BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0277000 Os12g0277000|AK099846
(843 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0277000 U box domain containing protein 1599 0.0
Os12g0277400 U box domain containing protein 616 e-176
Os03g0657100 U box domain containing protein 571 e-163
Os06g0275700 U box domain containing protein 314 2e-85
Os02g0727300 U box domain containing protein 301 1e-81
Os01g0948500 Armadillo-like helical domain containing protein 145 1e-34
Os08g0481200 Similar to Arm repeat containing protein 77 6e-14
Os02g0732200 U box domain containing protein 70 5e-12
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 70 6e-12
>Os12g0277000 U box domain containing protein
Length = 843
Score = 1599 bits (4140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 793/843 (94%), Positives = 793/843 (94%)
Query: 1 MAQRRQGSQRQEQAWWVAEGARDWCXXXXXXXXXXXXXXXXXVLSAFLCPITMEVMRDPV 60
MAQRRQGSQRQEQAWWVAEGARDWC VLSAFLCPITMEVMRDPV
Sbjct: 1 MAQRRQGSQRQEQAWWVAEGARDWCGEGSDDGEEGEEEEEDGVLSAFLCPITMEVMRDPV 60
Query: 61 VVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVALRAAIEEWTSRRET 120
VVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVALRAAIEEWTSRRET
Sbjct: 61 VVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVALRAAIEEWTSRRET 120
Query: 121 AALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGMVPMVAAMLRNGSARV 180
AALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGMVPMVAAMLRNGSARV
Sbjct: 121 AALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGMVPMVAAMLRNGSARV 180
Query: 181 RLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQERELAVSLLCELSKSEMVC 240
RLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQERELAVSLLCELSKSEMVC
Sbjct: 181 RLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQERELAVSLLCELSKSEMVC 240
Query: 241 EKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVLQMAENGRLEPLLNLL 300
EKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVLQMAENGRLEPLLNLL
Sbjct: 241 EKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVLQMAENGRLEPLLNLL 300
Query: 301 IEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVENGTLPAKEVAFKVLDHIST 360
IEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVENGTLPAKEVAFKVLDHIST
Sbjct: 301 IEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVENGTLPAKEVAFKVLDHIST 360
Query: 361 NTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNLVACGIDFGTVPLDGNR 420
NTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNLVACGIDFGTVPLDGNR
Sbjct: 361 NTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNLVACGIDFGTVPLDGNR 420
Query: 421 TIVSEDIVHSLLHLISNTSPPIQCKLLEIFVMXXXXXXXXXXXXXXXXXXXXXTNLVQFV 480
TIVSEDIVHSLLHLISNTSPPIQCKLLEIFVM TNLVQFV
Sbjct: 421 TIVSEDIVHSLLHLISNTSPPIQCKLLEIFVMLSSSTTTVLSIISAIRSSGAITNLVQFV 480
Query: 481 ESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVRIVSXXXXXXXXXXXXLQI 540
ESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVRIVS LQI
Sbjct: 481 ESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVRIVSENDANADEQDAALQI 540
Query: 541 LANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNIVDNTMLEGLVKVLARITYIL 600
LANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNIVDNTMLEGLVKVLARITYIL
Sbjct: 541 LANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNIVDNTMLEGLVKVLARITYIL 600
Query: 601 REEPRCVALAREYNLASLFTSLLRLNGLDGVQLLSAKALVNLSVESRYMTGTPNFDEHEQ 660
REEPRCVALAREYNLASLFTSLLRLNGLDGVQLLSAKALVNLSVESRYMTGTPNFDEHEQ
Sbjct: 601 REEPRCVALAREYNLASLFTSLLRLNGLDGVQLLSAKALVNLSVESRYMTGTPNFDEHEQ 660
Query: 661 KSGLTWFGKKPPGIQLCRVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEASLAAL 720
KSGLTWFGKKPPGIQLCRVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEASLAAL
Sbjct: 661 KSGLTWFGKKPPGIQLCRVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEASLAAL 720
Query: 721 CTLLGDGVEITEGVSVLYMANAVEPIFEILKGNPTGTLQQRVTWAVERILRAENIAKAAS 780
CTLLGDGVEITEGVSVLYMANAVEPIFEILKGNPTGTLQQRVTWAVERILRAENIAKAAS
Sbjct: 721 CTLLGDGVEITEGVSVLYMANAVEPIFEILKGNPTGTLQQRVTWAVERILRAENIAKAAS 780
Query: 781 SDRGLSSALVHAFQNGDSRTRRIAEASLKHINKLPTFSQIIDKHPSRRGSSIGSMERYFR 840
SDRGLSSALVHAFQNGDSRTRRIAEASLKHINKLPTFSQIIDKHPSRRGSSIGSMERYFR
Sbjct: 781 SDRGLSSALVHAFQNGDSRTRRIAEASLKHINKLPTFSQIIDKHPSRRGSSIGSMERYFR 840
Query: 841 SDR 843
SDR
Sbjct: 841 SDR 843
>Os12g0277400 U box domain containing protein
Length = 806
Score = 616 bits (1589), Expect = e-176, Method: Compositional matrix adjust.
Identities = 362/783 (46%), Positives = 498/783 (63%), Gaps = 3/783 (0%)
Query: 43 VLSAFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVK 102
+ +FLCP++ +VMRDPV +E+G FEREAI +WF + S G CPVT + + ++
Sbjct: 21 IYESFLCPLSKQVMRDPVTIESGATFEREAILKWFKDNGSGGRRLVCPVTNKELSSTELN 80
Query: 103 PVVALRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRR 162
P +ALR I+EW R E A L A + LT SE + L+ L+ V + +R + +VR+
Sbjct: 81 PSIALRNTIDEWMHRNEAAKLDVARKSLTSDCSEGDILQALEYVAEICQRSRSSRHLVRK 140
Query: 163 DGMVPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQE 222
G++ ++ +L+N S +VR KAL +LR A+ D++ ++ ++ GD IR IVKF++ QE
Sbjct: 141 VGLISLITDLLKNSSPKVRQKALGSLRFVAKNDNDNKNEIAAGDNIRTIVKFLNHGHSQE 200
Query: 223 RELAVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEK 282
+E AVSLL ELS+ + + EKI ++GAILIL ++ SK +N + AE TLENLE CEK
Sbjct: 201 KEQAVSLLYELSEYKPLSEKIGSVSGAILILVGLSSSKVENLLTVDRAEKTLENLESCEK 260
Query: 283 NVLQMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVEN 342
NV QMAENGRL+PLL LL+EGS + QL +A+ L ++VLSND+K LVAQ G ++++
Sbjct: 261 NVRQMAENGRLQPLLRLLLEGSSDTQLSMAAHLGELVLSNDVKVLVAQTAGSTLVNIMKS 320
Query: 343 GTLPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLS 402
G A+E A K L+ IS+ SAK+LIE GIL PL L G LP RL+E +A +L+
Sbjct: 321 GNREAREAALKALNQISSYDTSAKILIEAGILPPLITDLFTVGSNQLPMRLKEVSATILA 380
Query: 403 NLVACGIDFGTVPLDGNR-TIVSEDIVHSLLHLISNTSPPIQCKLLEIFVMXXXXXXXXX 461
N+VA G F +VPLD NR +VSE+IVH+LLHLISNT P I+CKLL++ V
Sbjct: 381 NIVASGASFESVPLDHNRQNLVSEEIVHNLLHLISNTGPAIECKLLQVLVGLTTSATTVQ 440
Query: 462 XXXXXXXXXXXXTNLVQFVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLV 521
+L+QFVE+ +E R ASIKLL IS M E+A+ R + + L LV
Sbjct: 441 SIVDAIKSSGATVSLIQFVEAPQREVRLASIKLLNNISPFMGQELAEAFRGNFSQLSSLV 500
Query: 522 RIVSXXXXXXXXXXXXLQILANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNIV 581
R+++ ++A+LP RD LT L++ GAF I KV + +
Sbjct: 501 RVIADNNGISEEQAAAAGLIADLPPRDSVLTRRLLQDGAFSTIITKVTMVRQGDIRGGRF 560
Query: 582 DNTMLEGLVKVLARITYILREEPRCVALAREYNLASLFTSLLRLNGLDGVQLLSAKALVN 641
N LEGLV+V++RIT+IL ++ + +AR+YNL LFT LL++NGLD VQ++SA AL N
Sbjct: 561 VNPFLEGLVRVVSRITFIL-DDLDIIDVARDYNLTPLFTDLLQMNGLDTVQIVSATALEN 619
Query: 642 LSVESRYMTG-TPNFDEHEQKSGLTWFGKKPPGIQLCRVHSGICSIRDNFCILEGKAVER 700
LS +S+ +T P + S +K CRVH GICS R++FC+LEGKAVE+
Sbjct: 620 LSRQSKLLTRIVPAPNPGFCFSIFPCLSQKSVATGACRVHVGICSARESFCLLEGKAVEK 679
Query: 701 LVVCLSHQNKKVVEASLAALCTLLGDGVEITEGVSVLYMANAVEPIFEILKGNPTGTLQQ 760
LV CL H N+KVVEA+LAAL TLL DGV+I +GV VL A V PI E+L N L+Q
Sbjct: 680 LVACLDHNNEKVVEAALAALSTLLEDGVDIEQGVMVLCDAEGVNPILEVLCENRNEALRQ 739
Query: 761 RVTWAVERILRAENIAKAASSDRGLSSALVHAFQNGDSRTRRIAEASLKHINKLPTFSQI 820
R WAVERILR + IA S ++ + +ALV AF++GDSRTR+IAE +LKH++KLP FS I
Sbjct: 740 RAVWAVERILRIDEIAYEISGNQNVGTALVEAFRHGDSRTRQIAERALKHVDKLPNFSGI 799
Query: 821 IDK 823
K
Sbjct: 800 FSK 802
>Os03g0657100 U box domain containing protein
Length = 824
Score = 571 bits (1472), Expect = e-163, Method: Compositional matrix adjust.
Identities = 344/808 (42%), Positives = 478/808 (59%), Gaps = 39/808 (4%)
Query: 44 LSAFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKP 103
AF+CP+T +VMRDPV +ETG FEREAI +WF EC G P CP+T + +V P
Sbjct: 15 FEAFVCPLTKQVMRDPVTIETGQTFEREAILKWFRECRDNGRRPTCPLTQRELRDTEVSP 74
Query: 104 VVALRAAIEEWTSRRETAALRRACRWLT-----KAASEKE---ALRGLDAVMRGWKLARV 155
VALR+ I EW +R E L RAC L A E+E ALR L V + + +
Sbjct: 75 SVALRSVIHEWRARNEEKDLDRACASLVGGFAGHAGDEEEEESALRALVHVSQICQRSAA 134
Query: 156 GKRVVRRDGMVPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFI 215
K +VRR G++ VA ML++GS R+RLK+LQ LR ++D+ ++ + +GDTIR I+KF+
Sbjct: 135 SKDLVRRRGVLRAVAEMLKSGSRRLRLKSLQVLRVLVEDNDDNKEELGKGDTIRTIIKFL 194
Query: 216 DFEDCQERELAVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLE 275
E QERELAVSLL ELS E CE+I + GAIL+L + SKS++ ++AE TL
Sbjct: 195 SNEHVQERELAVSLLHELSGHEPTCERIGAVYGAILLLVGMGSSKSESAVAVDKAESTLR 254
Query: 276 NLEKCEKNVLQMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLL 335
NL++ + NV QMA+NGRL+PLL L+ G P+ ++ +A L ++ L+ND K VA++ G L
Sbjct: 255 NLDRFDANVKQMADNGRLQPLLTRLLRGEPDTRVAMADYLGELALANDDKAAVAEQAGPL 314
Query: 336 FAGVVENGTLPAKEVAFKVLDHISTNTESAKVLIE-DGILLPLFR-VLSVDGVKFLPPRL 393
G++ G PAKE K L IS++ SAK+L++ G+L PL VL G LP +L
Sbjct: 315 LVGMLRTGATPAKEATLKALREISSSEASAKLLLQRAGVLPPLVNDVLFSTG--HLPMKL 372
Query: 394 QEAAAAVLSNLVACGIDFGTVPL-------------DGNRTIVSEDIVHSLLHLISNTSP 440
+E AA +L+NLVA G DF ++PL RT++SED+VHS LHLISNT P
Sbjct: 373 KELAATILANLVASGADFRSIPLDDDEDDDGGGGGRGRRRTLLSEDVVHSQLHLISNTGP 432
Query: 441 PIQCKLLEIFVMXXXXXXXXXXXXXXXXXXXXXTNLVQFVESDHQESRAASIKLLCKISF 500
I C+LL + +L+QF+E+ H++ R S+KLL ++
Sbjct: 433 AIGCRLLSVLAGLTSSRATVADVVAAVKSSGATISLIQFIEAAHRDIRVESLKLLRNLAP 492
Query: 501 DMDHEIAQVLRSSPTLLGCLVR-IVSXXXXXXXXXXXXLQILANLPKRDRRLTMELMEQG 559
M E+A L S L L+R I S + +L +LP+ D LT +L + G
Sbjct: 493 YMGAELADALGGS---LSSLLRAISSDGGGVTEEQAAAVGLLGDLPEGDSSLTRQLFDLG 549
Query: 560 AFKYIARKVLNICRRGT--ANNIVDNTMLEGLVKVLARITYILREEPRCVALAREYNLAS 617
AF+ +A K+ + RRGT N + EG+VKV+ R+T L E+ V ARE LA
Sbjct: 550 AFRALAPKLAEL-RRGTIRGGNRYVTPLTEGVVKVMYRVTCALEEDAEYVEFAREAGLAP 608
Query: 618 LFTSLLRLNGLDGVQLLSAKALVNLSVESRYMTGTPNFDEHEQKSGLTWFG----KKPPG 673
LF LL NG+D VQL SA AL LS++S ++T P G G
Sbjct: 609 LFVELLHTNGMDTVQLYSAMALEKLSLQSSHLTAIPAPPSPPAGFGCACLGRRPAAAAVP 668
Query: 674 IQLCRVHSGICSIRDNFCILE---GKAVERLVVCLSHQNKKVVEASLAALCTLLGDGVEI 730
+CRVH G CS+R+ FC+ + GKAVERLV CL H + +VVEA+LAAL TL+ DGV+
Sbjct: 669 AGVCRVHGGFCSLRETFCLAQADGGKAVERLVACLDHLDGRVVEAALAALSTLVCDGVDA 728
Query: 731 TEGVSVLYMANAVEPIFEILKGNPTGTLQQRVTWAVERILRAENIAKAASSDRGLSSALV 790
EGV VL A+ + P+ +I+ + T LQ+R WAVERILR E IA ++D+ ++SALV
Sbjct: 729 REGVVVLGEADGLRPVVDIMVESRTEALQRRAVWAVERILRVEEIAGEVAADQTVASALV 788
Query: 791 HAFQNGDSRTRRIAEASLKHINKLPTFS 818
A++NGD RTR+ AE +L+H++++P FS
Sbjct: 789 EAYRNGDPRTRQTAERALRHLDRIPNFS 816
>Os06g0275700 U box domain containing protein
Length = 973
Score = 314 bits (804), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 238/805 (29%), Positives = 402/805 (49%), Gaps = 31/805 (3%)
Query: 43 VLSAFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVK 102
+ +F CP+T +VM DPV E+G ++R+AI +F + A CPVT + ++
Sbjct: 163 LYDSFFCPLTNKVMVDPVTTESGVTYDRKAIEEYFEKFADGSEPVVCPVTKMSMQSKALR 222
Query: 103 PVVALRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRR 162
V L++ I EW R E +R A L+ A++E L + + K+ R + + +
Sbjct: 223 SNVPLKSTIAEWIMRNEATRVRIARTALSMASTEAMLLEAIQELKLLAKIRRKNREQMHK 282
Query: 163 DGMVPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQE 222
G+ + +L + +R +L L A ED+ ++ ++ I R +K + E
Sbjct: 283 IGITKFLPRLLEHKDGLIRCDSLDLLCLLA-EDETGKEVIANTRAITRTIKLLSSNSPDE 341
Query: 223 RELAVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEK 282
R A+S L ELSKSE++ E I +G+IL+L + + S +P AE+A L+NLE C K
Sbjct: 342 RHAAISFLLELSKSELLLENIGSTSGSILMLTTMKFNDSDDPVAAEKAGEVLKNLENCPK 401
Query: 283 NVLQMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVEN 342
N+ MAE+G L+PL L+EGS + Q+ + S L ++V ++ +A + +V +
Sbjct: 402 NIKYMAESGYLDPLQRHLVEGSEDVQMEMVSYLGELVQKQEMTINIAGSASEILIKMVHS 461
Query: 343 GTLPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLS 402
G ++ A VL IS++ ++K L++ G + + L + + P + AAAVL+
Sbjct: 462 GNTVIRKAALDVLVQISSDGPNSKTLVDAGAVPVMVEELFIRKIDDEPMGSKTEAAAVLA 521
Query: 403 NLVACGIDFGTVPLDG-NRTIVSEDIVHSLLHLISNTSP-PIQCKLLEIFVMXXXXXXXX 460
N+V G+D T+ ++ I S+ V++ H++ + P + ++ + +
Sbjct: 522 NIVESGLDPDTIVVNKEGHVITSKYSVYNFTHMLKCSMPDDLNLSIIRVLLALTALPKPL 581
Query: 461 XXXXXXXXXXXXXTNLVQFVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCL 520
+++F+ S + ++ +LL +S M H IA+ L +P G L
Sbjct: 582 MTVVSVMKEQDSSLTVIEFMGSKTEALGISATRLLIALSPQMGHTIAEKLCKAPGQPGRL 641
Query: 521 VRIVSXXXXXXXXXXXXLQILANLPKRDRRLTMELMEQGAFKYIARKVLNICRRGTANNI 580
V+ + +LA LP ++ L + L+EQGA + K+ + R +
Sbjct: 642 VKSIGQPGRVTERHAVAATLLARLPYQNITLNLALLEQGAVPTLLAKIEEMQRGEMRVSR 701
Query: 581 VDNTMLEGLVKVLARITYILREEPRCVALAREYNLASLFTSLL-RLNGLDGVQLLSAKAL 639
T +EGLV L R+T L +P + A ++N ++ T LL R G D VQ L+A L
Sbjct: 702 HAKTYMEGLVGALVRMTMTLY-DPDVLLAAMDHNFTAVLTDLLVRSAGSDEVQRLAAVGL 760
Query: 640 VNLSVESRYMTGTPNFDEHEQKSG-------------LTWFGKKPPGI----QLCRVHSG 682
NLS +S ++ P+ ++ K + +KPP +LC VH G
Sbjct: 761 ENLSHQSVNLSQPPSEEQRRPKKKNILRRLRDAHTGRVHDNNRKPPPPPAQGRLCPVHRG 820
Query: 683 ICSIRDNFCILEGKAVERLVVCL-SHQNKKVVEASLAALCTLLGDGVEITEGVSVLYMAN 741
+CS FC+ E AVE LV L S++N +VV+A L ALCTL+ D V++ GV+VL +
Sbjct: 821 VCSPATTFCLAEAGAVEALVGVLESNENGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD 880
Query: 742 AVEPIFEILK------GNPTGTLQQRVTWAVERILR--AENIAKAASSDRGLSSALVHAF 793
A + L+ G+ G + +R WAVER L E + ++DR L SALV AF
Sbjct: 881 AARHVLRALRQHRDVGGDTAGAVSRRCFWAVERFLAHGGERCVRDVTADRALPSALVSAF 940
Query: 794 QNGDSRTRRIAEASLKHINKLPTFS 818
GD+ T+++AE+ L+ ++++P +S
Sbjct: 941 HKGDAATKQVAESVLRSLHRMPDYS 965
>Os02g0727300 U box domain containing protein
Length = 973
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 234/803 (29%), Positives = 391/803 (48%), Gaps = 40/803 (4%)
Query: 46 AFLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVV 105
A CP+T +VM DPV+ E+G +ER AI F A CPVT + +
Sbjct: 173 ALFCPLTNQVMTDPVLTESGVTYERRAIEEHFERFADSSENVICPVTKMPLQSKTLMNNA 232
Query: 106 ALRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGM 165
+L++ I EWT R E +R A L+ +++E L + + KL + + + G+
Sbjct: 233 SLKSVIAEWTMRNEAMRIRIARTALSLSSTEAMVLEAIHELKSLAKLRGKNREQMHKIGV 292
Query: 166 VPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQEREL 225
++A +L N + ++R AL+ L F ED+E +D + + I R +K + ER
Sbjct: 293 TRLLARLLDNHNVQIRHSALELLC-FLVEDEEGKDIIGKTKAIARTIKLLSTNGTDERHA 351
Query: 226 AVSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVL 285
A+S L ELSKS+++ E I G+ILIL + + S +P A++A L+NLEKC KN+
Sbjct: 352 AISFLLELSKSQLLLEDIGSTAGSILILTTMRINDSDDPIAAQKAGEVLKNLEKCSKNIK 411
Query: 286 QMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFAGVVENGTL 345
MAE+G LEPL + L+EGS E Q+ + L +++ +L + + +V +
Sbjct: 412 YMAESGYLEPLQSHLVEGSEEMQMEMVGYLAELIQEQELTIDINGSTSGVLIKMVHSCNT 471
Query: 346 PAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNLV 405
A++ A VL +S++ ++K L+E G++ + L + V P + AAAVL+N+V
Sbjct: 472 VARKAALDVLVQLSSHRPNSKTLVEAGVVPVMVEELFIRKVDDEPLSYKAMAAAVLANVV 531
Query: 406 ACGID-FGTVPLDGNRTIVSEDIVHSLLHLISNTSPP-IQCKLLEIFVMXXXXXXXXXXX 463
GID TV + S+ +++ +H++ P + ++ + +
Sbjct: 532 ESGIDPDNTVVNKEGHVLTSKYSIYNFVHMLKCFMPDELNLSIIRVLLALTAHAKALAAV 591
Query: 464 XXXXXXXXXXTNLVQFVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVRI 523
++V+ + S + AS +LL +S M H IA+ L + LVR
Sbjct: 592 VSVVRENHRGHSIVELMSSWTEALGVASTRLLITLSAHMGHTIAERLCKTQGQPRRLVRS 651
Query: 524 V--SXXXXXXXXXXXXLQILANLPKRDRRLTMELMEQGAFKYIARKVLNI----CRRGTA 577
+ + + +L+ LP R+ L + L+++GA I R + + R T+
Sbjct: 652 IFRAGRAAITERHAAAVTLLSRLPYRNVSLNLALVQEGAVPAILRGIEEMGSGAARMTTS 711
Query: 578 NNIVDNTMLEGLVKVLARITYILREEPRCVALAREYNLASLFTSLLRLNGLDG-VQLLSA 636
+ +EGLV L R+T L P + A +++ AS+ T+LL G VQ L+A
Sbjct: 712 RHAA--PYMEGLVGTLVRLTATLY-NPDVLKAAMDHDFASVLTALLAGAAGSGEVQRLAA 768
Query: 637 KALVNLSVES----------------RYMTGTPNFDE---HEQKSGLTWFGKKPPGIQLC 677
L NLS S + MT + H S K PP + +C
Sbjct: 769 VGLENLSYHSIKLSRPPPPPEDEPRPKKMTILKRLKDARVHNHSS-----SKNPP-LNVC 822
Query: 678 RVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEASLAALCTLLGDGVEITEGVSVL 737
VH G+C+ FC+LE AVE L+ CL + + +VV+A+L ALCTL+ D V++ + V L
Sbjct: 823 PVHRGVCTPATTFCLLEAGAVEGLLACLENDDARVVDAALGALCTLVDDRVDVEKAVVAL 882
Query: 738 YMANAVEPIFEILKGNPTGTLQQRVTWAVERIL-RAENI-AKAASSDRGLSSALVHAFQN 795
A + L+ + +L R VE++L +++ + + DR L +ALV AF
Sbjct: 883 AGQGAARRVLAALRQHRGNSLWHRCFSVVEKLLVHGDDVCVREVTGDRMLPTALVSAFHR 942
Query: 796 GDSRTRRIAEASLKHINKLPTFS 818
GD+ ++ AE+ L+ ++K+P +S
Sbjct: 943 GDANAKQAAESILRRLHKMPDYS 965
>Os01g0948500 Armadillo-like helical domain containing protein
Length = 672
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 169/644 (26%), Positives = 294/644 (45%), Gaps = 50/644 (7%)
Query: 182 LKALQALREFAR-EDDEYRDSVSEGDTIRRIVKFIDFEDCQERELAVSLLCELSKSEMVC 240
++ + ALR AR E ++ ++ + + IV+ + D E A++LL +LS V
Sbjct: 69 VRVMAALRRLARCVGCESKERLASIEALSSIVRSLS-RDVDETREAIALLLDLSDIPQVR 127
Query: 241 EKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVLQMAENGRLEPLLNLL 300
++I + G+I++L V + P ++AE L L +NVL MAE G PL++ L
Sbjct: 128 QRIGRIKGSIVML--VTLRNAHEPGTHDDAEKLLHMLSSNPQNVLLMAEAGYFRPLIHYL 185
Query: 301 IEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGL-LFAGVVENGTLPAKEVAFKVLDHIS 359
EGS ++ +A+++ K+ LS +K+ + + + + ++G L AK A L ++S
Sbjct: 186 KEGSDMNKILMATAISKMFLSEPMKSSLGEDGAVEPLVEMFKSGNLEAKHSALGALLNLS 245
Query: 360 TNTESAKVLIEDGILLPLFRVL-SVDGVKFLPPRLQEAAAAVLSNLVACGIDFGTVPLDG 418
++ ++A++LI GI PL ++L SV V L+E A+A+L+ +
Sbjct: 246 SSLQNAEILINSGITGPLLQLLFSVTSVLM---TLREPASAILAAIA-----------QS 291
Query: 419 NRTIVSEDIVHSLLHLISNTSPPIQCKLLEIFVMXXXXXXXXXXXXXXXXXXXXXTNLVQ 478
R ++ +D+ +L L++ +SP IQ LL L+
Sbjct: 292 ERILLHKDVAPQMLSLLNLSSPVIQLHLLRALNSISGHTNAKRARAKIRQNGGVQL-LLP 350
Query: 479 FVESDHQESRAASIKLLCKISFDMDHEIAQVLRSSPTLLGCLVRIVSXXXXXXXXXXXXL 538
F+ + + + A++ + +S D E+A+ +R T L V+I+S +
Sbjct: 351 FLTEKNIDIKIAALNFISNLSKDASQELAEQIRD--THLNIFVKIIS-SPTSGNEKAAAI 407
Query: 539 QILANLPKRDRRLTMELMEQGAFKYIARKV-LNICRRGTANNIVDNTMLEGLVKVLARIT 597
IL+NLP D+++T L E + + +NI T + ++LEG+ VL R T
Sbjct: 408 GILSNLPVTDKKITELLTEANLLPLLISLLEINITAPLTP---LRTSLLEGIAGVLIRFT 464
Query: 598 YILREEPRCVALAREYNLASLFTSLLRLNGLDGVQLLSAKALVNLSVESRYMTGTPNFDE 657
+ + + +LA + + LL G + +A +L LS S +
Sbjct: 465 --VPWDKKLQSLAVGHGVVPCLVKLLS-EGSIKAKSKAATSLAQLSQNSLAL-------- 513
Query: 658 HEQKSGLT-WFGKKPPGIQLCRVHSGICSIRDNFCILEGKAVERLVVCLSHQNKKVVEAS 716
+K+ L W P C VH+ C+++ FC+++ AV L+ L N++ A
Sbjct: 514 --RKTKLPRWLCVAPSAETYCLVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAV 571
Query: 717 LAALCTLLGDGVEITE-GVSVLYMANAVEPIFEILK-GNPTGTLQQRVTWAVERILRAEN 774
L AL TL+ D EI E G V+ A+ V + I + GN T Q++ W +ERI R E
Sbjct: 572 LEALATLMQD--EIWENGSKVIEKASGVHALLRIAEAGNSTS--QEKAIWMLERIFRLE- 626
Query: 775 IAKAASSDRGLSSALVHAFQNGDSRTRRIAEASLKHINKLPTFS 818
A + L+ Q GD + + L H+ L T S
Sbjct: 627 -AHRERYGEIAQALLIDLAQKGDPILKPMIGKILAHLELLQTQS 669
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 38/360 (10%)
Query: 47 FLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVA 106
FLCPIT+ +MRDPV+V TG +ER +I +W CP T + + + P A
Sbjct: 273 FLCPITLAIMRDPVIVATGQTYERRSIQKWLD-----SGERTCPKTRQRLSHMSLAPNYA 327
Query: 107 LRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGMV 166
L+ I EW + + +R + A + E RG + +
Sbjct: 328 LKNLILEWCDKNKVELQKREPEPV--AEQDDEHQRGAED--------------------I 365
Query: 167 PMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQERELA 226
P + + + V+ KA++ +R ++E E R +++ I ++ + D + +E
Sbjct: 366 PSLVEGMSSIHLDVQRKAVKRIRMLSKECPENRTLIADSGGIPALIGLLACPDKKVQENT 425
Query: 227 VSLLCELSKSEMVCEKISELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKNVLQ 286
V+ L LS E I++ GA+ ++ + ++ + E + TL +L ++N L
Sbjct: 426 VTSLLNLSIDESNKRHITK-GGALPLI--IEILRNGSAEAQENSAATLFSLSMIDENKLT 482
Query: 287 MAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLLFA--GVVENGT 344
+ G + PL+ LL GS + A+++ +VL N + A + G++ A ++++
Sbjct: 483 IGRLGGIAPLVELLQNGSIRGKKDAATAIFNLVL-NQQNKVRATQAGIVPALLKIIDDKA 541
Query: 345 LPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVLSNL 404
L + A + +S+N + + L R++ DG P+ +E A +VL L
Sbjct: 542 LNMVDEALSIFLLLSSNAACCGEIGTTPFIEKLVRLIK-DGT----PKNKECALSVLLEL 596
>Os02g0732200 U box domain containing protein
Length = 637
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 161/375 (42%), Gaps = 58/375 (15%)
Query: 47 FLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVA 106
F CPI++E+MRDPV+V TG +ER I RW +C + CP T + + P
Sbjct: 266 FRCPISLELMRDPVIVSTGQTYERAFIQRWI-DCGNRT----CPKTQLKLQNITLTPNYV 320
Query: 107 LRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMR----GWKLARVGKRVVRR 162
LR+ I +W +G++ R G L G+RV
Sbjct: 321 LRSLILQWCEE-----------------------KGIEPPTRSKNDGAYLEVGGERVA-- 355
Query: 163 DGMVPMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQE 222
+ + L + S R A +R A++ + R ++E I +VK + +D +
Sbjct: 356 ---IETLVRNLSSSSLDERKSAAAEIRSLAKKSTDNRILLAESGAISALVKLLSSKDLKT 412
Query: 223 RELAVSLLCELSKSEMVCEKISELNGAIL----ILGKVACSKSQNPALAEEAEMTLENLE 278
+E AV+ L LS + E I + GAI+ +L K +N A A + +L
Sbjct: 413 QEHAVTALLNLSIYDQNKELIV-VAGAIVPIIQVLRKGGMEARENAAAA------IFSLS 465
Query: 279 KCEKNVLQMAEN-GRLEPLLNLLIEGSPEKQLRIASSLEKIVL--SNDLKNLVAQRVGLL 335
+ N + + G +E L+ LL GSP + A++L + + +N ++ + A + L
Sbjct: 466 LIDDNKITIGSTPGAIEALVELLQSGSPRGRKDAATALFNLCIYQANKVRAVRAGILAPL 525
Query: 336 FAGVVENGTLPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQE 395
+ ++ A + A +L + ++ E K+ I +P +D ++ R +E
Sbjct: 526 IQMLQDSSRNGAIDEALTILSVLVSHHE-CKIAIAKAHAIPFL----IDLLRSSQARNKE 580
Query: 396 AAAAVLSNLVACGID 410
AAA+L L C D
Sbjct: 581 NAAAIL--LALCKKD 593
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 147/363 (40%), Gaps = 44/363 (12%)
Query: 47 FLCPITMEVMRDPVVVETGHAFEREAIARWFSECASLGAAPRCPVTMEVVDGADVKPVVA 106
F CPI++++M+DPV+V TG +ER I RW CP T + + + P
Sbjct: 298 FRCPISLDLMKDPVIVATGQTYERGCIERWLE-----AGHDTCPKTQQKLPNKSLTPNYV 352
Query: 107 LRAAIEEWTSRRETAALRRACRWLTKAASEKEALRGLDAVMRGWKLARVGKRVVRRDGMV 166
LR+ I +W +RA + AS A +V
Sbjct: 353 LRSLIAQWCEANGMEPPKRAAQHHNAPASCTAA---------------------EHSNVV 391
Query: 167 PMVAAMLRNGSARVRLKALQALREFAREDDEYRDSVSEGDTIRRIVKFIDFEDCQERELA 226
++ +L R +A LR+ A+ E R + + I +V + D +E
Sbjct: 392 ELLQKLLSQNLEDQR-EAAGMLRQLAKRSPENRACIGDAGAIPILVSLLSITDVSTQEHV 450
Query: 227 VSLLCELSKSEMVCEKI---SELNGAILILGKVACSKSQNPALAEEAEMTLENLEKCEKN 283
V+ L LS E +I + G + +L + + +N A TL +L ++N
Sbjct: 451 VTALLNLSIYEENKARIITSGAVPGVVHVLKRGSMEARENSA------ATLFSLSLVDEN 504
Query: 284 VLQMAENGRLEPLLNLLIEGSPEKQLRIASSLEKIVLSNDLKNLVAQRVGLL--FAGVVE 341
+ + +G + L+ LL GS + A++L + + K A R GL+ G+V
Sbjct: 505 KITIGASGAIPALVLLLSNGSQRGKRDAATALFNLCIYQGNKG-KAVRAGLIPVLLGLVT 563
Query: 342 NGTLPAKEVAFKVLDHISTNTESAKVLIEDGILLPLFRVLSVDGVKFLPPRLQEAAAAVL 401
+ A +L +S++ E K I +P+ V ++ R +E AAAVL
Sbjct: 564 ETESGMMDEALAILAILSSHPE-GKTAISSANAIPML----VGVIRNGSARNKENAAAVL 618
Query: 402 SNL 404
+L
Sbjct: 619 VHL 621
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,458,842
Number of extensions: 915415
Number of successful extensions: 2705
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 2695
Number of HSP's successfully gapped: 15
Length of query: 843
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 734
Effective length of database: 11,344,475
Effective search space: 8326844650
Effective search space used: 8326844650
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 160 (66.2 bits)