BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0265100 Os12g0265100|AK065317
(314 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0265100 Similar to Pinoresinol-lariciresinol reductase... 615 e-176
Os12g0263200 NmrA-like family protein 323 9e-89
Os01g0106300 Similar to Isoflavone reductase homolog IRL (E... 238 6e-63
Os06g0472200 Similar to Isoflavone reductase homolog Bet v ... 236 2e-62
Os02g0705000 NmrA-like family protein 209 3e-54
Os01g0106400 Similar to Isoflavone reductase homolog IRL (E... 207 1e-53
Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.... 167 1e-41
Os12g0263500 NmrA-like family protein 127 8e-30
Os06g0479400 Similar to Phenylcoumaran benzylic ether reduc... 127 8e-30
Os01g0237366 NmrA-like family protein 80 2e-15
Os01g0237333 72 8e-13
>Os12g0265100 Similar to Pinoresinol-lariciresinol reductase TH2
Length = 314
Score = 615 bits (1586), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/314 (94%), Positives = 298/314 (94%)
Query: 1 MAMEKSXXXXXXXXXXXXXXXXAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARL 60
MAMEKS AASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARL
Sbjct: 1 MAMEKSRVLVVGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARL 60
Query: 61 LEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFG 120
LEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFG
Sbjct: 61 LEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFG 120
Query: 121 MDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPK 180
MDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPK
Sbjct: 121 MDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPK 180
Query: 181 ERVGVYGDGNVKVFFVDENDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETL 240
ERVGVYGDGNVKVFFVDENDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETL
Sbjct: 181 ERVGVYGDGNVKVFFVDENDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETL 240
Query: 241 TGKSLEKFHIPGDEFLASMKDLDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPE 300
TGKSLEKFHIPGDEFLASMKDLDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPE
Sbjct: 241 TGKSLEKFHIPGDEFLASMKDLDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPE 300
Query: 301 VQYTRMDEYLKRYI 314
VQYTRMDEYLKRYI
Sbjct: 301 VQYTRMDEYLKRYI 314
>Os12g0263200 NmrA-like family protein
Length = 211
Score = 323 bits (828), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 158/192 (82%), Positives = 167/192 (86%)
Query: 1 MAMEKSXXXXXXXXXXXXXXXXAASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARL 60
MAMEKS AASLA GHPT+VLLRPEIGLDIDKLQ+LLAFKA+GARL
Sbjct: 1 MAMEKSRVLIVGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQILLAFKAQGARL 60
Query: 61 LEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFG 120
LEASLDDHDGLVAAVRQ DVVVSAMSGVH RSHNLMLQLKLVEAIK+AGNVKRFLPSEFG
Sbjct: 61 LEASLDDHDGLVAAVRQVDVVVSAMSGVHLRSHNLMLQLKLVEAIKEAGNVKRFLPSEFG 120
Query: 121 MDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPK 180
MDPSRMG+ALEPGRV+FDEKM IRRAIEDA IPHTYVS+NCFAAYFCPNL Q+ + LPPK
Sbjct: 121 MDPSRMGNALEPGRVTFDEKMEIRRAIEDAKIPHTYVSSNCFAAYFCPNLSQLTSFLPPK 180
Query: 181 ERVGVYGDGNVK 192
ERV VYGDGNVK
Sbjct: 181 ERVNVYGDGNVK 192
>Os01g0106300 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 318
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 178/291 (61%), Gaps = 8/291 (2%)
Query: 23 AASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDGLVAAVRQADVVV 82
AAS GHPT L+R D K Q+L F+ G LL L DH L+ AVR ADVV+
Sbjct: 29 AASARLGHPTTALVRDLAPSDPAKAQLLHTFRDAGVTLLHGDLHDHASLLRAVRDADVVI 88
Query: 83 SAMSGVHFRSHNLMLQLKLVEAIKDAGN--VKRFLPSEFGMDPSRMGDA-LEPGRVSFDE 139
SA+ R+ + Q +L++AIK+AG V+RF+PSEFGMDP R A +EP R +
Sbjct: 89 SAV-----RATQVPDQTRLIDAIKEAGGGRVRRFIPSEFGMDPGRGASAAVEPVRSMYGS 143
Query: 140 KMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDEN 199
K+ IRRA+E A IPHTYV+ N FA + P++ Q P + V + G+G+ KV FV+E
Sbjct: 144 KVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMPKAAPVDSVVILGEGHTKVVFVEEG 203
Query: 200 DVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLASM 259
D+GTY + + DPR NKT++IRP N ++ +EL+S WE TGK LE+ ++P D L +
Sbjct: 204 DIGTYTVLAAVDPRAENKTLHIRPPANTMSHDELVSMWEKKTGKKLERVYVPEDAVLTKI 263
Query: 260 KDLDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPEVQYTRMDEYL 310
K+L++ V + + + G +++ EATQLYPE+QYT +DEYL
Sbjct: 264 KELEYPKNVLVSIAHAAYCRGEMSSPLDDPQDVEATQLYPEIQYTTVDEYL 314
>Os06g0472200 Similar to Isoflavone reductase homolog Bet v 6.0101 (Fragment)
Length = 312
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/293 (44%), Positives = 179/293 (61%), Gaps = 7/293 (2%)
Query: 23 AASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDGLVAAVRQADVVV 82
AAS H T VL+R D K +L F+ GA L++ L H LVAA++ ADVV+
Sbjct: 26 AASAREDHLTSVLVRDPAPADPAKAAVLQGFRDSGATLVKGDLYGHQSLVAAIKSADVVI 85
Query: 83 SAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFGMDPSRMGDALEPGRVSFDEKMV 142
SA+ L Q +++ AIK+AGNVKRF PSE+G D + A+EP + + K
Sbjct: 86 SAVGYAQ-----LADQTRIISAIKEAGNVKRFFPSEYGNDVDHV-HAVEPVKSVYATKAR 139
Query: 143 IRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDENDVG 202
IRR IE IP+TYVS+N FA F P+L Q P ++V + GDGNVK F E DVG
Sbjct: 140 IRRVIEAEGIPYTYVSSNFFAGRFLPSLAQAWIKGLPTDKVIILGDGNVKGVFATEEDVG 199
Query: 203 TYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLASMKDL 262
TY IK++DDPRTLNK +Y+RP N L+ NEL+S WE GK+ ++ +IP DE L +++
Sbjct: 200 TYTIKAVDDPRTLNKILYLRPSSNILSHNELVSLWEKKVGKTFDRVYIPEDEVLKKIQES 259
Query: 263 DFASQVGIGHYYHIFYEGCLANFEIGDN-GAEATQLYPEVQYTRMDEYLKRYI 314
V + + ++ +G NFEI + G EAT+LYP+V+YT +DEYL R++
Sbjct: 260 PAPLNVVLSINHSVWVKGDHTNFEIEPSFGVEATELYPDVKYTTVDEYLNRFL 312
>Os02g0705000 NmrA-like family protein
Length = 306
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 173/292 (59%), Gaps = 12/292 (4%)
Query: 24 ASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDGLVAAVRQADVVVS 83
ASLAAGHPT+ L+RP L + L + GA +++ SL+D+ L+ AVRQ DVV+
Sbjct: 26 ASLAAGHPTFALVRPH-HLAVPDSAPLTSLA--GATVVKGSLEDYPSLLEAVRQVDVVIC 82
Query: 84 AMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFGMDPSRMGDA-LEPGRVSFDEKMV 142
A+ + + Q L+ AIKDAG VKRF+P+E+G+DP+++ ++ G +++K+
Sbjct: 83 AVP-----TKQALEQKLLIRAIKDAGCVKRFIPAEYGLDPTKVQICGMDHG--FYEKKIE 135
Query: 143 IRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDENDVG 202
IR IE IPHTY+ N Y P+L Q PP++ V ++GDGN + FV+E DV
Sbjct: 136 IRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRDEVKIFGDGNTRGVFVEETDVA 195
Query: 203 TYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLASMKDL 262
+ I +IDDPRTLN T+Y+RP N + N+L+ WE K L K +I ++ L +++D
Sbjct: 196 KFTICTIDDPRTLNNTLYLRPSGNVYSMNKLVDLWEKKINKFLNKIYITEEQLLKNIEDA 255
Query: 263 DFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPEVQYTRMDEYLKRYI 314
++ + Y F +G FEI D+ E TQLYP V YT +D YL + +
Sbjct: 256 PLPLKMDLIFIYSTFIKGDQTYFEI-DSRKEGTQLYPHVNYTTVDGYLDKLV 306
>Os01g0106400 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 314
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 167/293 (56%), Gaps = 8/293 (2%)
Query: 24 ASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDGLVAAVRQADVVVS 83
AS GHPT L+R D K Q+L +F+ G LL L DH L++AVR ADVV+S
Sbjct: 28 ASARLGHPTTALVRDLSPSDPAKSQLLQSFRDAGVTLLHGDLYDHASLLSAVRDADVVIS 87
Query: 84 AMSGVHFRSHNLMLQLKLVEAIKDAG--NVKRFLPSEFGMDPSRMGDALEPGRVSFDEKM 141
+ + Q KL+ AIK+ G NV+RFLPSEFG+DP G A+EP R F K
Sbjct: 88 TLGALQIAD-----QTKLIAAIKEGGGGNVRRFLPSEFGLDPDHTG-AVEPARSIFTGKA 141
Query: 142 VIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDENDV 201
+RRA+E A +P+TYV +N FA Y P + Q P + V + GDG KV FV+E D+
Sbjct: 142 AVRRAVEAAGVPYTYVVSNYFAGYALPTIGQNLPPARPVDSVVILGDGATKVVFVEEGDI 201
Query: 202 GTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLASMKD 261
GTY + + DPR NKT+ IRP N ++ EL++ WE TGK LE+ ++P D L +++
Sbjct: 202 GTYTVLAAVDPRAENKTVNIRPAKNAVSHEELVALWEKKTGKKLERVYVPEDAVLKQIQE 261
Query: 262 LDFASQVGIGHYYHIFYEGCLANFEIGDNGAEATQLYPEVQYTRMDEYLKRYI 314
+ + + + + G EATQL+P+VQYT +D+YL R +
Sbjct: 262 SEIPLNIVLSIAHAGYIRGETTTPLDPATAVEATQLFPDVQYTTVDDYLNRLL 314
>Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.17.1.3)
(Leucocyanidin reductase)
Length = 358
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 162/297 (54%), Gaps = 13/297 (4%)
Query: 24 ASLAAGHPTYVLLRPEIGLDIDKLQMLLAFKARGARLLEASLDDHDG---LVAAVRQ--A 78
A L +G T++L+RP + + A + +GA ++E + +G + AA+R
Sbjct: 38 ACLDSGRDTFILVRPGNACPA-RAASVDALRQKGAVVIEGCVGGKEGRKSVEAALRARGV 96
Query: 79 DVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFGMDPSRMGDALEPGRVSFD 138
+VV+S M G +++ QL L+EAI+ AG VKRFLPSEFG D R + G ++
Sbjct: 97 EVVISVMGGA-----SILDQLGLIEAIRAAGTVKRFLPSEFGHDVDR-ARPVGAGLRFYE 150
Query: 139 EKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVKVFFVDE 198
EK ++RRA E + +P+T++ N A + + L PP +R +YGDG+V+ FFV
Sbjct: 151 EKRLVRRAAEASGVPYTFICCNSIAGWPYHDSTHPSELPPPLDRFQIYGDGDVRAFFVAG 210
Query: 199 NDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGDEFLAS 258
+D+G + I++ D R++NK ++ RP N L+ NE+ S WE+ G++L + + ++ +A
Sbjct: 211 SDIGKFTIRAAYDARSINKIVHFRPACNLLSTNEMASLWESKIGRTLPRVTLTEEDLIAM 270
Query: 259 MKDLDFASQVGIGHYYHIFYEGCLANFEI-GDNGAEATQLYPEVQYTRMDEYLKRYI 314
D + + IF GC +F I G E + LYP++ + +DE YI
Sbjct: 271 AADDIIPESIVASLTHDIFINGCQTHFYIDGPRDIEISSLYPDIPFRTIDECFDDYI 327
>Os12g0263500 NmrA-like family protein
Length = 104
Score = 127 bits (320), Expect = 8e-30, Method: Composition-based stats.
Identities = 56/60 (93%), Positives = 58/60 (96%)
Query: 133 GRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVK 192
GRV+FDEKM IRRAIE+ANIPHTYVSANCFAAYF PNLCQMKTLLPPKERVGVYGDGNVK
Sbjct: 5 GRVTFDEKMEIRRAIENANIPHTYVSANCFAAYFSPNLCQMKTLLPPKERVGVYGDGNVK 64
>Os06g0479400 Similar to Phenylcoumaran benzylic ether reductase homolog TH6
Length = 215
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 14/178 (7%)
Query: 23 AASLAAGHPTYVLLRPEIGLDI--------DKLQMLLAFKARGARLLEASLDDHDGLVAA 74
AAS AGHPT L+R + ++L +F+ G +L+ + DHD LV A
Sbjct: 26 AASARAGHPTSALVRATAPPPPATGGGGSSSRARLLQSFRDAGVTILQGDIGDHDLLVKA 85
Query: 75 VRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFLPSEFGMDPSRMGDALEPGR 134
VR ADVV+S + H++ Q+K++ AIK+AGN+KRF+PS+FG D +EP +
Sbjct: 86 VRAADVVISVVG-----YHDVGEQMKIIAAIKEAGNIKRFIPSDFGNDADHA-HIVEPAK 139
Query: 135 VSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKTLLPPKERVGVYGDGNVK 192
+FD + IRR +E IP+T+VS N FA Y+ P L Q P ++V + GDGN K
Sbjct: 140 ATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGASGLPADKVVILGDGNTK 197
>Os01g0237366 NmrA-like family protein
Length = 171
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 24 ASLAAGHPTYVLLR--PEIGLDID---KLQMLLAFKARGARLLEASLDDHDGLVAAVRQA 78
ASL AGHPT VL+R G D K ++ GARL+ ++DHD LVAA++ A
Sbjct: 22 ASLDAGHPTAVLVRRPATAGARADSPVKAKLTEELCDNGARLVYGDVNDHDILVAAIKNA 81
Query: 79 DVVVSAMSGVHFRSHNLML-QLKLVEAIKDAGNVKRFLPSEFGMDPSRMG 127
DVV+ A+ H H L+ Q+K++EAI+DAGNVKRF+PSE G + G
Sbjct: 82 DVVICAVG--HTTPHKLVENQIKIMEAIRDAGNVKRFVPSECGASGADAG 129
>Os01g0237333
Length = 121
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 194 FFVDENDVGTYAIKSIDDPRTLNKTIYIRPQDNCLTQNELISKWETLTGKSLEKFHIPGD 253
FVD+ D+ IK+ +DPRT++K +Y++P N + N+L+S E G+ LEK ++P +
Sbjct: 1 MFVDDKDMSAVTIKAEEDPRTVDKILYVQPPANLCSLNQLVSVLEKKIGRDLEKCYVPEE 60
Query: 254 EFLASMKDLDFASQVGIGHYYHIFYEGCLANFEIGDNGA---EATQLYPEVQYTRMDEYL 310
E ++ AS + I + L A EAT+LYP+++Y ++EY
Sbjct: 61 ELAIK---IEAASPFPLNFQLAIVHSALLPGVASCGQTAVRVEATELYPDMEYVTVEEYF 117
Query: 311 KRYI 314
I
Sbjct: 118 DSLI 121
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,907,055
Number of extensions: 400276
Number of successful extensions: 782
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 763
Number of HSP's successfully gapped: 11
Length of query: 314
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 213
Effective length of database: 11,762,187
Effective search space: 2505345831
Effective search space used: 2505345831
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)