Os06g0479400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phenylcoumaran benzylic ether reductase homolog TH6.
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Os06g0479400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phenylcoumaran benzylic ether reductase homolog TH6.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.42 | 0.561 | 4.93 | 2.45 | 0.044 | 1.13 | -1.8 | 2.25 | 0.706 | 1.93 | 67.36 | 115 | -- | -- |
| 151.21 | 0.573 | 4.94 | 2.59 | 0.0972 | 1.17 | -0.393 | -- | 0.716 | 1.15 | 65.5 | 165 | -- | -- |
| 147.53 | 0.566 | 4.92 | 2.46 | 0.404 | 1.09 | -- | 1.14 | 0.733 | 0.321 | 73.72 | 352 | -- | -- |
| 151.13 | 0.573 | 4.94 | 2.61 | 0.448 | 1.3 | -- | -- | 0.727 | 23.4 | 64.33 | 369 | -- | -- |
| 149.11 | 0.569 | 4.93 | 2.56 | -- | 1.19 | -- | 1.03 | 0.725 | -- | 66.32 | 156 | -- | -- |
| 176.39 | 0.623 | 4.95 | 2.62 | 0.99 | -- | -0.0558 | -- | 0.64 | 3.5 | -- | -- | -- | -- |
| 176.4 | 0.622 | 4.95 | 2.62 | 0.99 | -- | -- | -- | 0.641 | 3.5 | -- | -- | -- | -- |
| 152.19 | 0.575 | 4.93 | 2.61 | -- | 1.22 | -- | -- | 0.728 | -- | 65.6 | 156 | -- | -- |
| 308.24 | 0.818 | 4.98 | -- | 0.588 | 1.51 | -- | -- | 0.587 | 23.6 | 84 | 370 | -- | -- |
| 231.23 | 0.711 | 4.95 | 2.66 | -- | -- | -- | -- | 0.667 | -- | -- | -- | -- | -- |
| 357.14 | 0.884 | 5.01 | -- | 1.04 | -- | -- | -- | 0.349 | 3.49 | -- | -- | -- | -- |
| 319.17 | 0.832 | 4.97 | -- | -- | 1.42 | -- | -- | 0.552 | -- | 81.58 | 257 | -- | -- |
| 417.93 | 0.954 | 5.01 | -- | -- | -- | -- | -- | 0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 2 | 124.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 3 | 124.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 4 | 127.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 5 | 128.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 7 | 129.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 9 | 129.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 10 | 129.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 12 | 129.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 16 | 130.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 21 | 130.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 25 | 130.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 26 | 130.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 31 | 131.09 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 47 | 132.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 48 | 132.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 50 | 132.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 61 | 133.25 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 71 | 134.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 74 | 134.26 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 87 | 134.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 10 |
| 88 | 134.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 10 |
| 105 | 135.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 111 | 135.41 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 123 | 135.67 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 124 | 135.67 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 138 | 135.72 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 168 | 135.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 169 | 135.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 1 | 14 |
| 179 | 136.02 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 305 | 136.70 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 306 | 136.72 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 309 | 136.75 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 24 | 15 |
| 311 | 136.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 392 | 137.33 | humidity | 70.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 402 | 137.39 | humidity | 70.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 411 | 137.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 8 |
| 478 | 137.79 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 485 | 137.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 526 | 138.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 583 | 138.32 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 622 | 138.51 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 13 |
| 689 | 138.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 690 | 138.74 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 4 | NA |
| 698 | 138.78 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 11 |
| 701 | 138.78 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 11 |
| 713 | 138.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 847 | 139.22 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 858 | 139.24 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 916 | 139.41 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 946 | 139.46 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 949 | 139.46 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 969 | 139.50 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 9 |
| 973 | 139.50 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 994 | 139.54 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 6 | 4 |