BLAST Search Results

BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0158600 Os12g0158600|J065205E01
         (161 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os12g0158600  TB2/DP1 and HVA22 related protein family protein    313   5e-86
Os11g0156600  TB2/DP1 and HVA22 related protein family protein    249   6e-67
Os04g0415200  TB2/DP1 and HVA22 related protein family protein    179   9e-46
Os10g0177400  TB2/DP1 and HVA22 related protein family protein    138   1e-33
Os03g0250200  TB2/DP1 and HVA22 related protein family protein    138   2e-33
Os03g0132300  TB2/DP1 and HVA22 related protein family protein    129   7e-31
Os09g0533800                                                      125   1e-29

>Os12g0158600 TB2/DP1 and HVA22 related protein family protein
          Length = 161

 Score =  313 bits (801), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESLISWMPMYGEIKLAFFVY 73
           FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESLISWMPMYGEIKLAFFVY
Sbjct: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESLISWMPMYGEIKLAFFVY 73

Query: 74  LWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTAFFMD 133
           LWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTAFFMD
Sbjct: 74  LWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTAFFMD 133

Query: 134 VLRYVVSDKPEGSNQEVMPFLPVNIACT 161
           VLRYVVSDKPEGSNQEVMPFLPVNIACT
Sbjct: 134 VLRYVVSDKPEGSNQEVMPFLPVNIACT 161



>Os11g0156600 TB2/DP1 and HVA22 related protein family protein
          Length = 217

 Score =  249 bits (636), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 113/133 (84%), Positives = 125/133 (93%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESLISWMPMYGEIKLAFFVY 73
           FGYAMPAFECFKT+E RP+DAHMLRFWCQYWIIV+MVIA ES +SWMPMYGEIKLAFFVY
Sbjct: 14  FGYAMPAFECFKTLETRPDDAHMLRFWCQYWIIVSMVIACESFVSWMPMYGEIKLAFFVY 73

Query: 74  LWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTAFFMD 133
           LWYPKTKGSDVVYD+F+RP VMQYEPNIEQRL HLRA SGQL++FY+KNFADKGTAFFMD
Sbjct: 74  LWYPKTKGSDVVYDSFIRPTVMQYEPNIEQRLEHLRANSGQLIAFYIKNFADKGTAFFMD 133

Query: 134 VLRYVVSDKPEGS 146
            LRYVVS++PE +
Sbjct: 134 FLRYVVSERPEAA 146



>Os04g0415200 TB2/DP1 and HVA22 related protein family protein
          Length = 192

 Score =  179 bits (453), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 102/138 (73%), Gaps = 4/138 (2%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFES----LISWMPMYGEIKLA 69
           FGYAMPA ECFK +E RP     LRFWCQYWII+ +++ F+     L S +PMY E++LA
Sbjct: 14  FGYAMPALECFKAIEQRPGRTDHLRFWCQYWIILVILVIFDDIAGVLTSKIPMYSELRLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           F VYLWYP+T+G+D+VYDTFLRP+VMQY+PNIE+RL +LRA +G +L FY+KNF D+G  
Sbjct: 74  FLVYLWYPQTRGTDIVYDTFLRPLVMQYQPNIEERLRYLRANAGDILIFYLKNFTDRGYD 133

Query: 130 FFMDVLRYVVSDKPEGSN 147
            F+  + Y+ S    GS 
Sbjct: 134 LFLRGMEYIRSQTSRGSR 151



>Os10g0177400 TB2/DP1 and HVA22 related protein family protein
          Length = 233

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 89/140 (63%), Gaps = 4/140 (2%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESL----ISWMPMYGEIKLA 69
           FGYA PA+EC+KTVE    +   L FWCQYWI+VA++   E      ISW+P+Y E KL 
Sbjct: 14  FGYAYPAYECYKTVELNKPEIEKLIFWCQYWILVALLTVLERFGDFAISWLPLYSEAKLM 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FF+YLW P+TKG+  VY+TF RP + QYE +I+  +L LR ++G +L  Y +  A  G  
Sbjct: 74  FFIYLWCPRTKGTSYVYETFFRPYISQYENDIDCSILDLRVRAGDMLVVYWQKVAIIGQT 133

Query: 130 FFMDVLRYVVSDKPEGSNQE 149
            F ++L+Y  +  P  S++ 
Sbjct: 134 TFFNILKYASAQSPAHSSRS 153



>Os03g0250200 TB2/DP1 and HVA22 related protein family protein
          Length = 250

 Score =  138 bits (347), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 4/129 (3%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESL----ISWMPMYGEIKLA 69
           FGYA PA+EC+KTVE    +   L FWCQYWI+VA++   E      ISW+P Y E KL 
Sbjct: 14  FGYAYPAYECYKTVELNKPEIEQLIFWCQYWILVALMTVMERFGDFTISWLPFYSEAKLM 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FF+YLWYPKTKG+  +Y TF RP + Q+E  I++ LL LRA++  ++  Y +  A  G  
Sbjct: 74  FFIYLWYPKTKGTTYIYGTFFRPYISQHENEIDRNLLELRARATDVVVLYFQKAATVGQN 133

Query: 130 FFMDVLRYV 138
            F DVL+YV
Sbjct: 134 TFFDVLKYV 142



>Os03g0132300 TB2/DP1 and HVA22 related protein family protein
          Length = 288

 Score =  129 bits (325), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 92/149 (61%), Gaps = 10/149 (6%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFE----SLISWMPMYGEIKLA 69
            GYA PA++C+KTVE    +   LRFWCQYWI++A++  F+    + +SW+PMY E KLA
Sbjct: 14  LGYAYPAYDCYKTVELNKPEIEKLRFWCQYWILLAVLTVFDRVGDNFVSWLPMYSEAKLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           F V+LWYPKT G+  VY++F +P + +YE +I+  LL LR ++  +   Y +  ++ G  
Sbjct: 74  FVVFLWYPKTLGTAYVYESFFKPWIAKYEADIDHNLLELRTRACDMAVLYFQKVSNYGQT 133

Query: 130 FFMDVLRYVVS------DKPEGSNQEVMP 152
              ++L+YV S       +P+   Q+  P
Sbjct: 134 RLYEILQYVASQSQTQTSRPQAREQQQRP 162



>Os09g0533800 
          Length = 188

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 86/132 (65%), Gaps = 4/132 (3%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESL----ISWMPMYGEIKLA 69
            GYA PA++C+KT+E        LRFWCQYWI++A +   E++    +SW+PMYGE KLA
Sbjct: 14  LGYAYPAYDCYKTLELNKPQIDQLRFWCQYWILLAFLTTLETITYFTVSWLPMYGEAKLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
             +YLWYPKT+G+  VY+++L+P++ ++E +I++ LL LRA +    + +++     G A
Sbjct: 74  LVLYLWYPKTRGAKHVYESYLQPVLARHEADIDRGLLQLRASAKDATASHLQAAVSLGRA 133

Query: 130 FFMDVLRYVVSD 141
            F +V   V S 
Sbjct: 134 CFAEVAGRVSSQ 145



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.329    0.141    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,797,199
Number of extensions: 173510
Number of successful extensions: 423
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 7
Length of query: 161
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 68
Effective length of database: 12,179,899
Effective search space: 828233132
Effective search space used: 828233132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 152 (63.2 bits)