BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0479400 Os06g0479400|AK109944
(215 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0479400 Similar to Phenylcoumaran benzylic ether reduc... 390 e-109
Os06g0472200 Similar to Isoflavone reductase homolog Bet v ... 216 9e-57
Os01g0106400 Similar to Isoflavone reductase homolog IRL (E... 186 1e-47
Os01g0106300 Similar to Isoflavone reductase homolog IRL (E... 177 4e-45
Os12g0263200 NmrA-like family protein 150 6e-37
Os12g0265100 Similar to Pinoresinol-lariciresinol reductase... 145 2e-35
Os02g0705000 NmrA-like family protein 140 7e-34
Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.... 105 2e-23
Os01g0237366 NmrA-like family protein 97 8e-21
>Os06g0479400 Similar to Phenylcoumaran benzylic ether reductase homolog TH6
Length = 215
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/215 (90%), Positives = 195/215 (90%)
Query: 1 MEPGDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXL 60
MEPGDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALV L
Sbjct: 1 MEPGDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALVRATAPPPPATGGGGSSSRARL 60
Query: 61 LQSFRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRF 120
LQSFRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRF
Sbjct: 61 LQSFRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRF 120
Query: 121 IPSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA 180
IPSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA
Sbjct: 121 IPSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA 180
Query: 181 SGLPADKVVILGDGNTKSNICRRGGHCNVYHQRSG 215
SGLPADKVVILGDGNTKSNICRRGGHCNVYHQRSG
Sbjct: 181 SGLPADKVVILGDGNTKSNICRRGGHCNVYHQRSG 215
>Os06g0472200 Similar to Isoflavone reductase homolog Bet v 6.0101 (Fragment)
Length = 312
Score = 216 bits (550), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 137/197 (69%), Gaps = 8/197 (4%)
Query: 1 MEPGDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXL 60
M + SR+L+IGGTG++G++IVAASAR H TS LV +
Sbjct: 1 MAAAGKEPSRVLVIGGTGYIGRYIVAASAREDHLTSVLVRDPAPADPAKAA--------V 52
Query: 61 LQSFRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRF 120
LQ FRD+G T+++GD+ H LV A+++ADVVIS VGY + +Q +II+AIKEAGN+KRF
Sbjct: 53 LQGFRDSGATLVKGDLYGHQSLVAAIKSADVVISAVGYAQLADQTRIISAIKEAGNVKRF 112
Query: 121 IPSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA 180
PS++GND DH H VEP K+ + +A+IRR +EAEGIPYT+VS NFFAG +LP+L Q
Sbjct: 113 FPSEYGNDVDHVHAVEPVKSVYATKARIRRVIEAEGIPYTYVSSNFFAGRFLPSLAQAWI 172
Query: 181 SGLPADKVVILGDGNTK 197
GLP DKV+ILGDGN K
Sbjct: 173 KGLPTDKVIILGDGNVK 189
>Os01g0106400 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 314
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 133/203 (65%), Gaps = 10/203 (4%)
Query: 4 GDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQS 63
G+ KSRIL++GGTG++G+ +V ASAR GHPT+ALV LLQS
Sbjct: 5 GEEKKSRILVVGGTGYIGRHVVLASARLGHPTTALVRDLSPSDPAKSQ--------LLQS 56
Query: 64 FRDAGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAG--NIKRFI 121
FRDAGVT+L GD+ DH L+ AVR ADVVIS +G + +Q K+IAAIKE G N++RF+
Sbjct: 57 FRDAGVTLLHGDLYDHASLLSAVRDADVVISTLGALQIADQTKLIAAIKEGGGGNVRRFL 116
Query: 122 PSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGAS 181
PS+FG D DH VEPA++ F +A +RR VEA G+PYT+V N+FAGY LPT+ Q
Sbjct: 117 PSEFGLDPDHTGAVEPARSIFTGKAAVRRAVEAAGVPYTYVVSNYFAGYALPTIGQNLPP 176
Query: 182 GLPADKVVILGDGNTKSNICRRG 204
P D VVILGDG TK G
Sbjct: 177 ARPVDSVVILGDGATKVVFVEEG 199
>Os01g0106300 Similar to Isoflavone reductase homolog IRL (EC 1.3.1.-)
Length = 318
Score = 177 bits (450), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 130/202 (64%), Gaps = 12/202 (5%)
Query: 7 NKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQSFRD 66
KSRIL++GGTG++G+ +VAASAR GHPT+ALV LL +FRD
Sbjct: 10 TKSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQ--------LLHTFRD 61
Query: 67 AGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAG--NIKRFIPSD 124
AGVT+L GD+ DH L++AVR ADVVIS V V +Q ++I AIKEAG ++RFIPS+
Sbjct: 62 AGVTLLHGDLHDHASLLRAVRDADVVISAVRATQVPDQTRLIDAIKEAGGGRVRRFIPSE 121
Query: 125 FGNDADH--AHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGASG 182
FG D + VEP ++ + + IRR VEA GIP+T+V+CN+FAG+ LP++ Q
Sbjct: 122 FGMDPGRGASAAVEPVRSMYGSKVGIRRAVEAAGIPHTYVACNYFAGFALPSIGQFMPKA 181
Query: 183 LPADKVVILGDGNTKSNICRRG 204
P D VVILG+G+TK G
Sbjct: 182 APVDSVVILGEGHTKVVFVEEG 203
>Os12g0263200 NmrA-like family protein
Length = 211
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 117/197 (59%), Gaps = 14/197 (7%)
Query: 7 NKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQSFRD 66
KSR+LI+GGTG++G+ IVAAS GHPT L+ +L +F+
Sbjct: 4 EKSRVLIVGGTGYIGRRIVAASLAEGHPTFVLLRPEIGLDIDKLQ--------ILLAFKA 55
Query: 67 AGVTILQGDIGDHDLLVKAVRAADVVISVVG-----YHDVGEQMKIIAAIKEAGNIKRFI 121
G +L+ + DHD LV AVR DVV+S + H++ Q+K++ AIKEAGN+KRF+
Sbjct: 56 QGARLLEASLDDHDGLVAAVRQVDVVVSAMSGVHLRSHNLMLQLKLVEAIKEAGNVKRFL 115
Query: 122 PSDFGNDADHA-HIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA 180
PS+FG D + +EP + TFD + +IRR +E IP+T+VS N FA Y+ P L Q +
Sbjct: 116 PSEFGMDPSRMGNALEPGRVTFDEKMEIRRAIEDAKIPHTYVSSNCFAAYFCPNLSQLTS 175
Query: 181 SGLPADKVVILGDGNTK 197
P ++V + GDGN K
Sbjct: 176 FLPPKERVNVYGDGNVK 192
>Os12g0265100 Similar to Pinoresinol-lariciresinol reductase TH2
Length = 314
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 115/197 (58%), Gaps = 14/197 (7%)
Query: 7 NKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQSFRD 66
KSR+L++GGTG +G+ +VAAS AGHPT L+ +L +F+
Sbjct: 4 EKSRVLVVGGTGFVGRRVVAASLAAGHPTYVLLRPEIGLDIDKLQ--------MLLAFKA 55
Query: 67 AGVTILQGDIGDHDLLVKAVRAADVVISVVG-----YHDVGEQMKIIAAIKEAGNIKRFI 121
G +L+ + DHD LV AVR ADVV+S + H++ Q+K++ AIK+AGN+KRF+
Sbjct: 56 RGARLLEASLDDHDGLVAAVRQADVVVSAMSGVHFRSHNLMLQLKLVEAIKDAGNVKRFL 115
Query: 122 PSDFGNDADHA-HIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGA 180
PS+FG D +EP + +FD + IRR +E IP+T+VS N FA Y+ P L Q
Sbjct: 116 PSEFGMDPSRMGDALEPGRVSFDEKMVIRRAIEDANIPHTYVSANCFAAYFCPNLCQMKT 175
Query: 181 SGLPADKVVILGDGNTK 197
P ++V + GDGN K
Sbjct: 176 LLPPKERVGVYGDGNVK 192
>Os02g0705000 NmrA-like family protein
Length = 306
Score = 140 bits (353), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 11/191 (5%)
Query: 7 NKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQSFRD 66
+SR+L++G TG LG +V AS AGHPT ALV L S
Sbjct: 6 TRSRVLVVGATGRLGGCLVRASLAAGHPTFALVRPHHLAVPDSAP---------LTSL-- 54
Query: 67 AGVTILQGDIGDHDLLVKAVRAADVVISVVGYHDVGEQMKIIAAIKEAGNIKRFIPSDFG 126
AG T+++G + D+ L++AVR DVVI V EQ +I AIK+AG +KRFIP+++G
Sbjct: 55 AGATVVKGSLEDYPSLLEAVRQVDVVICAVPTKQALEQKLLIRAIKDAGCVKRFIPAEYG 114
Query: 127 NDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQPGASGLPAD 186
D I ++ + +IR +E+E IP+T++ CNF Y LP+LVQPG P D
Sbjct: 115 LDPTKVQICGMDHGFYEKKIEIRHLIESECIPHTYICCNFLMRYLLPSLVQPGLDAPPRD 174
Query: 187 KVVILGDGNTK 197
+V I GDGNT+
Sbjct: 175 EVKIFGDGNTR 185
>Os03g0259400 Similar to Leucoanthocyanidin reductase (EC 1.17.1.3)
(Leucocyanidin reductase)
Length = 358
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 3 PGDRNKSRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQ 62
P R LI+G TG++G+F+ A +G T LV +
Sbjct: 14 PQPRRTGAALIVGATGYIGRFVAEACLDSGRDTFILVRPGNACPARAAS---------VD 64
Query: 63 SFRDAGVTILQGDIGDHD---LLVKAVRA--ADVVISVVGYHDVGEQMKIIAAIKEAGNI 117
+ R G +++G +G + + A+RA +VVISV+G + +Q+ +I AI+ AG +
Sbjct: 65 ALRQKGAVVIEGCVGGKEGRKSVEAALRARGVEVVISVMGGASILDQLGLIEAIRAAGTV 124
Query: 118 KRFIPSDFGNDADHAHIVEPAKATFDVEAQIRRTVEAEGIPYTFVSCNFFAGYYLPTLVQ 177
KRF+PS+FG+D D A V ++ + +RR EA G+PYTF+ CN AG+
Sbjct: 125 KRFLPSEFGHDVDRARPVGAGLRFYEEKRLVRRAAEASGVPYTFICCNSIAGWPYHDSTH 184
Query: 178 PGASGLPADKVVILGDGNTKS 198
P P D+ I GDG+ ++
Sbjct: 185 PSELPPPLDRFQIYGDGDVRA 205
>Os01g0237366 NmrA-like family protein
Length = 171
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 9 SRILIIGGTGHLGKFIVAASARAGHPTSALVXXXXXXXXXXXXXXXXXXXXLLQSFRDAG 68
SRIL+IGGTG LG+ +V AS AGHPT+ LV L + D G
Sbjct: 4 SRILVIGGTGRLGRHLVTASLDAGHPTAVLV---RRPATAGARADSPVKAKLTEELCDNG 60
Query: 69 VTILQGDIGDHDLLVKAVRAADVVISVVGY---HDVGE-QMKIIAAIKEAGNIKRFIPSD 124
++ GD+ DHD+LV A++ ADVVI VG+ H + E Q+KI+ AI++AGN+KRF+PS+
Sbjct: 61 ARLVYGDVNDHDILVAAIKNADVVICAVGHTTPHKLVENQIKIMEAIRDAGNVKRFVPSE 120
Query: 125 FG 126
G
Sbjct: 121 CG 122
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.139 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,953,778
Number of extensions: 261140
Number of successful extensions: 628
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 611
Number of HSP's successfully gapped: 9
Length of query: 215
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 118
Effective length of database: 11,971,043
Effective search space: 1412583074
Effective search space used: 1412583074
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)