
D +G VQ+W+ EMA +VKS+D H++ GLEGFYGA +NP G GT+++A
Sbjct: 202 DPTGAMVQAWVEEMAPYVKSVDGRHLVTPGLEGFYGAGEHES-KELNPWGIYYGTNYVAT 260
Query: 276 NQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADA--------LYGTVYAK-- 325
++ +DFAT+H YPD WL G Q F W +HI DA L T Y K
Sbjct: 261 HRTAAVDFATIHLYPDVWLWGSSADEQATFFRNWTRSHI-DATAAYLGMPLLVTEYGKFL 319
Query: 326 ---------------------IYESARRGGATVGGLFWQLL-----VPGMDSYRDGYEVV 359
IY SA RGG VGG FWQLL V GMDS RDGYE++
Sbjct: 320 WKEVGANKAQRNYFLDLVLDAIYASASRGGPLVGGAFWQLLLDGDIVAGMDSLRDGYEII 379
Query: 360 FGETPSTTGVITTNSRRLRFLS 381
E +I +S +L L+
Sbjct: 380 LAEDSRAASIIGEHSEQLAALN 401
>Os01g0746700 Glycoside hydrolase, family 5 protein
Length = 445
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/374 (47%), Positives = 237/374 (63%), Gaps = 34/374 (9%)
Query: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
FV +G R LDG P+Y NG+N+YWLM LA +P+ R +VS+ A GLTV RTWAF+
Sbjct: 54 FVERRGKRLFLDGRPFYINGWNSYWLMDLAVEPNTRPRVSSMFRTAVSMGLTVCRTWAFN 113
Query: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
DG NALQLSPG+++E FK LD V++EA ++G+++ILSL +N D++GG++QYV WA
Sbjct: 114 DGSY-NALQLSPGHFDERVFKALDRVVAEASEHGVRLILSLANNLDAYGGKRQYVRWAWE 172
Query: 157 QGQGI-GSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQS 215
+G G+ S+D FF +P ++ ++K ++KT+L RKN +TG+ YRDDPTILAWELMNEPRC S
Sbjct: 173 EGVGLTASNDSFFFDPAIRDYFKVYLKTLLMRKNHLTGLEYRDDPTILAWELMNEPRCTS 232
Query: 216 DLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGY---QLGTDF 272
D SG T+Q W+ EM+A+VKSID+ H+L VG EGFYG +S +NP + G DF
Sbjct: 233 DPSGDTLQRWMEEMSAYVKSIDKKHLLTVGTEGFYGPTSSQEKLNINPGEWFPNNYGADF 292
Query: 273 IANNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIA----------------- 315
I N+++ IDFA+VH YPD WL +L FM RW+ AH+
Sbjct: 293 IRNSKIQDIDFASVHVYPDNWLQHASLDEKLKFMTRWITAHVEDGDGELEKPVLVTEFGL 352
Query: 316 ------------DALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVFGET 363
D LY VY ++ SARRGGA G L WQL GM+ Y DG+ +V E
Sbjct: 353 SHQVEGFEDAHRDVLYRAVYDIVHGSARRGGAAGGALVWQLAAEGMEEYHDGFSIVPSER 412
Query: 364 PSTTGVITTNSRRL 377
PS +I S RL
Sbjct: 413 PSMMRLIKEQSCRL 426
>Os05g0319100
Length = 491
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/378 (50%), Positives = 239/378 (63%), Gaps = 38/378 (10%)
Query: 37 FVRAQGTRFVLDG-NPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAF 95
VR +G +FV+ G P+Y NGFN YWLM+LA DPS RGKV+ +AA GLTV RTWAF
Sbjct: 77 MVRTRGAQFVVGGGRPFYVNGFNTYWLMVLAVDPSTRGKVTEVFRQAAAVGLTVCRTWAF 136
Query: 96 SDGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWAR 155
+DGG ALQ SPG Y+E FK LDFV+SEARK+ I++IL L++N+D +GG+ QYV WA+
Sbjct: 137 NDGGW-RALQKSPGVYDEEVFKALDFVVSEARKHKIRLILPLINNWDDYGGKAQYVRWAQ 195
Query: 156 AQGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQS 215
A G G+D FF++ V+G++K+HV VLTR N TGVAYRDDPTI+AWELMNEPRC S
Sbjct: 196 AAAAGAGAD-AFFSDETVRGYFKSHVTAVLTRVNAYTGVAYRDDPTIMAWELMNEPRCAS 254
Query: 216 DLSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSG--YQLGTDFI 273
D +G T+Q+WI EMA HVKS+D H+L VG EGFYG SSP VNP+ G DF+
Sbjct: 255 DPTGDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFYGPSSPPARLRVNPNADVALAGADFV 314
Query: 274 ANNQVPGIDFATVHSYPDQWL-SGKDDQAQLGFMGRWLDAHIA----------------- 315
N++V G+DFA+VH YPD WL +G +AQL F W++AHIA
Sbjct: 315 RNHRVLGVDFASVHVYPDTWLPAGATKEAQLRFATSWVEAHIADAEGALGGMPVLFAEFG 374
Query: 316 ---------------DALYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRDGYEVVF 360
DA VY + S RRGG G L WQ+ G D DGY VV
Sbjct: 375 VSTRGARAAFNATSRDAFIEAVYGAMLRSTRRGGGGAGALLWQVFPEGTDYMDDGYAVVL 434
Query: 361 GETPSTTGVITTNSRRLR 378
+T G++ +SRRL+
Sbjct: 435 PRAAATAGIVAAHSRRLQ 452
>Os12g0117250 Glycoside hydrolase, family 5 protein
Length = 360
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 212/349 (60%), Gaps = 33/349 (9%)
Query: 37 FVRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFS 96
V GT+ G P+ +GFN YWLM AAD + R +V+AA+ EAA GL V RTWAFS
Sbjct: 11 MVECSGTQLWASGRPFIIHGFNTYWLMSFAADQATRPRVTAAIAEAAEAGLNVCRTWAFS 70
Query: 97 DGGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARA 156
DGG ALQ P +Y+E+ F+ LDFV+SEA+++ +++ILSL +N++ +GG+ QYV W +
Sbjct: 71 DGGY-RALQTVPFHYDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGKAQYVRWGKE 129
Query: 157 QGQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSD 216
G + S+D+FF++P +K +YK V+ V+TR NT+T Y+DDPTILAWEL+NEPRC SD
Sbjct: 130 AGLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSD 189
Query: 217 LSGRTVQSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGY--QLGTDFIA 274
SG T+Q+WI EMA++VKSID H+LE+G+EGFYG S+P + VNP Y GTDFI
Sbjct: 190 PSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTP-ELLPVNPDEYSGHAGTDFIR 248
Query: 275 NNQVPGIDFATVHSYPDQWLSGKDDQAQLGFMGRWLDAHIADA----------------- 317
N+Q PGID A++H Y D WL + L F+ +W+ HI DA
Sbjct: 249 NHQAPGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIVVGEFGVSV 308
Query: 318 ------------LYGTVYAKIYESARRGGATVGGLFWQLLVPGMDSYRD 354
TVY S + G G L WQL G + D
Sbjct: 309 KDGKFGNEFREDFMKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDD 357
>Os11g0118200 Hypothetical protein
Length = 202
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 137/190 (72%), Gaps = 4/190 (2%)
Query: 38 VRAQGTRFVLDGNPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSD 97
V +GT+ G P+ +GFN YWLM AAD + R +V+AA+ EA GL V TWAFSD
Sbjct: 12 VERRGTQLWASGRPFIIHGFNTYWLMSFAADQATRLRVTAAIAEA---GLNVCCTWAFSD 68
Query: 98 GGGGNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQ 157
GG ALQ +P +Y+E+ F+ LDFV+SEAR++ +++ILSL +N++ +GG+ QYV W +
Sbjct: 69 GGY-RALQTAPFHYDEDVFRALDFVVSEARRHNMRLILSLCNNWEDYGGKAQYVRWGKEA 127
Query: 158 GQGIGSDDEFFTNPVVKGFYKNHVKTVLTRKNTITGVAYRDDPTILAWELMNEPRCQSDL 217
G + S+D+FF++P +K +YK V+ V+TR NT+T Y+DDPTILAWEL+NEPRC SD
Sbjct: 128 GLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWELINEPRCPSDP 187
Query: 218 SGRTVQSWIT 227
SG T+Q +IT
Sbjct: 188 SGDTLQVFIT 197
>Os03g0828300 Similar to (1-4)-beta-mannan endohydrolase-like protein
Length = 189
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
Query: 42 GTRFVLDG-NPYYANGFNAYWLMLLAADPSQRGKVSAALGEAAGHGLTVARTWAFSDGGG 100
GT+FV++G Y +GFNAYWLM++A+DP++R V AA +A+ GL +ARTWAFSDGG
Sbjct: 37 GTQFVVEGGRTIYFSGFNAYWLMMMASDPARRAAVVAAFAQASSRGLNLARTWAFSDGGD 96
Query: 101 GNALQLSPGNYNENTFKGLDFVLSEARKYGIKVILSLVDNYDSFGGRKQYVNWARAQGQG 160
LQ SPG Y+E F+GLDFV++EAR++GI ++L L +N+D FGG++QYV WA G
Sbjct: 97 -QPLQSSPGVYDEAMFQGLDFVIAEARRHGIYLLLCLTNNFDDFGGKRQYVRWAADAGHN 155
Query: 161 IGSDDEFFTNPVVKGFYKNHVKTVLTR 187
+ + D+FFT+ VVK +YKNHVK R
Sbjct: 156 LTAGDDFFTSSVVKSYYKNHVKVRHNR 182
>Os06g0311600 Conserved hypothetical protein
Length = 119
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 223 QSWITEMAAHVKSIDRNHMLEVGLEGFYGASSPSRIAAVNPSGY--QLGTDFIANNQVPG 280
Q+WI EMAA+VKS+D NH++ VG EGFYG R+ VNP + L +DFI N+ V
Sbjct: 1 QAWIAEMAAYVKSLDTNHLVTVGTEGFYGPGIAERL-GVNPGEWAASLCSDFIQNSAVEH 59
Query: 281 IDFATVHSYPDQW 293
IDFA+VH+YPD W
Sbjct: 60 IDFASVHAYPDSW 72
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,682,278
Number of extensions: 600613
Number of successful extensions: 1542
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1521
Number of HSP's successfully gapped: 9
Length of query: 403
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 300
Effective length of database: 11,657,759
Effective search space: 3497327700
Effective search space used: 3497327700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)