BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0149300 Os12g0149300|AK110842
(463 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC... 775 0.0
Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC... 576 e-164
Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC... 425 e-119
Os03g0306100 Galactosyl transferase family protein 399 e-111
Os03g0305800 Galactosyl transferase family protein 397 e-110
Os11g0546500 Galactosyl transferase family protein 288 5e-78
Os02g0723200 Similar to Alpha galactosyltransferase (Fragment) 285 5e-77
>Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 463
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/463 (83%), Positives = 386/463 (83%)
Query: 1 MAVTGGGRPAVRQQAARGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTYXXXXXXX 60
MAVTGGGRPAVRQQAARGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTY
Sbjct: 1 MAVTGGGRPAVRQQAARGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTYGVGGGGG 60
Query: 61 XXXXXXXXXXXXXXXXXXXLREIRSXXXXXXXXXXXXPLGVDXXXXXXXXXXXXXXXXXX 120
LREIRS PLGVD
Sbjct: 61 SDAVAAAEEARVVEDIERILREIRSDTDDDDDDEEEEPLGVDASTTTTTNSTTTTATAAR 120
Query: 121 XXXXXHTYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDH 180
HTYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDH
Sbjct: 121 RRSSNHTYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDH 180
Query: 181 YLLKATKNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSD 240
YLLKATKNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSD
Sbjct: 181 YLLKATKNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSD 240
Query: 241 ALFTDMAFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAP 300
ALFTDMAFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAP
Sbjct: 241 ALFTDMAFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAP 300
Query: 301 MGPKGRVRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFW 360
MGPKGRVRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFW
Sbjct: 301 MGPKGRVRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFW 360
Query: 361 AGLVDKYEEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQ 420
AGLVDKYEEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQ
Sbjct: 361 AGLVDKYEEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQ 420
Query: 421 VLRLYGFXXXXXXXXXXXXXXXXTDNPLVNKEAALKMDAKIES 463
VLRLYGF TDNPLVNKEAALKMDAKIES
Sbjct: 421 VLRLYGFRHRSLASARVRRVANRTDNPLVNKEAALKMDAKIES 463
>Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 480
Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/447 (63%), Positives = 322/447 (72%), Gaps = 10/447 (2%)
Query: 17 RGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTYXXXXXXXXXXXXXXXXXXXXXXX 76
R +++ RTFNNVKIT++CG +T+LVLRGT+G+NL
Sbjct: 42 RSRKIHRTFNNVKITVLCGLVTILVLRGTIGLNL-----SLPNQPTDADALAGAKAVEDI 96
Query: 77 XXXLREIRSXXXXXXXXXXXXPLGVDXXXXXXXXXXXXXXXXXXXXXXXHTYTLGPKVTR 136
LREIRS D Y LGPK++
Sbjct: 97 DRILREIRSDGGADDDAAAA----GDLAGSFNATALNATEAAAAYASAVERYALGPKISD 152
Query: 137 WNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATKNKIDYCRIH 196
W+ +RR+WL +NPGFPS A GKPRILLVTGSQP PCD+ GDHYLLK TKNKIDYCR+H
Sbjct: 153 WDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTKNKIDYCRLH 212
Query: 197 GIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMAFELPLARYD 256
GIEIVH++AHLD ELAGYWAKLPLLRRLMLSHPEVEW+WWMDSDALFTDMAFELPL+RY
Sbjct: 213 GIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMAFELPLSRYQ 272
Query: 257 TSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRVRDEAGKVLT 316
NL+IHGY +LLF K SWIALNTGSFL RNCQWSL+LLDAWAPMGPKG +RDEAGK+LT
Sbjct: 273 DRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFIRDEAGKILT 332
Query: 317 ASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERHHP 376
A+L GRPAFEADDQSALI++LL+QKE+WM KV++E+ Y+LHGFWAGLVDKYEEMME HHP
Sbjct: 333 ANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKYEEMMENHHP 392
Query: 377 GLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGFXXXXXXXXX 436
GLGDERWPFVTHFVGCKPCG YGDYP ERCL MERAFNFADNQVLRLYGF
Sbjct: 393 GLGDERWPFVTHFVGCKPCGSYGDYPVERCLRSMERAFNFADNQVLRLYGFAHKGLESPK 452
Query: 437 XXXXXXXTDNPLVNKEAALKMDAKIES 463
T P+ +KE L + AKI +
Sbjct: 453 IKRVRNQTTKPIDDKE-NLDVKAKIST 478
>Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 348
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 252/325 (77%)
Query: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATK 187
YTLGPK++ W+ +R W R+P P KPR+LLVTGS P PC++ GDHYLLK+ K
Sbjct: 7 YTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSIK 66
Query: 188 NKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMA 247
NK+DYCR+HG+EI ++MA LD E+AG+WAKLPLLR L+L+HPE+E++WWMDSDA+F+DMA
Sbjct: 67 NKMDYCRVHGLEIFYNMALLDAEMAGFWAKLPLLRALLLAHPEIEFLWWMDSDAMFSDMA 126
Query: 248 FELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRV 307
FELP RY NL++HG+ E+++ ++WI LNTGSFLLRNCQWSL+ LD WAPMGPKG V
Sbjct: 127 FELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGPV 186
Query: 308 RDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKY 367
R EAGKVLT L RP FEADDQSA+++IL T++E+W +KVY+E+ Y+LHG+W LVD+Y
Sbjct: 187 RIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDRY 246
Query: 368 EEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGF 427
EEM+E +HPGLGD RWP VTHFVGCKPCG +GDYP ERCL MERAFNF DNQ+L++YGF
Sbjct: 247 EEMLENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMERAFNFGDNQILQMYGF 306
Query: 428 XXXXXXXXXXXXXXXXTDNPLVNKE 452
T NPL K+
Sbjct: 307 THKSLGSRKVKRIRNETSNPLDVKD 331
>Os03g0306100 Galactosyl transferase family protein
Length = 449
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 187/323 (57%), Positives = 240/323 (74%), Gaps = 5/323 (1%)
Query: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDA-RGKPRILLVTGSQPAPCDDAAGDHYLLKAT 186
Y+LG + ++A+R WL+ +P FP+R A G+PR+L+VTGS PA C D GDH LL+A
Sbjct: 109 YSLGRTILGYDARRSAWLAAHPEFPARVAPAGRPRVLVVTGSAPARCPDPDGDHLLLRAF 168
Query: 187 KNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDM 246
KNK+DYCRIHG+++ ++ A LD E++G+WAKLPLLR LM++HPE E +WW+DSDA+FTDM
Sbjct: 169 KNKVDYCRIHGLDVFYNTAFLDAEMSGFWAKLPLLRMLMVAHPEAELIWWVDSDAVFTDM 228
Query: 247 AFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGR 306
FE+P RY NLV+HG+ +F ++SWI +NTGSFL+RNCQWSL+LLDAWAPMGP+G
Sbjct: 229 LFEIPWERYAVHNLVLHGWEAKVFDEKSWIGVNTGSFLIRNCQWSLDLLDAWAPMGPRGP 288
Query: 307 VRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDK 366
VRD G++ L+GRP FEADDQSALI++L+TQ++RW +KV++E Y L+GFW G+VDK
Sbjct: 289 VRDRYGELFAEELSGRPPFEADDQSALIYLLVTQRQRWGDKVFIESSYDLNGFWEGIVDK 348
Query: 367 YEEMMERHHPGLGDERWPFVTHFVGCKPCGGYGD-YPRERCLGGMERAFNFADNQVLRLY 425
YEE+ G D RWPFVTHFVGCKPC Y D YP ERC GMERAFNFAD+Q+L+LY
Sbjct: 349 YEEL---RRAGRDDGRWPFVTHFVGCKPCRRYADSYPAERCRRGMERAFNFADDQILKLY 405
Query: 426 GFXXXXXXXXXXXXXXXXTDNPL 448
GF T PL
Sbjct: 406 GFAHESLNTTAVRRVRNETGEPL 428
>Os03g0305800 Galactosyl transferase family protein
Length = 483
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 181/302 (59%), Positives = 229/302 (75%), Gaps = 2/302 (0%)
Query: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATK 187
YTLGP VT ++A+R +WL + FP+ RG+PR+L+VTGS P C D GDH LL+A K
Sbjct: 132 YTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALK 191
Query: 188 NKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMA 247
NK+DYCR+HG +I +S LD E++G+W KLPLLR LML+HPE E +WW+DSD +FTDM
Sbjct: 192 NKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDML 251
Query: 248 FELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRV 307
FE P RY NLVIHG+ ++ ++W+ LN GSF++RNCQWSL+LLDAWAPMGP G V
Sbjct: 252 FEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPV 311
Query: 308 RDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKY 367
RD GK+ +LT RP +EADDQSAL+ +L+TQ+ RW KV++E+ Y LHGFWA +VD+Y
Sbjct: 312 RDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDRY 371
Query: 368 EEMMER-HHPGLGDERWPFVTHFVGCKPCGG-YGDYPRERCLGGMERAFNFADNQVLRLY 425
EEM + HPGLGD+RWP +THFVGCKPCGG Y ERC GM+RAFNFAD+Q+L LY
Sbjct: 372 EEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILELY 431
Query: 426 GF 427
GF
Sbjct: 432 GF 433
>Os11g0546500 Galactosyl transferase family protein
Length = 483
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 202/339 (59%), Gaps = 45/339 (13%)
Query: 134 VTRWNAKRRQWLS-RNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATKNKIDY 192
+T W+A+R W+ R P + A G+ R+++V+GSQ PC GDH L + KNK+DY
Sbjct: 124 ITGWDARRAAWMRLRYPRGLNATAAGRERVVMVSGSQAPPCRGEGGDHLLFRFLKNKVDY 183
Query: 193 CRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMAFELPL 252
CR+HG+E++++ A L + YWAK+P +R ML+HP+ EWVWW+D+DA+FTDM F LPL
Sbjct: 184 CRLHGVELLYNNALLQPRMLAYWAKIPAVRAAMLAHPDAEWVWWVDADAVFTDMDFSLPL 243
Query: 253 ARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRVRDEAG 312
+Y NLV++G+ + ++ +RSW+ LN G FL+RNCQWSL+ +DAWA MGP G
Sbjct: 244 HKYKDHNLVVYGWNKEVYGERSWVGLNAGVFLIRNCQWSLDFMDAWARMGPASPEYARWG 303
Query: 313 KVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEM-- 370
VL +L G+ E+DDQSAL+++L +E+W K Y+E YF G+W +VD+ +++
Sbjct: 304 SVLHDTLRGKSDKESDDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDIAA 363
Query: 371 ---------------MERHHPGLGDERW-------------------------PFVTHFV 390
+ R H ER+ PFVTHF
Sbjct: 364 RYEAAERRPSAAAAHLRRRHAEREHERYAAARNAAVRGAVPGPAGGGQSGWRRPFVTHFT 423
Query: 391 GCKPCGGYGD--YPRERCLGGMERAFNFADNQVLRLYGF 427
GC+PCGG + Y ++ C GM RA NFAD+QVLR YG+
Sbjct: 424 GCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGY 462
>Os02g0723200 Similar to Alpha galactosyltransferase (Fragment)
Length = 447
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 199/339 (58%), Gaps = 41/339 (12%)
Query: 127 TYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKAT 186
YT+ + W+ KR +WL +P G R+L+V+GSQP PC AGD L +
Sbjct: 90 AYTIDRPIVGWDEKRAEWLRAHPELA---GGGGERVLMVSGSQPEPCGSPAGDSLLTRLL 146
Query: 187 KNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDM 246
KNK+DYCR++G++++++ A L + YWAK+P++R M++HPE EWVWW+DSDA+ TDM
Sbjct: 147 KNKLDYCRLNGVQLLYNTALLRPSMDRYWAKIPVVRAAMVAHPEAEWVWWVDSDAVLTDM 206
Query: 247 AFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGR 306
F LPL+RY N V HG+P L++ RSW +LN G FL+RNCQWSL+ +DAWA MGP
Sbjct: 207 DFRLPLSRYRDHNFVAHGWPHLVYESRSWTSLNAGVFLIRNCQWSLDFMDAWAAMGPDSP 266
Query: 307 VRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFW------ 360
G VLT++ + E+DDQSAL+++LL W +KVY+E Y+ G+W
Sbjct: 267 EYQHWGAVLTSTFKDKVFNESDDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGR 326
Query: 361 -AGLVDKYEEM------MERHH-----------------------PGLGDERWPFVTHFV 390
+ ++YE M + R H G+ R PFVTHF
Sbjct: 327 LGNITERYEAMERGAAPLRRRHAEAEHASYAAARDAALAGAGLAESGVSGWRRPFVTHFT 386
Query: 391 GCKPCGGYGD--YPRERCLGGMERAFNFADNQVLRLYGF 427
GC+PC G+ + Y + C G+ RA +FAD+QVLR YGF
Sbjct: 387 GCQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGF 425
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,456,441
Number of extensions: 605568
Number of successful extensions: 1012
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 997
Number of HSP's successfully gapped: 7
Length of query: 463
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 359
Effective length of database: 11,605,545
Effective search space: 4166390655
Effective search space used: 4166390655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 158 (65.5 bits)