BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0356000 Os01g0356000|005-005-H02
(120 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0356000 Similar to Multidrug resistance-associated pro... 249 4e-67
Os04g0209200 Similar to Glutathione-conjugate transporter A... 142 4e-35
Os04g0209300 Similar to Glutathione-conjugate transporter A... 133 3e-32
Os01g0902100 ABC transporter, transmembrane region, type 1 ... 100 3e-22
Os01g0173900 Similar to MRP-like ABC transporter 93 5e-20
Os04g0588700 ABC transporter, transmembrane region domain c... 88 1e-18
Os04g0588600 ABC transporter, transmembrane region, type 1 ... 87 2e-18
Os02g0288400 Similar to Multidrug resistance associated pro... 87 2e-18
Os11g0155600 Similar to Multidrug-resistance associated pro... 86 4e-18
Os03g0142800 Similar to MRP-like ABC transporter 86 5e-18
Os02g0288733 ABC transporter, transmembrane region domain c... 85 1e-17
Os12g0562700 Similar to Multidrug-resistance associated pro... 80 2e-16
AK119821 70 3e-13
Os06g0561800 Similar to Multidrug resistance associated pro... 65 2e-11
>Os01g0356000 Similar to Multidrug resistance-associated protein MRP1 (Fragment)
Length = 120
Score = 249 bits (635), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 FDLQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASL 60
FDLQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASL
Sbjct: 1 FDLQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASL 60
Query: 61 KMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTAKWITVFFFILEFYGF 120
KMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTAKWITVFFFILEFYGF
Sbjct: 61 KMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTAKWITVFFFILEFYGF 120
>Os04g0209200 Similar to Glutathione-conjugate transporter AtMRP4
Length = 1207
Score = 142 bits (359), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 77/94 (81%)
Query: 7 YISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMDFHN 66
Y++TSRELTRLE +TKAPVI HFSETV G IRCF+K FF ENL R+N+SL+M FHN
Sbjct: 804 YLATSRELTRLEGVTKAPVIDHFSETVLGATTIRCFKKDKEFFQENLDRINSSLRMYFHN 863
Query: 67 NAANEWLGLRLELIGSLVLCVTALLMVTLPSNIV 100
AANEWLG RLELIG+LVL +TA LM++LPSN +
Sbjct: 864 YAANEWLGFRLELIGTLVLAITAFLMISLPSNFI 897
>Os04g0209300 Similar to Glutathione-conjugate transporter AtMRP4
Length = 1512
Score = 133 bits (334), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 75/94 (79%)
Query: 7 YISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMDFHN 66
YI+TSRELTRL+ +T+APVI HFSET G +RCF K+D F+ NL R+N++L+M FHN
Sbjct: 1105 YIATSRELTRLQGVTRAPVIDHFSETFLGAPTVRCFGKEDEFYQINLDRINSNLRMSFHN 1164
Query: 67 NAANEWLGLRLELIGSLVLCVTALLMVTLPSNIV 100
ANEWLG RLELIG+L+L +TA LM++LPSN +
Sbjct: 1165 YGANEWLGFRLELIGTLLLSITAFLMISLPSNFI 1198
>Os01g0902100 ABC transporter, transmembrane region, type 1 domain containing
protein
Length = 293
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 70/103 (67%)
Query: 3 LQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKM 62
+Q YYI ++REL R+ I KAPV+HHFSETV G IRCF + + FF ++L+ ++ ++
Sbjct: 16 MQSYYICSARELARMVGIRKAPVLHHFSETVSGAATIRCFNQGEKFFRKSLALIDDYSRI 75
Query: 63 DFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA 105
FHN+A EWL +R+ + +LV VT +++V++P N + P A
Sbjct: 76 TFHNSATIEWLCVRINFLFNLVFFVTLVILVSMPRNTIDPSLA 118
>Os01g0173900 Similar to MRP-like ABC transporter
Length = 1505
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 4 QKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMD 63
Q+YYI T+REL RL + KAP+I HF+E++ G IR F K++ F N ++A +
Sbjct: 1098 QRYYIDTARELQRLVGVCKAPIIQHFAESITGSTTIRSFGKENQFVSTNSHLMDAFSRPK 1157
Query: 64 FHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPG 103
F+N AA EWL RL+++ SL + + +V LP+ ++ PG
Sbjct: 1158 FYNAAAMEWLCFRLDMLSSLTFAFSLIFLVNLPTGLIDPG 1197
>Os04g0588700 ABC transporter, transmembrane region domain containing protein
Length = 1333
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%)
Query: 4 QKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMD 63
Q+YY T+ EL RL I KAP++HHF ET G +IR F+++D F+ NLS L+ +
Sbjct: 914 QRYYSLTATELARLSGIQKAPILHHFGETFYGAAIIRAFRQEDRFYRSNLSLLDNHSRPW 973
Query: 64 FHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTAKWITVF 111
FH AA EWL R+ L+ + V + +L+V LP V P + ++
Sbjct: 974 FHLMAAVEWLSFRMNLLCNFVFGFSLVLLVRLPQGFVNPSIGGLVVMY 1021
>Os04g0588600 ABC transporter, transmembrane region, type 1 domain containing
protein
Length = 1187
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%)
Query: 1 FDLQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASL 60
F Q+YYI T+REL RL I +AP++HHF+E++ G IR + ++D F NL ++
Sbjct: 777 FMCQRYYIPTARELARLSQIQRAPILHHFAESLTGASSIRAYGQKDRFRKSNLGLVDNHS 836
Query: 61 KMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA 105
+ FHN ++ EWL RL ++ + V + L+V+LP + P A
Sbjct: 837 RPWFHNISSMEWLSFRLNMLSNFVFAFSLTLLVSLPEGFINPSIA 881
>Os02g0288400 Similar to Multidrug resistance associated protein 2
Length = 1186
Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 12/108 (11%)
Query: 4 QKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNF------FHENLSRLN 57
Q+YYI +REL RL + +AP++ HF+E+V G +IRCF K+ F F +NLSR +
Sbjct: 780 QQYYIDGARELQRLTGVCRAPLMQHFAESVAGSNIIRCFGKERQFINYVSHFMDNLSRPS 839
Query: 58 ASLKMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA 105
+N+A+ EWL RL+++ S + +L+VTLP+ ++ P TA
Sbjct: 840 ------LYNSASMEWLCFRLDILSSFIFAFALVLLVTLPAALIDPKTA 881
>Os11g0155600 Similar to Multidrug-resistance associated protein 3
Length = 675
Score = 86.3 bits (212), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 64/101 (63%)
Query: 3 LQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKM 62
LQ+YY+++++EL R+ TK+ + +H E+V G + IR F+++D FF +NL ++ +
Sbjct: 265 LQRYYLASAKELMRINGTTKSALANHLGESVSGAITIRAFEEEDRFFAKNLELVDRNAGP 324
Query: 63 DFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPG 103
F+N AA EWL RLE++ + VL +A +M LP PG
Sbjct: 325 YFYNFAATEWLIQRLEMMSAAVLSFSAFVMAILPPGTFSPG 365
>Os03g0142800 Similar to MRP-like ABC transporter
Length = 1505
Score = 86.3 bits (212), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%)
Query: 3 LQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKM 62
+Q+YYI++SRELTR+ S+ K+PVIH FSE++ G IR F ++ F NL L+ +
Sbjct: 1097 MQRYYIASSRELTRILSVQKSPVIHLFSESIAGAATIRGFGQEKRFMKRNLYLLDCFARP 1156
Query: 63 DFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA 105
F + AA EWL LR+EL+ + V ++V+ P + P A
Sbjct: 1157 LFSSLAAIEWLCLRMELLSTFVFAFCMAILVSFPPGTIEPSMA 1199
>Os02g0288733 ABC transporter, transmembrane region domain containing protein
Length = 1095
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 12/107 (11%)
Query: 5 KYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNF------FHENLSRLNA 58
+YYI +REL RL + +APV+ HF+E+V G +IRCF K+ F F +NLSR +
Sbjct: 690 QYYIDGARELQRLTGVCRAPVMQHFAESVAGSNIIRCFGKEIQFINAVSHFMDNLSRPS- 748
Query: 59 SLKMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA 105
+N A+ EWL RL+++ S + +L+VTLP+ ++ P TA
Sbjct: 749 -----LYNAASMEWLCFRLDILSSFIFAFALILLVTLPAALIDPKTA 790
>Os12g0562700 Similar to Multidrug-resistance associated protein 3
Length = 1198
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 63/106 (59%)
Query: 3 LQKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKM 62
LQ+YY ++S+EL R+ TK+ V +H +E++ G + +R F+++ FF L ++ +
Sbjct: 814 LQRYYSASSKELMRINGTTKSLVANHLAESISGAVTVRAFKQEGRFFARFLELIDNNASP 873
Query: 63 DFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTAKWI 108
FH AA EWL RLE++ + +L +A ++ LP + PG A +
Sbjct: 874 SFHCFAATEWLTQRLEIMATTILSSSAFVITLLPQGTLSPGVAGMV 919
>AK119821
Length = 839
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 6 YYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMDFH 65
+Y+ SR+L RLESI ++P+ F ET+ GV IR + + F ENL+++N + +
Sbjct: 390 FYLRASRDLKRLESINRSPLFQQFGETLSGVTTIRAYGDERRFIRENLTKINTQARPFIY 449
Query: 66 NNAANEWLGLRLELIGSLV 84
AAN WL R + +G LV
Sbjct: 450 LWAANRWLAFRTDCLGDLV 468
>Os06g0561800 Similar to Multidrug resistance associated protein 1
Length = 1214
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 8 ISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMDFHNN 67
+ +R+L R+ TKAPV+++ +E++ V+ IR F + D F NL ++ + FH
Sbjct: 809 VGATRDLARINGTTKAPVMNYAAESILAVVTIRSFGETDRFIRNNLLLIDTDATLFFHTV 868
Query: 68 AANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPGTA--------KWITVFFFILEFYG 119
AA EW+ +R+E + SL L ALL+V P V PG A V F+ +FY
Sbjct: 869 AAQEWVLIRVEALQSLTLLTAALLLVLAPPGAVSPGFAGLSLSFALSLTAVQVFLTKFYS 928
Query: 120 F 120
+
Sbjct: 929 Y 929
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.140 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,463,017
Number of extensions: 106907
Number of successful extensions: 293
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 294
Number of HSP's successfully gapped: 14
Length of query: 120
Length of database: 17,035,801
Length adjustment: 86
Effective length of query: 34
Effective length of database: 12,545,397
Effective search space: 426543498
Effective search space used: 426543498
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 149 (62.0 bits)