Os12g0265100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pinoresinol-lariciresinol reductase TH2.
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Os12g0265100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pinoresinol-lariciresinol reductase TH2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.52 | 0.414 | 11.3 | -1.13 | 2.58 | 1.57 | -0.363 | -3.54 | 0.0908 | 14.8 | 26.18 | 1351 | -- | -- |
| 80.95 | 0.419 | 11.2 | -0.229 | 2.59 | 1.19 | -0.257 | -- | 0.269 | 14.8 | 25.93 | 1348 | -- | -- |
| 77.96 | 0.411 | 11.3 | -1.12 | 2.58 | 1.57 | -- | -3.51 | 0.0989 | 14.8 | 26.26 | 1350 | -- | -- |
| 81.12 | 0.419 | 11.2 | -0.214 | 2.6 | 1.22 | -- | -- | 0.287 | 14.8 | 26.15 | 1318 | -- | -- |
| 242.08 | 0.725 | 11.4 | -1.54 | -- | 3.41 | -- | -6.73 | -0.441 | -- | 23.2 | 107 | -- | -- |
| 143.9 | 0.562 | 11.2 | 0.204 | 2.43 | -- | -0.568 | -- | 0.36 | 14.9 | -- | -- | -- | -- |
| 145 | 0.564 | 11.2 | 0.19 | 2.43 | -- | -- | -- | 0.357 | 14.9 | -- | -- | -- | -- |
| 257.28 | 0.747 | 11.3 | -0.529 | -- | 3.03 | -- | -- | -0.194 | -- | 20.92 | 86 | -- | -- |
| 82.19 | 0.422 | 11.2 | -- | 2.6 | 1.18 | -- | -- | 0.318 | 14.8 | 26.3 | 1308 | -- | -- |
| 485.69 | 1.03 | 11.2 | 0.0868 | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
| 145.96 | 0.565 | 11.2 | -- | 2.42 | -- | -- | -- | 0.336 | 14.8 | -- | -- | -- | -- |
| 264.35 | 0.757 | 11.3 | -- | -- | 2.92 | -- | -- | -0.118 | -- | 21.05 | 86 | -- | -- |
| 485.89 | 1.03 | 11.2 | -- | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.02 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 17 | 77.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 18 | 77.88 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 61 | 78.27 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 171 | 78.93 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 239 | 79.56 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 310 | 80.77 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 7 |
| 347 | 81.84 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 360 | 82.28 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 361 | 82.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 366 | 82.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 383 | 82.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 19 |
| 386 | 82.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 395 | 82.69 | temperature | 30 | 1440 | < th | dose independent | sin | 17 | NA |
| 407 | 82.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 6 |
| 437 | 82.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 488 | 83.21 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 509 | 83.33 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 523 | 83.33 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 530 | 83.46 | temperature | 30 | 1440 | > th | dose independent | sin | 16 | NA |
| 538 | 83.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 558 | 83.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 564 | 83.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 571 | 83.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 608 | 83.65 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 609 | 83.66 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 649 | 83.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 683 | 83.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 684 | 83.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 686 | 83.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 688 | 83.91 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 717 | 84.01 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 783 | 84.20 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 793 | 84.23 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 5 |
| 839 | 84.50 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 844 | 84.54 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 14 |
| 845 | 84.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 847 | 84.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 855 | 84.63 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 864 | 84.69 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 868 | 84.69 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 962 | 84.74 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 980 | 84.88 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |