Os01g0566500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dioxygenase RAMOSUS1.
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Os01g0566500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dioxygenase RAMOSUS1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 678.88 | 1.22 | 3.81 | 0.279 | 0.639 | 9.26 | -2.16 | 25.5 | 1.7 | 15.8 | 9.799 | 547 | -- | -- |
| 717.43 | 1.25 | 3.6 | 0.423 | 0.451 | 5.76 | -1.37 | -- | 2.01 | 15.9 | 10.3 | 465 | -- | -- |
| 689.42 | 1.22 | 3.81 | 0.161 | 0.637 | 9.07 | -- | 23.5 | 1.68 | 17 | 10.3 | 585 | -- | -- |
| 715.1 | 1.25 | 3.71 | 0.0765 | 0.496 | 5.55 | -- | -- | 1.71 | 16.2 | 10.34 | 427 | -- | -- |
| 710.08 | 1.24 | 3.8 | 0.284 | -- | 10.7 | -- | 29.2 | 1.69 | -- | 10.42 | 545 | -- | -- |
| 770.26 | 1.3 | 3.74 | -0.256 | 0.709 | -- | -2.36 | -- | 1.61 | 16.6 | -- | -- | -- | -- |
| 782.76 | 1.31 | 3.75 | -0.275 | 0.735 | -- | -- | -- | 1.6 | 17.6 | -- | -- | -- | -- |
| 730.25 | 1.26 | 3.72 | -0.0496 | -- | 5.36 | -- | -- | 1.69 | -- | 10.3 | 460 | -- | -- |
| 712.95 | 1.24 | 3.7 | -- | 0.581 | 5.19 | -- | -- | 1.74 | 17 | 10.3 | 427 | -- | -- |
| 810.83 | 1.33 | 3.74 | -0.298 | -- | -- | -- | -- | 1.58 | -- | -- | -- | -- | -- |
| 784.75 | 1.31 | 3.75 | -- | 0.74 | -- | -- | -- | 1.63 | 17.6 | -- | -- | -- | -- |
| 730.32 | 1.26 | 3.72 | -- | -- | 5.37 | -- | -- | 1.7 | -- | 10.3 | 459 | -- | -- |
| 813.18 | 1.33 | 3.74 | -- | -- | -- | -- | -- | 1.62 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 689.42 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 1 |
| 2 | 689.68 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 3 | 692.40 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 5 | 694.16 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 6 | 694.20 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 37 | 694.47 | wind | 9 | 720 | > th | dose dependent | rect. | 11 | 7 |
| 41 | 694.47 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 44 | 694.62 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 63 | 695.28 | wind | 9 | 720 | > th | dose dependent | sin | 20 | NA |
| 106 | 695.78 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 158 | 696.61 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 164 | 697.28 | wind | 9 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 251 | 702.03 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 22 |
| 262 | 703.14 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 15 |
| 273 | 703.52 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 17 |
| 274 | 703.60 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 7 |
| 275 | 703.62 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 4 |
| 279 | 703.92 | wind | 7 | 720 | < th | dose independent | rect. | 21 | 22 |
| 289 | 704.38 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 23 |
| 294 | 704.67 | wind | 9 | 720 | > th | dose independent | sin | 18 | NA |
| 311 | 705.16 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 20 |
| 315 | 705.23 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 20 |
| 323 | 705.55 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 9 |
| 360 | 705.80 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 23 |
| 388 | 706.02 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 394 | 706.10 | wind | 9 | 720 | > th | dose dependent | sin | 10 | NA |
| 404 | 706.25 | temperature | 25 | 270 | > th | dose independent | sin | 1 | NA |
| 420 | 706.64 | wind | 9 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 445 | 706.90 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 13 |
| 483 | 707.13 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 519 | 707.18 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 565 | 707.72 | temperature | 25 | 270 | < th | dose independent | sin | 1 | NA |
| 615 | 708.14 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 627 | 708.27 | wind | 7 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 635 | 708.47 | wind | 9 | 720 | < th | dose independent | sin | 14 | NA |
| 744 | 710.22 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 798 | 711.04 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 830 | 711.21 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 832 | 711.24 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 17 |
| 841 | 711.46 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 890 | 712.12 | wind | 9 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 894 | 712.18 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 15 |
| 905 | 712.34 | wind | 9 | 720 | < th | dose independent | sin | 2 | NA |
| 972 | 713.73 | wind | 7 | 720 | < th | dose independent | rect. | 23 | 18 |