BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0560000 Os01g0560000|AK105974
(442 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0560000 Similar to Auxin amidohydrolase 778 0.0
Os01g0706900 Similar to Auxin amidohydrolase 476 e-134
Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-... 398 e-111
Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 375 e-104
Os04g0521800 Peptidase M20 family protein 355 4e-98
Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 255 4e-68
Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.... 200 2e-51
Os07g0249900 Peptidase M20 family protein 106 4e-23
Os07g0249700 Peptidase M20 family protein 69 6e-12
>Os01g0560000 Similar to Auxin amidohydrolase
Length = 442
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/402 (95%), Positives = 383/402 (95%)
Query: 41 KEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHXXXXXXXXXXXXXX 100
KEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRH
Sbjct: 41 KEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHPFAVTGVVATVGTG 100
Query: 101 XXXXXALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKG 160
ALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKG
Sbjct: 101 GPPFVALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKG 160
Query: 161 TVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFE 220
TVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFE
Sbjct: 161 TVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFE 220
Query: 221 AVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVI 280
AVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVI
Sbjct: 221 AVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVI 280
Query: 281 PDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAG 340
PDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAG
Sbjct: 281 PDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAG 340
Query: 341 LHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHS 400
LHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHS
Sbjct: 341 LHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHS 400
Query: 401 PYFTINEDALPYGAALQASLAARYLLEHQPPTTGKAKAHDEL 442
PYFTINEDALPYGAALQASLAARYLLEHQPPTTGKAKAHDEL
Sbjct: 401 PYFTINEDALPYGAALQASLAARYLLEHQPPTTGKAKAHDEL 442
>Os01g0706900 Similar to Auxin amidohydrolase
Length = 456
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/404 (58%), Positives = 294/404 (72%), Gaps = 4/404 (0%)
Query: 41 KEAEFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHXXXXXXXXXXXXXX 100
+ EFA WM G+R IHE PEL +EE TS LVR ELDA+G+ YRH
Sbjct: 55 RRPEFAAWMAGVRWAIHERPELAFEEIETSRLVRAELDAMGVAYRHPVAGTGVVATVGTG 114
Query: 101 XXXXXALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKG 160
ALRADMDALPMQE V+WEHKSKV KMH CGHDAH MLLG+ARILQE R EL+G
Sbjct: 115 RPPFVALRADMDALPMQEEVQWEHKSKVAMKMHACGHDAHTTMLLGAARILQERRHELQG 174
Query: 161 TVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFE 220
TVVL+FQP EE G GA++M++ GAV+N+EAIFG HV+ +P GVV SRPGP++AG GFFE
Sbjct: 175 TVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFE 234
Query: 221 AVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVI 280
AVI+GKGGHAA PH ++DPILAAS V+++LQ LVSREADPL++QVVTV +F G A NVI
Sbjct: 235 AVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVI 294
Query: 281 PDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAG 340
P+S+TIGGTFR F E F +LK+RIEEVIV+Q++V RC A VDF RP PPTINSA
Sbjct: 295 PESITIGGTFRVFSNEGFLRLKRRIEEVIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAA 354
Query: 341 LHDFFVKVASEMVGPKN--VRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPH 398
LH F VA+E +G + +P MG+EDFA +++A+PA+++YF+G+ NE G
Sbjct: 355 LHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLA 414
Query: 399 HSPYFTINEDALPYGAALQASLAARYLLEHQPPTTGKAKAHDEL 442
HSP+F +++ ALPYGAAL ASLA RYL E + G + H+EL
Sbjct: 415 HSPHFRVDDAALPYGAALHASLAMRYLDERR--REGGSHPHEEL 456
>Os06g0691400 Similar to IAA-amino acid conjugate hydrolase-like protein
(Fragment)
Length = 510
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/393 (52%), Positives = 261/393 (66%), Gaps = 17/393 (4%)
Query: 44 EFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHXXXXXXXXXXXXXXXXX 103
E A W+ +RRRIHE PEL YEE TS LVR ELDA+G+ +RH
Sbjct: 107 ETAAWLRAVRRRIHERPELAYEEVETSRLVRDELDAMGVGFRHPVARTGVVANIGTGRPP 166
Query: 104 XXALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVV 163
ALRADMDALP+QE+VEWEHKSK PGKMH CGHDAHVAMLLG+A+IL+ L+GTV
Sbjct: 167 VVALRADMDALPIQEAVEWEHKSKNPGKMHACGHDAHVAMLLGAAKILKAREHHLRGTVR 226
Query: 164 LVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVI 223
L+FQPAEE G GAK+MI+ GA+E++EAIF VHV+ P V+ SR GP++AG GFF+AVI
Sbjct: 227 LLFQPAEESGAGAKRMIEGGALEDVEAIFAVHVSHQHPTSVIGSRTGPLLAGCGFFKAVI 286
Query: 224 SGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGG--------G 275
G + D +LAA++ I+SLQ +VSREADPLDSQVV+V G
Sbjct: 287 HGG-------RRSGDAVLAAASTIISLQSIVSREADPLDSQVVSVAMVNGSDHPAATARA 339
Query: 276 AFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPT 335
A + +GGTFRAF SF Q+++RIEEVI +QA V C A VDF + ++ F+PPT
Sbjct: 340 AAAEEEEEFVLGGTFRAFSNASFYQVRRRIEEVITAQARVHGCEAAVDFFE-NQSFYPPT 398
Query: 336 INSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQ 395
+N A ++ VA E++G + RD P+MGAEDF+FY+ +PA +YY +G+ NET G
Sbjct: 399 VNDARMYAHVKAVAGELLGAGSYRDVPPMMGAEDFSFYSQVVPAGFYY-IGVRNETLGSV 457
Query: 396 APHHSPYFTINEDALPYGAALQASLAARYLLEH 428
HSPYF I+ED LP GAA A++A RYL H
Sbjct: 458 HTGHSPYFMIDEDVLPTGAAFHAAIAERYLANH 490
>Os03g0836900 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 414
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/391 (51%), Positives = 252/391 (64%), Gaps = 11/391 (2%)
Query: 44 EFAGWMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHXXXXXXXXXXXXXXXXX 103
EFAGW+ GLRRRIH++PEL ++E TS LVR ELDALG+ Y
Sbjct: 17 EFAGWLRGLRRRIHQHPELAFQEHRTSALVRAELDALGVAYVWPIAQTGVVATVAGAAGP 76
Query: 104 --XXALRADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGT 161
ALRADMDALP+QE VEWE KS GKMH CGHDAHVAMLL +A++LQ RD G
Sbjct: 77 GPVFALRADMDALPIQEMVEWEFKSLEDGKMHACGHDAHVAMLLVAAKLLQSRRDHFNGK 136
Query: 162 VVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEA 221
V LVFQPAE GG G ++ +G +++ + IF VHVA +P GVV SRPGP +AGS F A
Sbjct: 137 VKLVFQPAE-GGAGGYHVLKEGVLDDTQTIFAVHVATDLPAGVVGSRPGPFLAGSARFTA 195
Query: 222 VISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIP 281
I+GKGGHAA PH +DPI+AAS+ ++SLQQ+V+RE +PL VV+V +GG AFNVIP
Sbjct: 196 TITGKGGHAAEPHLAVDPIVAASSAVLSLQQIVARETNPLQGAVVSVTTIKGGEAFNVIP 255
Query: 282 DSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFL-DKDRPFFPPTINSAG 340
+SVT+GGT R+ + + L RI EVI QA+V RC A VDF+ DK RP +P T+N G
Sbjct: 256 ESVTLGGTLRSMTTDGLSYLMNRIREVIEGQAAVNRCTAAVDFMEDKLRP-YPATVNDEG 314
Query: 341 LHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYF-LGMYNETRGPQAPH- 398
++ VA M+G NV MGAEDF FYA IPA ++ +G G A
Sbjct: 315 MYAHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAETT 374
Query: 399 ----HSPYFTINEDALPYGAALQASLAARYL 425
HSP+F ++E+ALP GAA A++A YL
Sbjct: 375 KNQLHSPHFVVDEEALPVGAAFHAAVAIEYL 405
>Os04g0521800 Peptidase M20 family protein
Length = 426
Score = 355 bits (911), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 181/380 (47%), Positives = 235/380 (61%), Gaps = 2/380 (0%)
Query: 48 WMVGLRRRIHENPELGYEEFATSELVRRELDALGIPYRHXXXXXXXXXXXXXXXXXXXAL 107
WMVG+RRRIH +PEL + E TS LVR EL+ LG+ R AL
Sbjct: 36 WMVGVRRRIHAHPELAFREHHTSALVRDELERLGLTAR-AVAGTGVVADVGSGLPPVVAL 94
Query: 108 RADMDALPMQESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELKGTVVLVFQ 167
RADMDALP+QE VEWEHKSKV G MH CGHD H AMLLG+A++L E ++++KGTV L+FQ
Sbjct: 95 RADMDALPVQELVEWEHKSKVDGVMHACGHDVHTAMLLGAAKLLSERKEQIKGTVRLLFQ 154
Query: 168 PAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKG 227
PAEEGG GA MI DG ++ +EAIFG+HV +P GV+A+ GP A F+EA I GK
Sbjct: 155 PAEEGGAGASYMIKDGVLDGVEAIFGMHVDYRMPTGVIAAHAGPTQAAVCFYEAKIEGKT 214
Query: 228 GHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIG 287
G A PH +DPI+AAS VI+SLQQL+SRE DPL SQV++V +GG + P + G
Sbjct: 215 GKAETPHLNVDPIVAASFVILSLQQLISREDDPLHSQVLSVTYVKGGNTIDATPPVIEFG 274
Query: 288 GTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDFFVK 347
GT R+ E +L++R++EV+ QA+V RC VV D P +P N LH
Sbjct: 275 GTLRSLTTEGLYRLQKRVKEVVEGQAAVHRCKGVVQIKRDDYPMYPAVFNDEKLHHHVET 334
Query: 348 VASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETRGPQAPHHSPYFTINE 407
V ++GP V+ + +M EDFAFY +P + +G+ N G H+P F ++E
Sbjct: 335 VGRRLLGPDKVKPGEKIMAGEDFAFYQQLVPGV-MFGIGIRNGEVGSVHTVHNPKFFVDE 393
Query: 408 DALPYGAALQASLAARYLLE 427
D +P GAAL +LA YL E
Sbjct: 394 DVIPIGAALHTALAEMYLTE 413
>Os03g0836800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 276
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/268 (49%), Positives = 177/268 (66%), Gaps = 8/268 (2%)
Query: 164 LVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVI 223
LVFQPAEEG G ++++GAV++++ IFG+HV +P GVVASRPGP +AGS F A I
Sbjct: 2 LVFQPAEEGYAGGYYVLEEGAVDDVQGIFGMHVDAGLPAGVVASRPGPFLAGSARFTATI 61
Query: 224 SGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDS 283
+GKGGHAA PHH +DPI+A S+ ++SLQQ+V+RE DPL VV+V +GG AFNVIP+S
Sbjct: 62 NGKGGHAAAPHHAVDPIVAVSSAVLSLQQIVARETDPLQGAVVSVTTIKGGEAFNVIPES 121
Query: 284 VTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHD 343
VT+GGT R+ + + L +RI EVI QA+V RC A VDF++ P +P T+N ++
Sbjct: 122 VTLGGTLRSMTTDGMSYLMKRIREVIEGQAAVNRCTAAVDFMEDKLPPYPATVNDEEMYA 181
Query: 344 FFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYY------YFLGMYNETRGPQAP 397
VA M+G NV+ MGAEDF FYA IPA ++ GM T Q
Sbjct: 182 HAKAVAESMLGEANVKLSPQGMGAEDFGFYAQRIPAAFFGIGVGNDGGGMAETTTKNQL- 240
Query: 398 HHSPYFTINEDALPYGAALQASLAARYL 425
HSP+F ++E+ALP GAA A++A YL
Sbjct: 241 -HSPHFVVDEEALPVGAAFHAAVAIEYL 267
>Os07g0249800 Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-)
Length = 222
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 140/208 (67%), Gaps = 5/208 (2%)
Query: 225 GKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSV 284
GKGGHA +PH +DP++A S+ ++SLQQLVSRE DPL++ VV++ +GG A+NVIP+S
Sbjct: 13 GKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESA 72
Query: 285 TIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPTINSAGLHDF 344
++GGTFR+ E L +RI E+I +QA V RC A VDFL+++ +P T+N G++
Sbjct: 73 SLGGTFRSMTDEGLAYLMKRIREIIEAQAGVNRCAAAVDFLEEELRPYPATVNDDGMYGH 132
Query: 345 FVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYNETR-GPQA---PHHS 400
VA M+G NVR MG EDFAFYA P ++F+G+ NET GP A P HS
Sbjct: 133 AKAVAEAMLGEANVRVAARSMGGEDFAFYARRSPGA-FFFIGVGNETTMGPAAAVRPVHS 191
Query: 401 PYFTINEDALPYGAALQASLAARYLLEH 428
P+F ++E ALP GAAL A++A YL +H
Sbjct: 192 PHFVLDERALPVGAALHAAVAIEYLNKH 219
>Os07g0249900 Peptidase M20 family protein
Length = 159
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 93/156 (59%), Gaps = 4/156 (2%)
Query: 276 AFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVIVSQASVQRCNAVVDFLDKDRPFFPPT 335
A+NVIP SV GGT R+ E L +RI+E++ QA+V RC VDF+++ +P
Sbjct: 1 AYNVIPQSVEFGGTMRSMTDEGLAYLMKRIKEIVEGQAAVNRCGGGVDFMEESMRPYPAV 60
Query: 336 INSAGLHDFFVKVASEMVGPKNVRDKQPLMGAEDFAFYADAIPATYYYFLGMYN-ETRGP 394
+N G++ A ++G VR LMGAEDF FYA +P+ ++ +G+ N T
Sbjct: 61 VNDEGMYAHARASAERLLGAGGVRVAPQLMGAEDFGFYAARMPSAFFT-IGVGNATTSSA 119
Query: 395 QAPH--HSPYFTINEDALPYGAALQASLAARYLLEH 428
+A H HSP+F I+E ALP GAA+ A++A YL +H
Sbjct: 120 RAAHTTHSPHFVIDEAALPVGAAVHAAVAIDYLSKH 155
>Os07g0249700 Peptidase M20 family protein
Length = 60
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 117 QESVEWEHKSKVPGKMHGCGHDAHVAMLLGSARILQEHRDELK 159
+E V+WEHKS+ GKMH CGHDAH MLLG+A++LQ +D+LK
Sbjct: 12 KELVDWEHKSEESGKMHACGHDAHTTMLLGAAKLLQSQKDDLK 54
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,080,052
Number of extensions: 592309
Number of successful extensions: 1290
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1274
Number of HSP's successfully gapped: 9
Length of query: 442
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 338
Effective length of database: 11,605,545
Effective search space: 3922674210
Effective search space used: 3922674210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)