BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0571100 Os12g0571100|AK105219
         (78 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0571100  Similar to Metallothionein-like protein type 1       98   1e-21
Os12g0567800  Plant metallothionein, family 15 protein             88   1e-18
Os12g0570700  Similar to Metallothionein-like protein type 1       81   2e-16
Os12g0571000  Plant metallothionein, family 15 protein             77   2e-15
Os03g0288000  Similar to Metallothionein                           71   2e-13
Os11g0704500  Metallothionein-like protein type 1                  69   7e-13

>Os12g0571100 Similar to Metallothionein-like protein type 1
          Length = 78

 Score = 97.8 bits (242), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 50/59 (84%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78
          KMYPDLAEKI         VLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC
Sbjct: 20 KMYPDLAEKITTTTTTATTVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78



>Os12g0567800 Plant metallothionein, family 15 protein
          Length = 78

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 47/59 (79%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78
          KMYPDLAEKI         VLGVAPEKG  EGVGKAAESGE AHGCSCGSSC+CNPCNC
Sbjct: 20 KMYPDLAEKITITTTTTTTVLGVAPEKGQFEGVGKAAESGEGAHGCSCGSSCKCNPCNC 78



>Os12g0570700 Similar to Metallothionein-like protein type 1
          Length = 78

 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/59 (72%), Positives = 44/59 (74%), Gaps = 2/59 (3%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78
           MYPDLAEK          VLGVAP K   EGVGKAAESGEAAHGCSCGSSC+CNPCNC
Sbjct: 22 NMYPDLAEKTTNTSATM--VLGVAPAKEQFEGVGKAAESGEAAHGCSCGSSCKCNPCNC 78



>Os12g0571000 Plant metallothionein, family 15 protein
          Length = 65

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAE-SGEAAHGCSCGSSCRCNPCNC 78
          KMYPDLAEK          +LGVAPEKG  E V +AA  SGEA HGCSCGSSC+CNPCNC
Sbjct: 6  KMYPDLAEKNTTITTSDTMILGVAPEKGRGEAVFEAAAGSGEADHGCSCGSSCKCNPCNC 65



>Os03g0288000 Similar to Metallothionein
          Length = 72

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 40/59 (67%), Gaps = 5/59 (8%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78
          KMYPDL EK          VLGVAPEK H E    AAESGE AHGC CGSSC+CNPCNC
Sbjct: 19 KMYPDLEEK--SSSAQATVVLGVAPEKAHFEA---AAESGETAHGCGCGSSCKCNPCNC 72



>Os11g0704500 Metallothionein-like protein type 1
          Length = 74

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 40/59 (67%), Gaps = 3/59 (5%)

Query: 20 KMYPDLAEKIXXXXXXXXXVLGVAPEKGHSEGVGKAAESGEAAHGCSCGSSCRCNPCNC 78
          K YPDL EK          VLGVAPEK  ++    AAESGE AHGCSCGSSCRCNPCNC
Sbjct: 19 KKYPDLEEK--SSSTKATVVLGVAPEK-KAQQFEAAAESGETAHGCSCGSSCRCNPCNC 74



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.132    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 1,940,745
Number of extensions: 47699
Number of successful extensions: 252
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 8
Length of query: 78
Length of database: 17,035,801
Length adjustment: 49
Effective length of query: 29
Effective length of database: 14,477,315
Effective search space: 419842135
Effective search space used: 419842135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 149 (62.0 bits)