Os02g0175000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cation transporter family protein.
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Os02g0175000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cation transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 282.4 | 0.79 | 8.6 | -1.6 | 2.68 | -14.4 | -0.813 | -33.1 | 0.496 | 11 | 1.151 | 1094 | 8.83 | 7.05 |
| 383.46 | 0.919 | 8.97 | -0.311 | 2.78 | -1.86 | -1.16 | -- | 0.603 | 11 | 2.101 | 287 | 10.2 | 5.15 |
| 284.98 | 0.786 | 8.6 | -1.66 | 2.68 | -14.3 | -- | -32.6 | 0.492 | 11 | 1.085 | 1094 | 8.82 | 7.05 |
| 302.74 | 0.81 | 8.91 | -0.681 | 2.68 | -2.85 | -- | -- | 0.564 | 11 | 3.17 | 1090 | 10.6 | 4.55 |
| 708.96 | 1.24 | 8.71 | -1.9 | -- | -14.9 | -- | -31.1 | 0.364 | -- | 0.9156 | 1030 | 9.13 | 7.58 |
| 388.21 | 0.924 | 8.96 | -0.274 | 2.76 | -- | -1.08 | -- | 0.616 | 11 | -- | -- | -- | -- |
| 393.14 | 0.929 | 8.96 | -0.318 | 2.77 | -- | -- | -- | 0.612 | 11 | -- | -- | -- | -- |
| 382.98 | 0.911 | 9.19 | -0.811 | -- | -3.56 | -- | -- | 0.0754 | -- | 73.52 | 913 | 11.8 | 5.8 |
| 313.29 | 0.824 | 8.94 | -- | 2.64 | -2.65 | -- | -- | 0.567 | 11 | 3.406 | 1089 | 10.6 | 4.53 |
| 869.28 | 1.38 | 9.03 | -0.38 | -- | -- | -- | -- | 0.591 | -- | -- | -- | -- | -- |
| 395.81 | 0.931 | 8.96 | -- | 2.77 | -- | -- | -- | 0.648 | 11 | -- | -- | -- | -- |
| 362.09 | 0.886 | 9.04 | -- | -- | -3.21 | -- | -- | 0.488 | -- | 74.9 | 828 | 12.4 | 6.55 |
| 873.1 | 1.38 | 9.02 | -- | -- | -- | -- | -- | 0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 294.82 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 4 | 294.99 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 5 | 295.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 7 | 295.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 8 | 295.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 9 | 295.45 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 10 | 295.45 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 36 | 296.98 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 68 | 306.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 74 | 308.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 75 | 308.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 77 | 308.82 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 82 | 309.91 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 7 |
| 85 | 310.02 | temperature | 20.0 | 270 | < th | dose independent | sin | 11 | NA |
| 87 | 310.48 | temperature | 20.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 103 | 311.57 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 143 | 314.17 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 170 | 315.20 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 198 | 316.19 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 12 |
| 215 | 316.72 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 6 |
| 261 | 317.61 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 268 | 317.93 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 312 | 318.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 10 |
| 330 | 319.18 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 354 | 319.48 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 6 |
| 365 | 319.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 11 | 17 |
| 370 | 319.79 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 392 | 320.16 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 406 | 320.24 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 408 | 320.24 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 410 | 320.24 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 461 | 320.24 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 465 | 320.24 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 633 | 322.24 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 23 |
| 659 | 322.78 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 667 | 322.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 809 | 324.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 830 | 325.05 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 848 | 325.23 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 23 |
| 918 | 325.87 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 18 |
| 959 | 326.28 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 2 |