Os11g0704500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallothionein-like protein type 1.
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Os11g0704500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallothionein-like protein type 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103.7 | 0.478 | 14.8 | 0.169 | 0.614 | 0.746 | 0.821 | -13.4 | 0.407 | 0.866 | 30.66 | 1575 | -- | -- |
| 110.65 | 0.49 | 14.6 | 2.23 | 0.6 | -0.595 | 0.753 | -- | 0.471 | 0.984 | 28.18 | 2924 | -- | -- |
| 106.2 | 0.48 | 14.8 | 0.174 | 0.621 | 0.747 | -- | -13.5 | 0.404 | 1.33 | 30.94 | 1585 | -- | -- |
| 111.53 | 0.492 | 14.6 | 2.28 | 0.579 | -0.754 | -- | -- | 0.579 | 1.11 | 25.8 | 3182 | -- | -- |
| 129.25 | 0.529 | 14.8 | 0.201 | -- | 0.813 | -- | -13.6 | 0.421 | -- | 30.39 | 1663 | -- | -- |
| 130.47 | 0.535 | 14.6 | 1.94 | 0.556 | -- | 0.757 | -- | 0.536 | 0.606 | -- | -- | -- | -- |
| 132.57 | 0.539 | 14.6 | 1.91 | 0.562 | -- | -- | -- | 0.531 | 1.16 | -- | -- | -- | -- |
| 128.64 | 0.531 | 14.5 | 2.09 | -- | -0.968 | -- | -- | 0.664 | -- | 23.51 | 13267 | -- | -- |
| 223.88 | 0.697 | 14.6 | -- | 0.625 | -0.371 | -- | -- | 0.267 | 1.28 | 28.8 | 3209 | -- | -- |
| 152.13 | 0.576 | 14.5 | 1.93 | -- | -- | -- | -- | 0.542 | -- | -- | -- | -- | -- |
| 228.75 | 0.707 | 14.6 | -- | 0.594 | -- | -- | -- | 0.318 | 1.29 | -- | -- | -- | -- |
| 204.96 | 0.667 | 14.7 | -- | -- | 1.08 | -- | -- | -0.00114 | -- | 8.512 | 47136 | -- | -- |
| 250.57 | 0.739 | 14.6 | -- | -- | -- | -- | -- | 0.328 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 103.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 17 |
| 2 | 103.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 17 |
| 3 | 103.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 4 | 104.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 6 | 104.24 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 4 |
| 7 | 104.28 | temperature | 30 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 8 | 104.30 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 17 |
| 14 | 104.36 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 17 | 104.39 | temperature | 30 | 1440 | > th | dose dependent | rect. | 9 | 7 |
| 36 | 104.43 | temperature | 30 | 1440 | > th | dose dependent | sin | 0 | NA |
| 72 | 104.46 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 23 |
| 76 | 104.49 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 166 | 104.49 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 267 | 104.70 | temperature | 30 | 1440 | > th | dose dependent | sin | 9 | NA |
| 272 | 104.74 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 360 | 105.24 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 364 | 105.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 368 | 105.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 373 | 105.41 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 422 | 105.67 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 426 | 105.74 | temperature | 30 | 1440 | > th | dose independent | sin | 10 | NA |
| 444 | 105.77 | temperature | 25 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 452 | 105.84 | temperature | 30 | 1440 | < th | dose independent | sin | 10 | NA |
| 453 | 105.85 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 461 | 105.91 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 465 | 105.93 | temperature | 30 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 473 | 105.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 476 | 106.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 477 | 106.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 479 | 106.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 482 | 106.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 514 | 106.10 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 517 | 106.11 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 525 | 106.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 14 |
| 531 | 106.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 9 |
| 552 | 106.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 555 | 106.19 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 608 | 106.33 | temperature | 25 | 14400 | > th | dose dependent | rect. | 19 | 15 |
| 754 | 106.72 | temperature | 30 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 806 | 106.85 | temperature | 30 | 14400 | > th | dose dependent | sin | 8 | NA |
| 909 | 106.99 | temperature | 30 | 14400 | < th | dose independent | sin | 8 | NA |