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Os06g0701600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cation transporter family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.13 (0.0393) R2 : 0.938
β1 : 2.14 (0.144) R2dD : 0.0316 R2D : 0.0174
β2 : 3.65 (0.119) R2dC : 0.168 R2C : 0.459
β3 : -6.25 (0.125) R2dE : 0.457 R2E : 0.731
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.48 (0.0839) R2dN8 : 0.00608 R2N8 : 6.34e-05
σ : 0.734
deviance : 248.65
__
_____
C
peak time of C : 5.65
E
wheather : temperature
threshold : 4.884
memory length : 252
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 15.1
open length of G : 9.03

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
244.96 0.735 9.09 2.31 3.69 -6.4 -0.0181 1.98 0.558 5.79 8.396 259 15.1 8.95
250.26 0.737 9.1 2.32 3.81 -6.2 -0.202 -- 0.545 5.77 6.968 257 15.2 8.96
244.22 0.728 9.09 2.31 3.71 -6.32 -- 2.17 0.571 5.77 7.66 256 15.1 8.97
248.65 0.734 9.13 2.14 3.65 -6.25 -- -- 0.48 5.65 4.884 252 15.1 9.03
396.13 0.927 9.18 2.32 -- -8.41 -- 2.28 0.533 -- -13.21 336 13.2 8.95
511.49 1.06 9 1.83 7.92 -- 0.262 -- 0.367 7.77 -- -- -- --
511.69 1.06 9 1.84 7.92 -- -- -- 0.367 7.77 -- -- -- --
388.63 0.918 9.1 2.26 -- -8.25 -- -- 0.757 -- -21.78 380 12.7 8.88
364.76 0.89 9.21 -- 3.44 -6.3 -- -- 0.193 5.11 -2.887 256 14.9 9.42
3905.28 2.92 9.19 1.93 -- -- -- -- 0.479 -- -- -- -- --
600.57 1.15 9.04 -- 7.94 -- -- -- 0.163 7.76 -- -- -- --
507.15 1.05 9.17 -- -- -8.12 -- -- 0.541 -- -25.39 380 12.7 8.95
4003.92 2.95 9.24 -- -- -- -- -- 0.265 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 249.25 temperature 10.0 270 > th dose dependent rect. 15 9
7 281.53 precipitation 0.1 270 < th dose independent rect. 15 19
8 281.53 precipitation 0.1 270 < th dose dependent rect. 15 19
10 282.46 radiation 1.0 270 > th dose independent rect. 16 18
14 288.09 precipitation 0.1 270 < th dose independent rect. 14 21
15 288.09 precipitation 0.1 270 < th dose dependent rect. 14 21
16 290.24 precipitation 0.1 270 < th dose independent rect. 16 17
17 290.24 precipitation 0.1 270 < th dose dependent rect. 16 17
26 295.57 precipitation 0.1 270 < th dose independent rect. 10 5
27 295.57 precipitation 0.1 270 < th dose dependent rect. 10 5
28 295.63 temperature 10.0 270 > th dose independent rect. 10 5
29 295.63 atmosphere 1015.0 270 < th dose independent rect. 10 5
30 295.63 temperature 10.0 270 > th dose independent rect. 15 19
31 295.73 atmosphere 995.0 270 > th dose independent rect. 10 5
32 295.87 wind 9.0 270 < th dose independent rect. 10 5
34 296.17 wind 9.0 270 < th dose independent rect. 15 19
36 298.14 temperature 10.0 270 > th dose dependent rect. 16 17
38 298.67 radiation 1.0 270 > th dose independent rect. 10 5
39 299.79 radiation 1.0 270 < th dose dependent sin 11 NA
45 302.50 radiation 1.0 270 < th dose independent sin 11 NA
46 302.52 precipitation 0.1 270 < th dose independent rect. 11 3
47 302.52 precipitation 0.1 270 < th dose dependent rect. 11 3
48 302.72 radiation 1.0 270 > th dose independent sin 11 NA
49 303.04 humidity 50.0 270 > th dose dependent rect. 19 10
50 303.26 temperature 10.0 270 > th dose independent rect. 11 3
51 303.26 atmosphere 995.0 270 > th dose independent rect. 11 3
52 303.26 atmosphere 1015.0 270 < th dose independent rect. 11 3
53 303.26 temperature 10.0 270 > th dose independent rect. 14 21
54 303.39 wind 9.0 270 < th dose independent rect. 11 3
55 303.63 radiation 1.0 270 > th dose independent rect. 11 3
56 304.44 wind 9.0 270 < th dose independent rect. 14 21
60 305.70 humidity 50.0 270 > th dose independent rect. 10 5
63 306.41 temperature 10.0 270 > th dose independent rect. 9 7
64 306.41 atmosphere 1015.0 270 < th dose independent rect. 9 7
65 306.41 temperature 10.0 270 > th dose independent rect. 16 17
66 306.58 wind 9.0 270 < th dose independent rect. 16 17
68 306.72 precipitation 0.1 270 < th dose independent rect. 9 7
69 306.72 precipitation 0.1 270 < th dose dependent rect. 9 7
70 307.36 wind 9.0 270 < th dose independent rect. 9 7
71 307.52 humidity 90.0 270 < th dose independent rect. 15 7
80 308.42 wind 1.0 270 > th dose independent rect. 10 5
86 309.29 wind 1.0 270 > th dose independent rect. 14 9
97 311.64 humidity 50.0 270 > th dose independent rect. 11 3
98 311.84 precipitation 0.1 270 < th dose independent rect. 15 8
99 311.84 precipitation 0.1 270 < th dose dependent rect. 15 8
100 311.89 temperature 10.0 270 > th dose dependent rect. 11 3
101 312.00 radiation 40.0 270 < th dose independent rect. 16 17
111 313.40 radiation 40.0 270 < th dose independent rect. 15 19
112 314.27 temperature 10.0 270 > th dose dependent rect. 10 5
113 314.32 humidity 90.0 90 < th dose independent rect. 16 19
116 314.86 humidity 90.0 270 < th dose independent rect. 11 3
117 314.95 wind 1.0 270 > th dose independent rect. 11 3
131 315.79 atmosphere 1015.0 270 < th dose independent rect. 15 19
144 317.88 atmosphere 995.0 270 > th dose independent rect. 15 19
158 320.26 humidity 90.0 270 < th dose independent rect. 10 5
159 320.51 atmosphere 995.0 90 > th dose independent rect. 17 18
161 320.77 precipitation 0.1 270 < th dose independent rect. 5 15
162 320.77 precipitation 0.1 270 < th dose dependent rect. 5 15
172 322.45 temperature 25.0 270 > th dose independent rect. 16 6
173 322.71 humidity 50.0 90 > th dose independent rect. 17 18
193 324.71 temperature 15.0 270 > th dose independent rect. 3 7
197 324.80 wind 9.0 270 < th dose independent rect. 3 7
199 324.88 atmosphere 995.0 270 > th dose independent rect. 3 7
200 324.88 atmosphere 1015.0 270 < th dose independent rect. 3 7
201 324.88 temperature 10.0 270 > th dose independent rect. 10 17
208 325.48 humidity 50.0 270 > th dose independent rect. 3 7
221 326.30 humidity 70.0 270 > th dose independent rect. 19 10
235 327.11 wind 9.0 270 < th dose independent rect. 10 17
240 327.40 precipitation 0.1 270 < th dose independent rect. 4 6
241 327.40 precipitation 0.1 270 < th dose dependent rect. 4 6
251 327.76 wind 1.0 270 > th dose independent rect. 15 19
262 328.94 wind 9.0 270 < th dose dependent rect. 11 3
270 329.43 radiation 40.0 270 < th dose independent rect. 14 9
273 329.57 precipitation 0.1 270 < th dose independent rect. 23 16
274 329.57 precipitation 0.1 270 < th dose dependent rect. 23 16
275 329.61 humidity 50.0 270 > th dose independent rect. 10 18
278 329.98 atmosphere 995.0 270 > th dose independent rect. 23 16
284 330.30 wind 9.0 270 < th dose dependent rect. 10 5
287 330.55 temperature 10.0 270 > th dose independent rect. 15 8
288 330.55 temperature 10.0 270 > th dose independent rect. 23 16
295 331.32 atmosphere 995.0 270 > th dose independent rect. 10 18
309 332.20 wind 9.0 270 < th dose independent rect. 23 16
322 333.34 temperature 30.0 270 < th dose independent rect. 4 6
326 333.46 wind 9.0 270 < th dose independent rect. 15 8
336 334.11 atmosphere 1015.0 270 < th dose independent rect. 15 8
369 335.82 atmosphere 1015.0 270 < th dose independent rect. 5 16
375 336.34 radiation 1.0 270 < th dose independent rect. 20 9
377 336.36 radiation 10.0 270 < th dose dependent rect. 20 9
379 336.47 wind 9.0 270 < th dose independent rect. 20 9
384 336.62 temperature 10.0 270 > th dose independent rect. 20 9
385 336.62 temperature 30.0 270 < th dose independent rect. 20 9
386 336.62 humidity 50.0 270 > th dose independent rect. 20 9
389 336.62 atmosphere 995.0 270 > th dose independent rect. 20 9
393 336.62 temperature 10.0 270 > th dose independent rect. 5 15
399 337.08 wind 1.0 90 > th dose independent rect. 17 18
413 338.10 humidity 50.0 270 > th dose independent rect. 11 16
425 339.43 wind 9.0 270 < th dose independent rect. 5 15
485 341.39 temperature 10.0 10 > th dose dependent rect. 17 19
499 341.97 radiation 40.0 270 < th dose independent rect. 4 6
517 342.78 temperature 15.0 10 > th dose dependent rect. 18 17
518 342.81 humidity 90.0 270 < th dose dependent rect. 16 17
531 343.59 atmosphere 1015.0 270 < th dose independent rect. 23 16
533 343.78 temperature 30.0 270 < th dose independent rect. 5 4
538 343.90 wind 9.0 270 < th dose independent rect. 5 4
539 343.90 temperature 10.0 270 > th dose independent rect. 5 4
541 343.90 humidity 50.0 270 > th dose independent rect. 5 4
542 343.90 atmosphere 995.0 270 > th dose independent rect. 5 4
543 343.90 atmosphere 1015.0 270 < th dose independent rect. 5 4
545 343.90 temperature 10.0 270 > th dose independent rect. 9 20
548 343.93 precipitation 0.1 270 < th dose independent rect. 5 4
549 343.93 precipitation 0.1 270 < th dose dependent rect. 5 4
550 343.94 wind 9.0 270 < th dose dependent rect. 10 18
554 344.06 precipitation 0.1 270 < th dose independent rect. 21 8
556 344.06 precipitation 0.1 270 < th dose dependent rect. 21 8
579 345.38 wind 9.0 270 < th dose independent rect. 9 20
583 345.47 precipitation 0.1 270 < th dose independent rect. 10 18
584 345.47 precipitation 0.1 270 < th dose dependent rect. 10 18
594 346.14 temperature 25.0 270 > th dose dependent rect. 17 15
604 346.69 humidity 50.0 270 > th dose independent rect. 23 16
619 347.55 radiation 40.0 270 < th dose independent rect. 5 4
627 348.06 wind 9.0 10 < th dose independent rect. 17 19
647 348.87 atmosphere 995.0 270 > th dose independent rect. 9 20
650 348.93 precipitation 0.1 10 < th dose independent rect. 17 19
651 348.93 precipitation 0.1 10 < th dose dependent rect. 17 19
661 349.62 temperature 25.0 90 > th dose independent rect. 17 18
680 350.13 wind 9.0 10 < th dose independent rect. 12 5
682 350.17 atmosphere 995.0 270 > th dose dependent rect. 11 3
683 350.18 temperature 10.0 10 > th dose independent rect. 12 5
685 350.18 atmosphere 1015.0 10 < th dose independent rect. 12 5
686 350.18 precipitation 0.1 10 < th dose independent rect. 12 5
687 350.18 temperature 10.0 10 > th dose independent rect. 17 19
688 350.18 precipitation 0.1 10 < th dose dependent rect. 12 5
717 351.41 radiation 20.0 90 < th dose independent rect. 16 9
728 352.20 humidity 90.0 270 < th dose dependent rect. 17 6
767 353.18 temperature 10.0 10 > th dose dependent rect. 12 5
770 353.24 wind 1.0 270 > th dose independent rect. 4 6
784 353.82 atmosphere 995.0 10 > th dose independent rect. 12 5
788 353.95 atmosphere 1015.0 10 < th dose independent rect. 17 19
797 354.36 humidity 50.0 270 > th dose dependent rect. 11 17
811 354.62 radiation 1.0 10 > th dose independent rect. 12 5
828 355.03 wind 9.0 270 < th dose dependent rect. 20 9
840 355.44 wind 1.0 10 > th dose independent rect. 12 5
843 355.50 humidity 50.0 10 > th dose independent rect. 17 19
859 355.99 precipitation 0.1 90 < th dose independent rect. 1 15
860 355.99 precipitation 0.1 90 < th dose dependent rect. 1 15
865 356.08 wind 9.0 270 < th dose dependent rect. 4 6
868 356.09 temperature 10.0 90 > th dose independent rect. 1 15
869 356.09 atmosphere 1015.0 90 < th dose independent rect. 1 15
885 356.49 atmosphere 995.0 10 > th dose independent rect. 17 19
890 356.64 wind 1.0 270 > th dose independent rect. 5 16
905 357.28 radiation 1.0 270 < th dose dependent rect. 20 22
910 357.34 wind 9.0 270 < th dose dependent rect. 5 4
928 357.63 radiation 1.0 270 < th dose dependent rect. 17 12
969 358.66 wind 9.0 90 < th dose independent rect. 1 15
992 359.30 radiation 10.0 10 < th dose dependent sin 17 NA