Os12g0640600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Crocetin dialdehyde.
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Os12g0640600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Crocetin dialdehyde.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.9 | 0.345 | 13.1 | -0.288 | 2.01 | 0.765 | 0.772 | 0.13 | -0.433 | 9.51 | 75.2 | 802 | -- | -- |
| 53.78 | 0.342 | 13.1 | -0.287 | 1.97 | 0.807 | 0.744 | -- | -0.442 | 9.67 | 76.61 | 905 | -- | -- |
| 55.45 | 0.347 | 13.1 | -0.295 | 2.02 | 0.827 | -- | -0.404 | -0.448 | 9.61 | 78.8 | 880 | -- | -- |
| 55.65 | 0.347 | 13.1 | -0.267 | 1.98 | 0.804 | -- | -- | -0.447 | 9.66 | 77.77 | 910 | -- | -- |
| 211.89 | 0.682 | 13.1 | -0.196 | -- | 1.21 | -- | -0.196 | -0.423 | -- | 78.8 | 880 | -- | -- |
| 66.05 | 0.381 | 13.1 | -0.169 | 1.73 | -- | 0.56 | -- | -0.49 | 9.67 | -- | -- | -- | -- |
| 67.23 | 0.384 | 13.1 | -0.149 | 1.73 | -- | -- | -- | -0.489 | 9.65 | -- | -- | -- | -- |
| 211.95 | 0.681 | 13.1 | -0.196 | -- | 1.2 | -- | -- | -0.424 | -- | 78.8 | 880 | -- | -- |
| 57.5 | 0.353 | 13.1 | -- | 2 | 0.794 | -- | -- | -0.428 | 9.65 | 79.06 | 905 | -- | -- |
| 243.8 | 0.73 | 13.1 | -0.163 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 67.81 | 0.385 | 13.1 | -- | 1.73 | -- | -- | -- | -0.473 | 9.66 | -- | -- | -- | -- |
| 211.84 | 0.68 | 13.1 | -- | -- | 1.18 | -- | -- | -0.407 | -- | 80.44 | 7261 | -- | -- |
| 244.5 | 0.73 | 13.1 | -- | -- | -- | -- | -- | -0.468 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.94 | humidity | 70 | 720 | < th | dose dependent | rect. | 14 | 21 |
| 5 | 54.06 | humidity | 70 | 720 | < th | dose dependent | sin | 18 | NA |
| 15 | 54.18 | humidity | 70 | 720 | < th | dose dependent | rect. | 14 | 4 |
| 17 | 54.22 | humidity | 70 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 26 | 54.26 | humidity | 70 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 94 | 54.35 | humidity | 70 | 720 | < th | dose dependent | rect. | 15 | 2 |
| 126 | 54.38 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 4 |
| 127 | 54.38 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 14 |
| 142 | 54.39 | humidity | 70 | 720 | < th | dose dependent | no | NA | NA |
| 281 | 54.48 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 12 |
| 380 | 54.62 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 382 | 54.62 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 408 | 54.70 | humidity | 60 | 720 | > th | dose independent | rect. | 1 | 18 |
| 414 | 54.73 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 417 | 54.75 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 420 | 54.77 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 22 |
| 433 | 54.83 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 10 |
| 434 | 54.83 | humidity | 60 | 720 | < th | dose independent | rect. | 14 | 21 |
| 435 | 54.84 | humidity | 70 | 90 | > th | dose independent | sin | 17 | NA |
| 436 | 54.85 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 14 |
| 438 | 54.85 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 22 |
| 444 | 54.86 | humidity | 60 | 720 | > th | dose independent | rect. | 22 | 21 |
| 445 | 54.86 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 446 | 54.87 | humidity | 60 | 720 | > th | dose independent | rect. | 7 | 16 |
| 448 | 54.88 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 8 |
| 455 | 54.91 | humidity | 60 | 720 | > th | dose independent | rect. | 14 | 7 |
| 460 | 54.92 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 468 | 54.96 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 511 | 55.08 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 19 |
| 519 | 55.10 | humidity | 60 | 720 | > th | dose independent | sin | 16 | NA |
| 704 | 55.22 | humidity | 60 | 720 | > th | dose independent | rect. | 22 | 23 |
| 715 | 55.24 | humidity | 60 | 720 | < th | dose independent | sin | 18 | NA |
| 749 | 55.27 | humidity | 60 | 720 | < th | dose independent | rect. | 14 | 5 |
| 759 | 55.30 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 795 | 55.38 | humidity | 60 | 720 | > th | dose independent | rect. | 24 | 23 |
| 796 | 55.38 | humidity | 80 | 30 | < th | dose dependent | sin | 15 | NA |
| 813 | 55.40 | humidity | 60 | 720 | > th | dose independent | rect. | 11 | 17 |
| 822 | 55.43 | humidity | 60 | 720 | > th | dose independent | rect. | 9 | 18 |
| 828 | 55.44 | humidity | 60 | 720 | < th | dose independent | rect. | 10 | 9 |
| 840 | 55.44 | humidity | 60 | 720 | < th | dose independent | rect. | 10 | 23 |
| 846 | 55.45 | humidity | 50 | 720 | > th | dose dependent | sin | 20 | NA |
| 847 | 55.45 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 916 | 55.51 | humidity | 60 | 720 | < th | dose independent | no | NA | NA |