Os12g0435200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Zeaxanthin cleavage oxygenase.
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Os12g0435200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Zeaxanthin cleavage oxygenase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.59 | 0.805 | 3.3 | -1.16 | 0.722 | -0.27 | -0.61 | 2.24 | -0.479 | 11 | 24.5 | 154 | -- | -- |
| 312.3 | 0.829 | 3.22 | -0.417 | 0.735 | -0.0629 | -1.15 | -- | -0.175 | 11.7 | 24.5 | 154 | -- | -- |
| 295.03 | 0.8 | 3.31 | -1.21 | 0.723 | -0.265 | -- | 2.36 | -0.489 | 11 | 24.5 | 147 | -- | -- |
| 317.11 | 0.829 | 3.22 | -0.476 | 0.715 | -0.127 | -- | -- | -0.186 | 11.2 | 24.7 | 188 | -- | -- |
| 325.9 | 0.841 | 3.37 | -1.34 | -- | -0.423 | -- | 2.68 | -0.625 | -- | 24.6 | 101 | -- | -- |
| 312.58 | 0.829 | 3.21 | -0.397 | 0.759 | -- | -1.15 | -- | -0.14 | 11.8 | -- | -- | -- | -- |
| 318.22 | 0.835 | 3.21 | -0.445 | 0.765 | -- | -- | -- | -0.146 | 11.5 | -- | -- | -- | -- |
| 347.13 | 0.868 | 3.27 | -0.586 | -- | -0.26 | -- | -- | -0.337 | -- | 24.7 | 38 | -- | -- |
| 320.24 | 0.833 | 3.2 | -- | 0.834 | 0.337 | -- | -- | -0.0841 | 12.3 | 29.4 | 359 | -- | -- |
| 355.02 | 0.88 | 3.23 | -0.466 | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
| 323.43 | 0.841 | 3.2 | -- | 0.77 | -- | -- | -- | -0.0965 | 11.6 | -- | -- | -- | -- |
| 347.11 | 0.868 | 3.23 | -- | -- | 0.545 | -- | -- | -0.0835 | -- | 29.1 | 1008 | -- | -- |
| 360.74 | 0.887 | 3.22 | -- | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 285.93 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 3 | 288.35 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 5 | 289.22 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 6 | 290.17 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 17 | 290.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 3 |
| 23 | 290.49 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 28 | 290.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 29 | 290.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 30 | 290.84 | humidity | 80.0 | 270 | < th | dose independent | rect. | 1 | 13 |
| 31 | 290.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 39 | 291.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 40 | 291.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 43 | 291.78 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 44 | 291.82 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 47 | 291.89 | humidity | 80.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 49 | 292.02 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 7 | 8 |
| 50 | 292.12 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 62 | 292.12 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 74 | 292.13 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 14 |
| 75 | 292.16 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 76 | 292.18 | humidity | 80.0 | 270 | < th | dose independent | sin | 4 | NA |
| 80 | 292.23 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 84 | 292.26 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 99 | 292.49 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 6 |
| 101 | 292.49 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 8 |
| 117 | 292.71 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 120 | 292.73 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 10 |
| 131 | 292.84 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 8 |
| 158 | 293.24 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 162 | 293.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 163 | 293.37 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 164 | 293.37 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 167 | 293.37 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 174 | 293.41 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 176 | 293.42 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 182 | 293.43 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 186 | 293.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 188 | 293.45 | humidity | 80.0 | 270 | > th | dose independent | sin | 4 | NA |
| 190 | 293.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 191 | 293.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 10 | 6 |
| 205 | 293.63 | wind | 3.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 230 | 293.86 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 240 | 293.96 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 245 | 293.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 260 | 294.04 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 11 | 3 |
| 266 | 294.11 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 271 | 294.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 272 | 294.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 274 | 294.17 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 279 | 294.20 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 283 | 294.22 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 295 | 294.26 | wind | 3.0 | 10 | > th | dose dependent | rect. | 2 | 5 |
| 296 | 294.28 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 297 | 294.28 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 303 | 294.28 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 312 | 294.28 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 374 | 294.31 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 442 | 294.34 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 477 | 294.34 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 523 | 294.40 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 545 | 294.47 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 552 | 294.49 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 559 | 294.54 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 575 | 294.68 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 586 | 294.72 | wind | 3.0 | 30 | > th | dose independent | rect. | 5 | 2 |
| 605 | 294.84 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 613 | 294.89 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 7 |
| 617 | 294.92 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 619 | 294.93 | radiation | 10.0 | 720 | < th | dose independent | rect. | 2 | 6 |
| 625 | 294.96 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 626 | 294.96 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 640 | 295.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 641 | 295.01 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 23 |
| 643 | 295.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 644 | 295.02 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 646 | 295.02 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 22 |
| 650 | 295.06 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 663 | 295.15 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 665 | 295.15 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 678 | 295.21 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 680 | 295.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 702 | 295.28 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 741 | 295.37 | temperature | 25.0 | 90 | > th | dose independent | rect. | 11 | 20 |
| 773 | 295.54 | humidity | 80.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 776 | 295.55 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 782 | 295.59 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 788 | 295.60 | radiation | 1.0 | 10 | < th | dose independent | rect. | 7 | 5 |
| 813 | 295.67 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 6 |
| 816 | 295.68 | humidity | 80.0 | 90 | < th | dose independent | rect. | 11 | 3 |
| 838 | 295.75 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 4 |
| 844 | 295.75 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 4 |
| 859 | 295.76 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 22 |
| 864 | 295.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 869 | 295.80 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 909 | 295.93 | temperature | 20.0 | 270 | < th | dose dependent | sin | 23 | NA |
| 914 | 295.96 | wind | 3.0 | 10 | > th | dose independent | rect. | 2 | 5 |
| 965 | 296.03 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 966 | 296.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 967 | 296.03 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 18 |
| 982 | 296.08 | temperature | 25.0 | 10 | > th | dose independent | rect. | 11 | 22 |