BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0617400 Os12g0617400|AY838901
(613 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0617400 Similar to Neoxanthin cleavage enzyme 1111 0.0
Os03g0645900 Carotenoid oxygenase family protein 937 0.0
Os07g0154100 Similar to Viviparous-14 729 0.0
Os02g0704000 Carotenoid oxygenase family protein 350 2e-96
Os12g0640600 Similar to Crocetin dialdehyde 334 1e-91
Os12g0435200 Similar to Zeaxanthin cleavage oxygenase 322 5e-88
Os04g0131800 180 2e-45
Os09g0321200 Carotenoid oxygenase family protein 160 3e-39
Os10g0170700 105 1e-22
Os01g0566500 Similar to Dioxygenase RAMOSUS1 91 2e-18
Os08g0371564 Carotenoid oxygenase family protein 84 4e-16
>Os12g0617400 Similar to Neoxanthin cleavage enzyme
Length = 613
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/613 (89%), Positives = 550/613 (89%)
Query: 1 MPTTFTPNSPASSCSIHHRASPSRGARNSVRFTRPRXXXXXTNSVLXXXXXXXXXXXXXX 60
MPTTFTPNSPASSCSIHHRASPSRGARNSVRFTRPR TNSVL
Sbjct: 1 MPTTFTPNSPASSCSIHHRASPSRGARNSVRFTRPRAAAAATNSVLSAPSSVPPAYVPPP 60
Query: 61 XXXXTKMFPEXXXXXXXXXXXXXXXXXXXXLNFFQRAAAVALDAFEEGFITNVLERPHAL 120
TKMFPE LNFFQRAAAVALDAFEEGFITNVLERPHAL
Sbjct: 61 PPPPTKMFPEAGDAAAAKAAARRCGKKKDGLNFFQRAAAVALDAFEEGFITNVLERPHAL 120
Query: 121 PRTADPAVQIAGNFAPVGEQPPVRSLPVSGRIPPFINGVYARNGANPHFEPTAGHHLFDG 180
PRTADPAVQIAGNFAPVGEQPPVRSLPVSGRIPPFINGVYARNGANPHFEPTAGHHLFDG
Sbjct: 121 PRTADPAVQIAGNFAPVGEQPPVRSLPVSGRIPPFINGVYARNGANPHFEPTAGHHLFDG 180
Query: 181 DGMVHAVRIRNGAAESYACRFTETARLGQERALGRAVFPKAIGELHGHSGIARLALFYAR 240
DGMVHAVRIRNGAAESYACRFTETARLGQERALGRAVFPKAIGELHGHSGIARLALFYAR
Sbjct: 181 DGMVHAVRIRNGAAESYACRFTETARLGQERALGRAVFPKAIGELHGHSGIARLALFYAR 240
Query: 241 GLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGRYDFDGQLGC 300
GLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGRYDFDGQLGC
Sbjct: 241 GLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGRYDFDGQLGC 300
Query: 301 AMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTKSPDVEIELEQPTMIHDFAITE 360
AMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTKSPDVEIELEQPTMIHDFAITE
Sbjct: 301 AMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTKSPDVEIELEQPTMIHDFAITE 360
Query: 361 NFVVVPDHQVVFKLGEMFRGGSPVVLDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHL 420
NFVVVPDHQVVFKLGEMFRGGSPVVLDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHL
Sbjct: 361 NFVVVPDHQVVFKLGEMFRGGSPVVLDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHL 420
Query: 421 WNAWXXXXXXXXXXXXXCMTPADSIFNESDEHLESVLTEIRLNTRTGESTRRAVLPPAAQ 480
WNAW CMTPADSIFNESDEHLESVLTEIRLNTRTGESTRRAVLPPAAQ
Sbjct: 421 WNAWEEAESGEVVVVGSCMTPADSIFNESDEHLESVLTEIRLNTRTGESTRRAVLPPAAQ 480
Query: 481 VNLEVGMVNRAMLGRKTRYAYLAVAEPWPKVSGFAKVDLATGELTKFEYGEGRFGGEPCF 540
VNLEVGMVNRAMLGRKTRYAYLAVAEPWPKVSGFAKVDLATGELTKFEYGEGRFGGEPCF
Sbjct: 481 VNLEVGMVNRAMLGRKTRYAYLAVAEPWPKVSGFAKVDLATGELTKFEYGEGRFGGEPCF 540
Query: 541 VPMXXXXXXXSPARGEDDGYILSFVRDEAAGTSELLVVNAADMRLEATVQLPSRVPYGFH 600
VPM SPARGEDDGYILSFVRDEAAGTSELLVVNAADMRLEATVQLPSRVPYGFH
Sbjct: 541 VPMGGAGAAASPARGEDDGYILSFVRDEAAGTSELLVVNAADMRLEATVQLPSRVPYGFH 600
Query: 601 GTFINAGELATQA 613
GTFINAGELATQA
Sbjct: 601 GTFINAGELATQA 613
>Os03g0645900 Carotenoid oxygenase family protein
Length = 608
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/523 (86%), Positives = 472/523 (90%), Gaps = 3/523 (0%)
Query: 91 LNFFQRAAAVALDAFEEGFITNVLERPHALPRTADPAVQIAGNFAPVGEQPPVRSLPVSG 150
LNFFQRAAA+ALDAFEEGF+ NVLERPH LP TADPAVQIAGNFAPVGE PP R+LPVSG
Sbjct: 89 LNFFQRAAAMALDAFEEGFVANVLERPHGLPSTADPAVQIAGNFAPVGETPPARALPVSG 148
Query: 151 RIPPFINGVYARNGANPHFEPTAGHHLFDGDGMVHAVRIRNGAAESYACRFTETARLGQE 210
RIPPFINGVYARNGANPHF+P AGHHLFDGDGMVHAVRIRNGAAESYACRFTETARL QE
Sbjct: 149 RIPPFINGVYARNGANPHFDPVAGHHLFDGDGMVHAVRIRNGAAESYACRFTETARLRQE 208
Query: 211 RALGRAVFPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMS 270
RA+GR +FPKAIGELHGHSGIARLALFYAR CGL+DPSHGTGVANAGL+YFNGRLLAMS
Sbjct: 209 RAMGRPMFPKAIGELHGHSGIARLALFYARAACGLLDPSHGTGVANAGLIYFNGRLLAMS 268
Query: 271 EDDLPYQVRVTADGDLETVGRYDFDGQLGCAMIAHPKLDPVSGELFALSYDVIKKPYLKY 330
EDDLPYQVRVTADGDLETVGRYDFDGQLGCAMIAHPKLDP +GEL ALSYDVIKKPYLKY
Sbjct: 269 EDDLPYQVRVTADGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKKPYLKY 328
Query: 331 FYFDADGTKSPDVEIELEQPTMIHDFAITENFVVVPDHQVVFKLGEMFRGGSPVVLDREK 390
FYF DGTKS DVEI L+QPTMIHDFAITEN+VVVPDHQVVFKL EM RGGSPVVLD+EK
Sbjct: 329 FYFAPDGTKSADVEIPLDQPTMIHDFAITENYVVVPDHQVVFKLQEMLRGGSPVVLDKEK 388
Query: 391 TSRFGVLPKHATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXXXXXXXCMTPADSIFNESD 450
TSRFGVLPKHA + EMVWVDVPDCFCFHLWNAW CMTPADSIFNESD
Sbjct: 389 TSRFGVLPKHAADASEMVWVDVPDCFCFHLWNAWEEADTDEVVVIGSCMTPADSIFNESD 448
Query: 451 EHLESVLTEIRLNTRTGESTRRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWPK 510
+ LESVLTEIRLNTRTGESTRRA+LPP++QVNLEVGMVNR +LGRKTRYAYLAVAEPWPK
Sbjct: 449 DRLESVLTEIRLNTRTGESTRRAILPPSSQVNLEVGMVNRNLLGRKTRYAYLAVAEPWPK 508
Query: 511 VSGFAKVDLATGELTKFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVRDEAA 570
VSGFAKVDLATGELTKFEYGEGRFGGEPCFVPM + RGEDDGYILSFV DE A
Sbjct: 509 VSGFAKVDLATGELTKFEYGEGRFGGEPCFVPM---DAAAATPRGEDDGYILSFVHDERA 565
Query: 571 GTSELLVVNAADMRLEATVQLPSRVPYGFHGTFINAGELATQA 613
GTSELLVVNAADMRLEATVQLPSRVPYGFHGTFI EL TQA
Sbjct: 566 GTSELLVVNAADMRLEATVQLPSRVPYGFHGTFITGDELTTQA 608
>Os07g0154100 Similar to Viviparous-14
Length = 582
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/533 (68%), Positives = 411/533 (77%), Gaps = 17/533 (3%)
Query: 91 LNFFQRAAAVALDAFEEGFITNVLERPHALPRTADPAVQIAGNFAPVGEQPPVRSLPVSG 150
+N QR AA A+DA EEG + +LER HALPRTADPAVQIAGN+APVGE+PPVR LPVSG
Sbjct: 57 MNPLQRLAAAAIDAVEEGLVAGLLERGHALPRTADPAVQIAGNYAPVGERPPVRGLPVSG 116
Query: 151 RIPPFINGVYARNGANPHFEPTAGHHLFDGDGMVHAVRIRNGAAESYACRFTETARLGQE 210
R+P ++GVY RNGANP P AGHHLFDGDGM+HAVR+ G AESYACRFTETARL QE
Sbjct: 117 RLPACLDGVYVRNGANPLHAPRAGHHLFDGDGMLHAVRLAGGRAESYACRFTETARLRQE 176
Query: 211 RALGRAVFPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMS 270
R +GR VFPKAIGELHGHSG+ARL LF +R LCG++D S G GVANAGLVY +GRLLAMS
Sbjct: 177 REMGRPVFPKAIGELHGHSGVARLLLFGSRALCGVLDASRGIGVANAGLVYHDGRLLAMS 236
Query: 271 EDDLPYQVRVTADGDLETVGRYDFDGQLGC--AMIAHPKLDPVSGELFALSYDVIKKPYL 328
EDDLPY VRVT DGDLETVGRYDF GQL MIAHPKLDPV+GELFALSY+V+ KPYL
Sbjct: 237 EDDLPYHVRVTHDGDLETVGRYDFHGQLDADGTMIAHPKLDPVTGELFALSYNVVSKPYL 296
Query: 329 KYFYFDADGTKSPDVEIELEQPTMIHDFAITENFVVVPDHQVVFKLGEMFRGGSPVVLDR 388
KYFYF ADG KS DV+I + PTMIHDFA+TEN+ VVPD Q+VFKL EM RGGSPVV DR
Sbjct: 297 KYFYFTADGRKSRDVDIPVGAPTMIHDFAVTENYAVVPDQQIVFKLQEMVRGGSPVVYDR 356
Query: 389 EKTSRFGVLPKHATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXXXXXXXCMTPADSIFNE 448
EK SRFGVLPK A + E+ WV+VP CFCFHLWNAW CMTP D++FNE
Sbjct: 357 EKASRFGVLPKRAADASELRWVEVPGCFCFHLWNAWEDDATGEIVVIGSCMTPPDAVFNE 416
Query: 449 -----SDEHLESVLTEIRLNTRTGESTRRAVLPPAA-QVNLEVGMVNRAMLGRKTRYAYL 502
+E SVL+EIRL+ RTG S RR VL AA QVNLE GMVNR +LGRKTRYAYL
Sbjct: 417 PSQSPEEESFRSVLSEIRLDPRTGVSRRRDVLRDAAEQVNLEAGMVNRQLLGRKTRYAYL 476
Query: 503 AVAEPWPKVSGFAKVDLATGELTKFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYIL 562
A+AEPWP+VSGFAKVDL +G KF YGEGR+GGEPCFVP + A EDDG++L
Sbjct: 477 AIAEPWPRVSGFAKVDLESGTAEKFIYGEGRYGGEPCFVP-------RAGAAAEDDGHVL 529
Query: 563 SFVRDEAAGTSELLVVNAADMRLE--ATVQLPSRVPYGFHGTFINAGELATQA 613
FV DE GTSEL+VV+A +E A V+LP RVPYG HGTFI A EL QA
Sbjct: 530 CFVHDEERGTSELVVVDAGSEAMEEVAAVKLPGRVPYGLHGTFIGANELQRQA 582
>Os02g0704000 Carotenoid oxygenase family protein
Length = 638
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 216/528 (40%), Positives = 285/528 (53%), Gaps = 34/528 (6%)
Query: 103 DAFEEGFITNVLERPHALPRTADPAVQIAGNFAPVGEQPPVRSLPVSGRIPPFI-NGVYA 161
+A EE + N P AL DP + NF PV E PP V G IP + G Y
Sbjct: 125 NALEE--VINTFIDPPALRPAVDPRNVLTSNFVPVDELPPTPCPVVRGAIPRCLAGGAYI 182
Query: 162 RNGANPHFEPTAGHHLFDGDGMVHAVRIRNGAAES----YACRFTETARLGQERALGRAV 217
RNG NP P HHLFDGDGM+H++ + + A+ R+ +T + ER G V
Sbjct: 183 RNGPNPQHLPRGPHHLFDGDGMLHSLLLPSPASSGDDPVLCSRYVQTYKYLVERDAGAPV 242
Query: 218 FPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQ 277
P HG +G+AR A+ AR L G ++P G G+AN L YF GRL A+ E DLPY
Sbjct: 243 LPNVFSGFHGVAGMARGAVVAARVLTGQMNPLEGVGLANTSLAYFAGRLYALGESDLPYA 302
Query: 278 VRVTAD-GDLETVGRYDFDGQLGCAMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDAD 336
VRV D G++ T GR DF G+L M AHPK DPV+GELFA Y + P++ YF FD
Sbjct: 303 VRVHPDTGEVTTHGRCDFGGRLVMGMTAHPKKDPVTGELFAFRYGPV-PPFVTYFRFDPA 361
Query: 337 GTKSPDVEI-ELEQPTMIHDFAITENFVVVPDHQVVFKLGEM-FRGGSPVVLDREKTSRF 394
G K DV I ++QP+ +HDFAITE + + P+ Q+V K +M GGSPV D K R
Sbjct: 362 GNKGADVPIFSVQQPSFLHDFAITERYAIFPEIQIVMKPMDMVVGGGSPVGSDPGKVPRL 421
Query: 395 GVLPKHATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXXXXXXXCMTPADSIFNESDEHLE 454
GV+P++AT EM W +VP H NAW + P + EH+E
Sbjct: 422 GVIPRYATDESEMRWFEVPGFNIMHSVNAW----EEAGGEELVLVAPNVLSIEHALEHME 477
Query: 455 ---SVLTEIRLNTRTGESTRRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWPKV 511
S + ++R+N RTG TR P A N + ++N A LGR+ RY Y V +P PK+
Sbjct: 478 LVHSCVEKVRINLRTGVVTRT----PLAAGNFDFPVINPAFLGRRNRYGYFGVGDPAPKI 533
Query: 512 SGFAKVDL---ATGELT--KFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVR 566
G AK+D G+ T + ++G G F GEP FV EDDGY++ +V
Sbjct: 534 GGVAKLDFDRAGEGDCTVAQRDFGPGCFAGEPFFV-----ADDVEGNGNEDDGYLVCYVH 588
Query: 567 DEAAGTSELLVVNA--ADMRLEATVQLPSRVPYGFHGTFINAGELATQ 612
DEA G + +V++A D+ + A VQLP RVPYGFHG F+ EL +Q
Sbjct: 589 DEATGENRFVVMDARSPDLEIVAEVQLPGRVPYGFHGLFVTQAELQSQ 636
>Os12g0640600 Similar to Crocetin dialdehyde
Length = 540
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 281/511 (54%), Gaps = 33/511 (6%)
Query: 124 ADPAVQIAGNFAPVG-EQPPVRSLPVSGRIPPFINGVYARNGANPHFEPTAGHHLFDGDG 182
+ P ++GNFAPV E PP +LPV G +P +NG + R G NP F P AG+H FDGDG
Sbjct: 41 SKPLYWLSGNFAPVHHETPPAPALPVRGHLPECLNGEFVRVGPNPKFVPVAGYHWFDGDG 100
Query: 183 MVHAVRIRNGAAESYACRFTETARLGQERALGRAVFPKAIGELHGHSGIARLALFYARGL 242
M+HA+RI++G A +Y R+ +T+RL QE G A F K IG+L G G+ + + R
Sbjct: 101 MIHAMRIKDGKA-TYVSRYVKTSRLKQEEYFGGAKFMK-IGDLKGFYGLFMVQMQQLRKK 158
Query: 243 CGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGRYDFDGQLGCAM 302
++D ++G G AN L+Y +G+L+A+SE D PY V+V DGDL+T+G D+D +L +
Sbjct: 159 LKVLDFTYGHGTANTALIYHHGKLMALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSF 218
Query: 303 IAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTKSPDVEIELEQPTMIHDFAITENF 362
AHPK+DP + E+FA Y + PY Y DG V I + + M+HDFAITEN+
Sbjct: 219 TAHPKVDPFTDEMFAFGYSH-EPPYCTYRVITKDGAMLDPVPITIPESVMMHDFAITENY 277
Query: 363 VVVPDHQVVFKLGEMFRGGSPVV-LDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHLW 421
+ D ++F+ EM + G + D K +RFG+L ++ + W ++P+CF FH
Sbjct: 278 SIFMDLPLLFRPKEMVKNGEFIYKFDPTKKARFGILQRYEKDDTNIRWFELPNCFIFHNA 337
Query: 422 NAWXXXXXXXXXXXXXCMTPADSIFNESDEHLESV---LTEIRLNTRTGESTRRAVLPPA 478
NAW D + ++LE+ L E+R N +TG ++++ + A
Sbjct: 338 NAWEEGDEVILITCRLENPDLDKVNGYQSDNLENFGNELYEMRFNMKTGAASQKQLSVSA 397
Query: 479 AQVNLEVGMVNRAMLGRKTRYAYLAVAEPW--------------PKVSGFAKVDLATGEL 524
++ +N + GRK RY Y A+ P++SGF ++++
Sbjct: 398 ----VDFPRINESYTGRKQRYVYCAILNSIAKVAXIIKFDLHAEPEISGFKQLEVGGNVR 453
Query: 525 TKFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVRDEAAGTSELLVVNAADMR 584
F+ G GRFG E FVP EDDGY++ FV DE G SE+ V++A M
Sbjct: 454 GIFDLGPGRFGSEAIFVPREPGVSGE-----EDDGYLIFFVHDENTGKSEVNVIDAKTMS 508
Query: 585 LE--ATVQLPSRVPYGFHGTFINAGELATQA 613
+ A V+LPSRVPYGFH FIN +LA Q+
Sbjct: 509 ADPVAVVELPSRVPYGFHAFFINEEQLAKQS 539
>Os12g0435200 Similar to Zeaxanthin cleavage oxygenase
Length = 576
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/520 (37%), Positives = 282/520 (54%), Gaps = 29/520 (5%)
Query: 110 ITNVLERPHALPRTADPAVQIAGNFAPVGEQPPVRSLPVSGRIPPFI-NGVYARNGANP- 167
I ++ P P T DP ++GNFAPV E PP + G IP + GVY RNG NP
Sbjct: 68 INRFIDLPEQRP-TVDPRRVLSGNFAPVDELPPTSCHVIRGSIPSCLAGGVYIRNGPNPQ 126
Query: 168 HFEPTAGHHLFDGDGMVHAVRIRNGAA----ESYAC-RFTETARLGQERALGRAVFPKAI 222
H P HHLFDGDGM+H++ I + ++ E C R+ T + ER G V P
Sbjct: 127 HRLPQRTHHLFDGDGMLHSLLIPSASSTLLSEPVLCSRYVHTYKYLLERETGGPVLPNFF 186
Query: 223 GELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVT- 281
HG +G+AR + AR L G ++ + G G+AN + F L A+ E DLPY + +
Sbjct: 187 AGFHGVAGLARAVVMIARVLAGQINLNKGFGLANTSITLFADCLYALCESDLPYSMHINP 246
Query: 282 ADGDLETVGRYDFDGQLGCAMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTKSP 341
A+G++ T+GR DF G L M AHPK DPV+ ELFA Y+V + P++ YF+FD G+K
Sbjct: 247 ANGEVTTLGRCDFGGDLSFRMTAHPKKDPVTMELFAFRYNVFQ-PFITYFWFDRAGSKVA 305
Query: 342 DVEI-ELEQPTMIHDFAITENFVVVPDHQVVFKLGEM-FRGGSPVVLDREKTSRFGVLPK 399
DV I L++P+++HDFAITE + + P+ Q++ +M RG S V LDR R GVLP+
Sbjct: 306 DVPILSLQKPSVMHDFAITERYAIFPESQLIVNPMDMVMRGSSLVGLDRTMVPRIGVLPR 365
Query: 400 HATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXXXXXXXCMTPADSIFNESDEHLESVLTE 459
+A +M W +VP H N W + + + E + + +
Sbjct: 366 YAKDESDMRWFEVPRFNMLHTTNGWEEADGEEIVLVAPNILSIEHMLGNM-ELMRARVDM 424
Query: 460 IRLNTRTGESTRRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWPKVSGFAKVD- 518
+R+N TG+ + A+ P + LE G++++ +GRK RY Y V+ P PK+ G K+D
Sbjct: 425 VRINLCTGDVSCTALSPES----LEFGVIHQGYVGRKNRYGYFGVSGPLPKIKGIRKLDF 480
Query: 519 --LATGELT--KFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVRDEAAGTSE 574
+ +G+ T + ++G G F GEP FVP ED GY++ + +E G S
Sbjct: 481 DLVGSGDCTVGRRDFGLGCFAGEPFFVP-----DNIDGYGNEDSGYVVCYTHEEDTGESW 535
Query: 575 LLVVNAADMRLE--ATVQLPSRVPYGFHGTFINAGELATQ 612
+V++A L+ A VQLPSR+PYGFHG F+ EL Q
Sbjct: 536 FVVMDAKSPELDIVAEVQLPSRIPYGFHGIFVKQAELLAQ 575
>Os04g0131800
Length = 173
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 118/183 (64%), Gaps = 11/183 (6%)
Query: 407 MVWVDVPDCFCFHLWNAWXXXXXXXXXXXXXCMTPADSIFNESDEHLESVLTEIRLNTRT 466
M W DVP CFCFH+WNAW C+TP D++ + + +VL+E+RL+ RT
Sbjct: 1 MRWFDVPGCFCFHIWNAWDEPAVVIVCS---CITPPDALLSS----VRAVLSEVRLDLRT 53
Query: 467 GESTRRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWPKVSGFAKVDLATGELTK 526
G +RR ++P +NLE G VNR++LGR+TR+ YLAVAEPWP+ G AKVDL TGEL
Sbjct: 54 GRYSRRELVP---GLNLEAGTVNRSLLGRRTRFTYLAVAEPWPRCRGVAKVDLGTGELAA 110
Query: 527 F-EYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVRDEAAGTSELLVVNAADMRL 585
EYGEGRF GEP FVP EDDG+++ V DEAAGT+EL+V++A M +
Sbjct: 111 VHEYGEGRFSGEPTFVPATSATSGTGTGGREDDGHVVVMVHDEAAGTAELVVLDAGKMEV 170
Query: 586 EAT 588
AT
Sbjct: 171 AAT 173
>Os09g0321200 Carotenoid oxygenase family protein
Length = 595
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 156/576 (27%), Positives = 250/576 (43%), Gaps = 100/576 (17%)
Query: 91 LNFFQRAAAVALDAFEEGFITNVLERPHALPRTADPAVQIAGNFAPVGE-QPPVRSLPVS 149
L+F A+ AL+ ++G + +++ + P + NFAPV E + L +
Sbjct: 48 LSFRIDEASKALETAKQGLLDALVDSTFKF--SDQPMLPSENNFAPVNEISEAIEILQIE 105
Query: 150 GRIPP-FINGVYARNGANPHFEP---------TAGHHLFDGDGMVHAVRIRNGAAE---- 195
G IP F GVY RNG+NP F + +G+GM+HA+ +++
Sbjct: 106 GEIPEDFPEGVYIRNGSNPLFGALHSTVSIFGKSSEIWVEGEGMLHAIYFTKNSSDTWSV 165
Query: 196 SYACRFTETARLGQERALGRAVFPKAIGELHGHSG--IARLALFYARGLCGLVDPSHGTG 253
SYA R+ ++ L E+ + F AI G S +A L Y R G V+ +
Sbjct: 166 SYANRYVQSETLKIEKTRQKPCFLPAI---MGDSAAIVAAYILNYMR--FGKVNKN---- 216
Query: 254 VANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGRYDFDGQLGCAMIAHPKLDPVSG 313
++N + G++ A+SE+ LP ++ + +L+T +D +G+ AHPK+ P SG
Sbjct: 217 ISNTNVFEHAGKVYAVSENHLPQEISIQ---NLDTGDSWDINGEWKRPFTAHPKVAPGSG 273
Query: 314 ELFALSYDVIKKPYLKYFYFDADGTK-SPDVEIELEQPTMIHDFAITENFVVVPDHQVVF 372
EL D K+P+L ADGT+ V+++L++ + HD +T + ++ D +
Sbjct: 274 ELVIFGSDA-KRPFLMVGVVSADGTQLKHKVDLKLDRCILCHDIGVTVKYNIIMDIPLTI 332
Query: 373 KLGEMFRGGSPVVLDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXX 432
+ + RG + +++ +R GV+P++ + ++W DV FH N +
Sbjct: 333 DISRLIRGNQLIKFEKDSYARIGVMPRYGDAE-SVMWFDVEPFCMFHFINCFEEGDEVVI 391
Query: 433 XXXXXCMTPADSI-------FNESD---------------EHLESVLTEIRLNTRTGEST 470
ADSI N++D E S L + RLNT+T +
Sbjct: 392 RG----FRAADSIIPGPRISLNKNDLLSDPSKCSVKQGINEEFFSRLYQWRLNTKTKAVS 447
Query: 471 RRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWP-----------KVSGFAKVDL 519
+ + + ++E ++N G YAY V + K G AK+ L
Sbjct: 448 GQYL--SGTEFSMEFPVINDHYTGLHHSYAYAQVVDSLESSYGVNEKVILKYGGLAKLCL 505
Query: 520 ---------ATGELTKFEY---GEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVRD 567
+ +L K EY GE +F FVP EDDG+I+SFV
Sbjct: 506 EEADNVIAETSEDLIKTEYHGFGEDQFFSGAAFVPRVG-------GSHEDDGWIISFVHI 558
Query: 568 EAAGTSELLVVNAADMRLEATVQLPSRVPYGFHGTF 603
A T E V A + LP RVPYGFHGTF
Sbjct: 559 IDAQTFEGAPV--------AKIVLPQRVPYGFHGTF 586
>Os10g0170700
Length = 245
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 17/168 (10%)
Query: 453 LESVLTE-IRLNTRTGESTRRAVLPPAAQVNLEVGMVNRAMLGRKTRYAYLAVAEPWPKV 511
L+S + + I +N RTG R A+ + +LE G++++ +GR RY Y V+ P P+
Sbjct: 85 LDSAMVDMIHINLRTGTVLRTAL----SLESLEFGVIHQGYVGRYNRYGYFGVSAPLPRF 140
Query: 512 SGFAKVDLAT-----GELTKFEYGEGRFGGEPCFVPMXXXXXXXSPARGEDDGYILSFVR 566
SG K+D A + + ++G G F GEP FVP + ED+GY++ +
Sbjct: 141 SGIRKLDFAMVGADDCTVARRDFGPGCFVGEPFFVP-----SNDNGDGNEDNGYVVCYTH 195
Query: 567 DEAAGTSELLVVNAADMRLE--ATVQLPSRVPYGFHGTFINAGELATQ 612
E G S+ +V++A LE A VQLP+RVPYGFHG FI EL +Q
Sbjct: 196 KEDTGESQFVVMDAMSPELEIVAAVQLPARVPYGFHGRFITQAELLSQ 243
>Os01g0566500 Similar to Dioxygenase RAMOSUS1
Length = 552
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 192/489 (39%), Gaps = 44/489 (8%)
Query: 146 LPVSGRIPPFINGVYARNGANP-HFEPTAGHHLFDGDGMVHAVRIRNGAAESYAC--RFT 202
LP+ G +PP++NG Y RNG A HHLFDG + V R G R
Sbjct: 81 LPIEGCLPPWLNGTYIRNGPGMWDVGEHAFHHLFDGYATLVRVSFRGGGGARATGAHRQI 140
Query: 203 ETARLGQERALGRAVFPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYF 262
E+ A GR V + E A+ L L GLV + T N+ ++
Sbjct: 141 ESEAYRAAVARGRPV----LREFSHCPAPAKSLLHRFGDLVGLVTGAALTDNPNSAVLPL 196
Query: 263 -NGRLLAMSEDDLPYQVRVTADGD-LETVGRYDFDGQLG-CAMIAHPKLDPVSGELFALS 319
+GR++ ++E + V D D LETVGR+ + +LG AHP + E L
Sbjct: 197 GDGRVMCLTETT---KSSVLIDPDTLETVGRFRYTDRLGGMVQSAHPIV--TDTEFLTLL 251
Query: 320 YDVIKKPYLKYFYFDADGTKSPDVEIELE---QPTMIHDFAITENFVVVPDHQVVFKLGE 376
D+++ +L + ++ P +H FA+TE + VVP+ + +
Sbjct: 252 PDLVRPGHLVVRMEAGSNERKVIGRMDCRGGPSPGWLHSFAVTEKYAVVPEMPLRYSSAS 311
Query: 377 MFRGG-SPV-VLDREKTSRFGVLPKHATSSLEMVWVDVPDCFCFHLWNAWXXXXXXXXXX 434
+ +P D S + ++ + V+VP H NA+
Sbjct: 312 LLASELAPFYAFDWVPASGSYMHVMCKSTGKTVASVEVPPFMAIHFINAYEEEGDEAAVV 371
Query: 435 XXXCMTPADSIFNESDEHLESVL---TEIRLNTRTGE-----------STRRAVLPPAAQ 480
C D E+ L ++ N R G A+ P
Sbjct: 372 VDCCEHYGDPAIIETLVLSRLRLLRGKDVLPNARVGRFRIPLDGSPFGELETALDPEEHG 431
Query: 481 VNLEVGMVNRAMLGRKTRYAYLAVAE-PWPKVSGFAKVDLATGELTKFEYGEGRFGGEPC 539
+++ +N A LGRK +YAY A P + K+DL + K + EG EP
Sbjct: 432 RGMDMCSINPARLGRKYQYAYACGARRPCNFPNTLTKIDLVEKK-AKSWHEEGSVPSEPF 490
Query: 540 FVPMXXXXXXXSPARGEDDGYILSFVRDEAAGTSELLVVNAADMRLEATVQLPSRVPYGF 599
FV A EDDG ++S V + G LV++A A V+ P +PYGF
Sbjct: 491 FV-------ARPGATDEDDGVVISIVSSDD-GEGYALVLDATTFEEIARVRFPYGLPYGF 542
Query: 600 HGTFINAGE 608
HG +I A E
Sbjct: 543 HGCWIPATE 551
>Os08g0371564 Carotenoid oxygenase family protein
Length = 278
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 117/250 (46%), Gaps = 32/250 (12%)
Query: 130 IAGNFAPVGEQPPVRSL-PVSGRIPP-FINGVYARNGANPHFEPTAGHHL---------- 177
+ NFAPV E + + G I F GVY RNG+NP F A H +
Sbjct: 41 VVSNFAPVDEIGGRTEIWRIEGTISDDFPEGVYIRNGSNPLF--GALHKVNSIFGQSEDI 98
Query: 178 -FDGDGMVHAV-----RIRNGAAESYACRFTETARLGQERALGRAVFPKAIGELHGHSGI 231
+G+GM+HA+ R N + SY R+ ++ ER R F AI G
Sbjct: 99 WVEGEGMLHALYFTKSREGNTWSVSYNNRYVQSDTFNTERDRQRPCFLSAI---KGDP-- 153
Query: 232 ARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTADGDLETVGR 291
LA+ A L L ++N G+ R+ +++E+D+PY++ + +L T+
Sbjct: 154 --LAIIAASILNMLRFGKVFRNMSNTGVFEHAERVFSVAENDIPYEIDLD---NLGTLCS 208
Query: 292 YDFDGQLGCAMIAHPKLDPVSGELFALSYDVIKKPYLKYFYFDADGTK-SPDVEIELEQP 350
+ DGQ AHPK+ P SGEL ++++ KP+L DG K V+++LE+
Sbjct: 209 WVVDGQWNMPFTAHPKVAPGSGELVIYGFNIV-KPFLTIGVVSEDGKKLERKVDLKLERC 267
Query: 351 TMIHDFAITE 360
T H+ +T+
Sbjct: 268 TYCHEIGVTK 277
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,384,162
Number of extensions: 876305
Number of successful extensions: 1831
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1782
Number of HSP's successfully gapped: 11
Length of query: 613
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 506
Effective length of database: 11,448,903
Effective search space: 5793144918
Effective search space used: 5793144918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)