BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0532600 Os01g0532600|AJ491820
(509 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0532600 Similar to HKT1 (High-affinity potassium uptak... 1015 0.0
Os06g0701600 Cation transporter family protein 950 0.0
Os06g0701700 HKT-type transporter (Sodium ion transporter) 445 e-125
Os02g0175000 Cation transporter family protein 326 3e-89
Os04g0607500 Cation transporter family protein 274 1e-73
Os04g0607600 Cation transporter family protein 247 2e-65
Os01g0307500 Cation transporter family protein 234 1e-61
>Os01g0532600 Similar to HKT1 (High-affinity potassium uptake transporter)
Length = 509
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/509 (97%), Positives = 498/509 (97%)
Query: 1 MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHK 60
MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHK
Sbjct: 1 MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHK 60
Query: 61 YNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSK 120
YNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSK
Sbjct: 61 YNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSK 120
Query: 121 QNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTG 180
QNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTG
Sbjct: 121 QNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTG 180
Query: 181 SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNNXXXX 240
SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNN
Sbjct: 181 SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNNGLLL 240
Query: 241 XXXXXXXAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLA 300
AGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLA
Sbjct: 241 LLIGQILAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLA 300
Query: 301 VVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAA 360
VVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAA
Sbjct: 301 VVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAA 360
Query: 361 LVLFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVC 420
LVLFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVC
Sbjct: 361 LVLFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVC 420
Query: 421 ITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGW 480
ITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGW
Sbjct: 421 ITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGW 480
Query: 481 WSEPGKLILVLAMLCGRLNSKDSTSARTR 509
WSEPGKLILVLAMLCGRLNSKDSTSARTR
Sbjct: 481 WSEPGKLILVLAMLCGRLNSKDSTSARTR 509
>Os06g0701600 Cation transporter family protein
Length = 509
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/509 (90%), Positives = 479/509 (94%)
Query: 1 MPIRLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHK 60
MPIRLHIFV+SARHAINSSA ICRFIA+HLSPLLIHLSYFLIID+LGFV+LVVLRPSNHK
Sbjct: 1 MPIRLHIFVSSARHAINSSALICRFIAFHLSPLLIHLSYFLIIDVLGFVALVVLRPSNHK 60
Query: 61 YNPRYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSK 120
YNPRY+DMFFLSTSAVTV GLAT QMEDLSSSQIA+LTLLMFL S+MFLSFLGLVLESSK
Sbjct: 61 YNPRYIDMFFLSTSAVTVTGLATTQMEDLSSSQIAVLTLLMFLGSEMFLSFLGLVLESSK 120
Query: 121 QNKHDPENRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTG 180
QNKHDPENRRVSSVTVC+QS LEEA PQTPSMNS DIK+ C KYLVFVVLAYMIIILVTG
Sbjct: 121 QNKHDPENRRVSSVTVCEQSHLEEAIPQTPSMNSTDIKRSCHKYLVFVVLAYMIIILVTG 180
Query: 181 SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNNXXXX 240
SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESM VFSSNN
Sbjct: 181 SLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMAVFSSNNGLLL 240
Query: 241 XXXXXXXAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLA 300
AGSTL P+FLRLVIWALRGLRLAKAEEPDFMMNNSS+VGFSHLLPNLQTIFLA
Sbjct: 241 LLIGQILAGSTLLPMFLRLVIWALRGLRLAKAEEPDFMMNNSSSVGFSHLLPNLQTIFLA 300
Query: 301 VVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAA 360
VEVAFV MTVILFCCLNWDS VFAGL+SLQKITNALFMAV+ARQAGENSIDCSLVAPAA
Sbjct: 301 AVEVAFVGMTVILFCCLNWDSAVFAGLTSLQKITNALFMAVSARQAGENSIDCSLVAPAA 360
Query: 361 LVLFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVC 420
LVLFMVMMYTPSLTKLFSACQDHK+IGPESDDRTSKGKPFLK MAFSPL FNTTVIMLVC
Sbjct: 361 LVLFMVMMYTPSLTKLFSACQDHKQIGPESDDRTSKGKPFLKTMAFSPLAFNTTVIMLVC 420
Query: 421 ITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGW 480
ITERRS+STDPLN STFNIIFEVISAYGNIGLSTGYSCSRQLQHQ+GIACHEK Y+FSGW
Sbjct: 421 ITERRSISTDPLNFSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQDGIACHEKPYSFSGW 480
Query: 481 WSEPGKLILVLAMLCGRLNSKDSTSARTR 509
WSEPGKLILVLAML GRLNSKDSTSARTR
Sbjct: 481 WSEPGKLILVLAMLYGRLNSKDSTSARTR 509
>Os06g0701700 HKT-type transporter (Sodium ion transporter)
Length = 530
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/516 (48%), Positives = 327/516 (63%), Gaps = 28/516 (5%)
Query: 4 RLHIFVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNP 63
+L F R+ +N RFIA H+ P I LSYFL+I ILG V L+ L+PSN ++ P
Sbjct: 12 KLQSFGRIGRYFVNFVVLAHRFIALHIHPFWIQLSYFLLISILGSVLLMFLKPSNPEFRP 71
Query: 64 RYVDMFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSKQNK 123
Y+DM FLSTSA+T+ L TI+ME LSSSQI ++TLLM L ++F+SFLGL+L +K
Sbjct: 72 GYIDMLFLSTSALTLSSLITIEMEVLSSSQIVVITLLMLLGGEVFVSFLGLMLR--LNHK 129
Query: 124 HDPE--NRRVSSVTV-------------CKQSQLEEATPQTPSMNSIDIK--KRCLKYLV 166
H+PE +VSSV + C++ QLE A P+ PS D+K KR +L
Sbjct: 130 HNPEFSGDKVSSVPIELDTINSASTVISCEELQLEAAIPEVPSSTIKDLKRSKRLRWFLG 189
Query: 167 FVVLAYMIIILVTGSLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTN 226
FVV +Y ++I V G LLV YI+ VSSA+ L +K IN ALFS SVTVSSF N GL+PTN
Sbjct: 190 FVVFSYFVVIHVAGFLLVLWYISRVSSAKAPLKKKGINIALFSFSVTVSSFANVGLVPTN 249
Query: 227 ESMVVFSSNNXXXXXXXXXXXAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVG 286
E+M +FS N AG+TL+P+FLRL+IW L ++ K E M+ N +
Sbjct: 250 ENMAIFSKNPGLLLLFIGQILAGNTLYPLFLRLLIWFLG--KVTKLRELKLMIKNPEELQ 307
Query: 287 FSHLLPNLQTIFLAVVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQA 346
+ +LLP L T FLA + +A V LF ++W+S VF GLSS QKI NALFMAVNAR +
Sbjct: 308 YDYLLPKLPTAFLASTVIGLMASLVTLFGAVDWNSSVFDGLSSYQKIINALFMAVNARHS 367
Query: 347 GENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKRIGPESDDRTSKGKPFL--KMM 404
GENSIDCSL+APA LVLF+++MY P T + D K + ++ +K K L + +
Sbjct: 368 GENSIDCSLIAPAVLVLFIILMYLPPSTTFALSNGDEK-----TANKKAKRKLGLVVQNL 422
Query: 405 AFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQH 464
AFS L + +++ ITER L DPLN S N+IFE+ISAYGN+GLSTGYSCSR +
Sbjct: 423 AFSQLACISVFVIVAFITERSRLRNDPLNFSALNMIFEIISAYGNVGLSTGYSCSRLQKL 482
Query: 465 QEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLNS 500
G C +K Y+ SGWWS+ GKL+LV ML GRL +
Sbjct: 483 HPGSICQDKPYSLSGWWSDEGKLLLVFVMLYGRLKA 518
>Os02g0175000 Cation transporter family protein
Length = 531
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 294/515 (57%), Gaps = 29/515 (5%)
Query: 8 FVNSARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNPRYVD 67
F SA+ +I S +FI Y +PL +H++YF +I G+ SL VL+P + + +D
Sbjct: 26 FTKSAQKSIKYS---FQFI-YQNNPLFVHVAYFALISFAGYGSLKVLKPRDKSNTLKDLD 81
Query: 68 MFFLSTSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGL--------VLESS 119
+ F S SA TV +AT++MED SS+Q+ +LT+LM + ++F S LG+ ES
Sbjct: 82 VLFTSVSASTVSSMATVEMEDFSSAQLWVLTILMLIGGEVFTSMLGIHFMRAEFGTKESV 141
Query: 120 KQNKHDPENRRVSSVTVCKQSQLEEATPQTPSM------NSIDIKKRCLKYLVFVVLAYM 173
H P + S+T K + T T S N ++ + +K+L FVV+ Y+
Sbjct: 142 STRDHSP-CIDIESITSTKFGPSTQGTKVTVSFSELRMENGGHVEPKTIKFLGFVVMGYL 200
Query: 174 IIILVTGSLLVFMYIAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFS 233
+I + GSLL+++Y+ V SA +L RK I +FS+ +SS N G P NE+M++F
Sbjct: 201 LITNLGGSLLIYLYLNLVPSAHKILKRKGIGIIVFSVFTAISSVGNCGFTPVNENMIIFQ 260
Query: 234 SNNXXXXXXXXXXXAGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPN 293
N+ AG+TLF LRL++W+L ++ ++ +++ A+G+ HL+
Sbjct: 261 KNSILLLLILPQILAGNTLFAPCLRLMVWSLE--KITGKKDCRYILEYPKAIGYKHLMST 318
Query: 294 LQTIFLAVVEVAFVAMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDC 353
++++L + V+ + + +LF L W SV G+S+ QKI +ALF +VNAR AGE+ D
Sbjct: 319 RESVYLTLTVVSLIILQTVLFLSLEWSSVALDGMSNYQKIVSALFQSVNARHAGESVTDL 378
Query: 354 SLVAPAALVLFMVMMYTPSLTKLFSACQDHKRIGPESD-DRTSKGKPFLKMMAFSPLGFN 412
S ++ A LVL+ +MMY P T + G +S ++ +K K L+ FS + +
Sbjct: 379 SNLSSAILVLYTIMMYLPGYTSFLP-----RHDGEDSKTEKINKRKGLLENWIFSHMSYL 433
Query: 413 TTVIMLVCITERRSLSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHE 472
+ML+CITER S++TDPLN + F+I+FEV+SAYGN+G S GYSC R L H C +
Sbjct: 434 AIFVMLICITERDSMATDPLNFNVFSILFEVVSAYGNVGFSVGYSCKRLLNHDA--RCKD 491
Query: 473 KAYNFSGWWSEPGKLILVLAMLCGRLNSKDSTSAR 507
+Y F+G WS+ GK IL++ ML GRL + + R
Sbjct: 492 ASYGFAGKWSDNGKAILIIVMLFGRLKTFNMKGGR 526
>Os04g0607500 Cation transporter family protein
Length = 552
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 259/494 (52%), Gaps = 28/494 (5%)
Query: 25 FIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNPRYVDMFFLSTSAVTVIGLATI 84
F+ +PL++ L YF+II GF++L L+P K P+ +D+ F S S +TV +AT+
Sbjct: 65 FLVCKSNPLVVQLVYFVIISFAGFLALKNLKPQG-KPGPKDLDLLFTSVSTLTVSSMATV 123
Query: 85 QMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSKQNK-----------------HDPE 127
+MEDLS Q+ +L LLM + ++F S LGL ++ N+ + P
Sbjct: 124 EMEDLSDRQLWVLILLMLMGGEVFTSMLGLYFNNANANRNENSQRSLPSISLDIEFNSPA 183
Query: 128 NRRVSSVTVCKQSQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTGSLLVFMY 187
N +T C QS EE Q + I LV +V Y + +++ S+++ +Y
Sbjct: 184 NNGDHKITECGQS--EETMSQNQVQQNKSITYNPCAVLVRIVTGYFVATVISSSVIIIIY 241
Query: 188 IAHVSSARDVLTRKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNNXXXXXXXXXXX 247
S AR+VL K IN F I VSSF N G P N +M F N
Sbjct: 242 FWIDSDARNVLKSKEINMYTFCIFTAVSSFANCGFTPLNSNMQPFRKNWVLLLLVIPQIL 301
Query: 248 AGSTLFPVFLRLVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLAVVEVAFV 307
AG+TLF LRL +W L +++ E +++ + G+ HL ++++ + +
Sbjct: 302 AGNTLFSPLLRLCVWVLG--KVSGKAEYAYILQHPGETGYKHLHVRRNSVYIVLSVTGLI 359
Query: 308 AMTVILFCCLNWDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAALVLFMVM 367
+ V+ C W+S G++ LQK+ LF +VN RQAGE+ +D S ++P+ L+LF V+
Sbjct: 360 LLQVMFICSFEWNSESLEGMNWLQKLVGLLFQSVNTRQAGESILDISTLSPSTLLLFAVV 419
Query: 368 MYTPSLTKLFSACQDHKRIGPESDDRT-SKGKPFLKMMAFSPLGFNTTVIMLVCITERRS 426
MY PS +A D++ P +D +T S + + + L L CITER+S
Sbjct: 420 MYLPSDASFLTANADNQ---PLTDKKTNSISRALWRNFTVNKLSCLAMFTFLACITERKS 476
Query: 427 LSTDPLNLSTFNIIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGK 486
+S+DPLN + F+I+FE+ISA+GN+G S GYSC + L+ C + +Y F G W+E GK
Sbjct: 477 ISSDPLNFNIFSIVFEIISAFGNVGYSLGYSCQKLLKPDA--TCKDASYGFVGRWTEEGK 534
Query: 487 LILVLAMLCGRLNS 500
LI++L M GRL
Sbjct: 535 LIVILVMFLGRLKE 548
>Os04g0607600 Cation transporter family protein
Length = 500
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 266/481 (55%), Gaps = 20/481 (4%)
Query: 33 LLIHLSYFLIIDILGFVSLVVLRPSNHKYNPRYVDMFFLSTSAVTVIGLATIQMEDLSSS 92
L +H++YFL I LG+ L VL+ PR +D FF + SA TV ++T++ME S+
Sbjct: 13 LSMHVAYFLAISCLGYGLLGVLKVREPGAAPRRIDRFFTAVSAATVSSMSTVEMEVFSNG 72
Query: 93 QIAILTLLMFLDSKMFLSFLGLVLESSK-QNKHDPENRRVSS---VTVCK---------Q 139
Q+ +LT+LM L ++F+S +GL + SK ++ +RRV S V +
Sbjct: 73 QLVVLTVLMLLGGEVFVSLVGLASKWSKLRSDAMDRSRRVESHGDVALADIDGGDVENPT 132
Query: 140 SQLEEATPQTPSMNSIDIKKRCLKYLVFVVLAYMIIILVTGSLLVFMYIAHVSSARDVLT 199
S EEA + M++ ++ ++ L ++VLA ++ V G++ V Y+ AR L
Sbjct: 133 SSGEEAASRRRPMDADTLRHNAVRALFYIVLAIFAVVHVVGAVAVAAYVLASPGARRTLG 192
Query: 200 RKSINKALFSISVTVSSFTNGGLLPTNESMVVFSSNNXXXXXXXXXXXAGSTLF-PVFLR 258
KS+N F++ TVS+F+N G +PTNE+MVVF + AG+TLF P+
Sbjct: 193 DKSLNTWTFAVFTTVSTFSNCGFMPTNENMVVFKRDAPLQLLLVPQVLAGNTLFAPLLAA 252
Query: 259 LVIWALRGLRLAKAEEPDFMMNNSSAVGFSHLLPNLQTIFLAVVEVAFVAMTVILFCCLN 318
V A R + E ++A G++HL+P + LA AFVA+ + L C +
Sbjct: 253 CVWAAAAATRREELVEMAREGGRAAAAGYAHLMPARRCWMLAATVAAFVAVLMALVCGME 312
Query: 319 WDSVVFAGLSSLQKITNALFMAVNARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFS 378
W + G+S +K+ NALF+AVNAR GE+++D S++APA LVLF++MMY P T F
Sbjct: 313 WGGAL-QGMSPWEKVVNALFLAVNARHTGESTVDLSILAPAILVLFVLMMYLPPYTTWFP 371
Query: 379 ACQDHKRIGPESDDRTSKGKPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFN 438
++ + + ++G L+ S L + T ++ +CITERR L DPLN S +
Sbjct: 372 FEENST---TKDSNAENQGIRLLESTLLSQLSYLTIFVIAICITERRKLKEDPLNFSVLS 428
Query: 439 IIFEVISAYGNIGLSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRL 498
I+ EV+SAYGN+G S GYSCSRQ+ C +K F G WS+ GKLIL+ M GRL
Sbjct: 429 IVVEVVSAYGNVGFSMGYSCSRQINPDH--LCTDKWTGFVGRWSDSGKLILIFVMFFGRL 486
Query: 499 N 499
Sbjct: 487 K 487
>Os01g0307500 Cation transporter family protein
Length = 554
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 263/528 (49%), Gaps = 53/528 (10%)
Query: 22 ICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNPR--YVDMFFLSTSAVTVI 79
I +H P + L YFL I +LGF+ L L P PR +D+ F S SA TV
Sbjct: 17 IYHLFLFHAHPFWLQLLYFLFISLLGFLMLKAL-PMKTSMVPRPMDLDLIFTSVSATTVS 75
Query: 80 GLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSK-----------QNKHDPEN 128
+ ++ME S+SQ+ ++TLLM L ++F S LGL ++K + H
Sbjct: 76 SMVAVEMESFSNSQLLLITLLMLLGGEVFTSILGLYFTNAKYSSKMIATLPDDDDHGGSG 135
Query: 129 RRVSSVTVCKQS--QLEEATPQ----------TPSMNSIDI------KKRCL-------- 162
+ T + +LE A P + + +++ K+ C
Sbjct: 136 KPPPPTTSPSSTLVELELAPPMDVVVVNPTTTATTHDEVELGLGRRNKRGCTCTTTHTSS 195
Query: 163 ----------KYLVFVVLAYMIIILVTGSLLVFMYIAHVSSARDVLTRKSINKALFSISV 212
+ L+FVV+ Y ++ V G + +Y++ V A V+ K I+ F+I
Sbjct: 196 SSSASKTTTTRLLMFVVMGYHAVVHVAGYTAIVVYLSAVGGAGAVVAGKGISAHTFAIFT 255
Query: 213 TVSSFTNGGLLPTNESMVVFSSNNXXXXXXXXXXXAGSTLFPVFLRLVIWAL-RGLRLAK 271
VS+F N G +PTNE MV F S G+TLFPVFLRL I AL R +
Sbjct: 256 VVSTFANCGFVPTNEGMVSFRSFPGLLLLVMPHVLLGNTLFPVFLRLAIAALERVTGWPE 315
Query: 272 AEEPDFMMNNSSAVGFSHLLPNLQTIFLAVVEVAFVAMTVILFCCLNWDSVVFAGLSSLQ 331
E G+ HLLP+ +T FLA+ V + LFC + W S GL++ Q
Sbjct: 316 LGELLIRRRRGGGEGYHHLLPSSRTRFLALTVAVLVVAQLALFCAMEWGSDGLRGLTAGQ 375
Query: 332 KITNALFMAVNARQAGENSIDCSLVAPAALVLFMVMMYTPSLTKLFSACQDHKRIGPESD 391
K+ ALFMAVN+R +GE +D S V+ A +VL++VMMY P T H++ G +S
Sbjct: 376 KLVGALFMAVNSRHSGEMVLDLSTVSSAVVVLYVVMMYLPPYTTFVPVQDKHQQTGAQSG 435
Query: 392 DRTSKGKPFLKMMAFSPLGFNTTVIMLVCITERRSLSTDPLNLSTFNIIFEVISAYGNIG 451
S + + SPL I+++CITERR ++ DP+N S NI+ EVISAYGN+G
Sbjct: 436 QEGSSSSSIWQKLLMSPLSCLAIFIVVICITERRQIADDPINYSVLNIVVEVISAYGNVG 495
Query: 452 LSTGYSCSRQLQHQEGIACHEKAYNFSGWWSEPGKLILVLAMLCGRLN 499
STGYSC+RQ++ +G +C + FSG WS+ GKL L+ M GRL
Sbjct: 496 FSTGYSCARQVR-PDG-SCRDLWVGFSGKWSKQGKLTLMAVMFYGRLK 541
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,147,376
Number of extensions: 501552
Number of successful extensions: 1388
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1364
Number of HSP's successfully gapped: 8
Length of query: 509
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 404
Effective length of database: 11,553,331
Effective search space: 4667545724
Effective search space used: 4667545724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 158 (65.5 bits)