Os03g0305800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactosyl transferase family protein.
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Os03g0305800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactosyl transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.73 | 0.378 | 10.4 | 0.306 | 0.986 | -0.631 | 0.679 | 0.0807 | 0.486 | 5.07 | 21.56 | 114 | -- | -- |
| 64.71 | 0.375 | 10.4 | 0.303 | 0.986 | -0.633 | 0.658 | -- | 0.486 | 5.08 | 21.72 | 114 | -- | -- |
| 65.83 | 0.378 | 10.4 | 0.302 | 0.996 | -0.649 | -- | -0.00457 | 0.486 | 5.07 | 21.72 | 114 | -- | -- |
| 65.81 | 0.378 | 10.4 | 0.306 | 0.987 | -0.644 | -- | -- | 0.483 | 5.12 | 21.72 | 114 | -- | -- |
| 84.67 | 0.429 | 10.4 | 0.407 | -- | -1.21 | -- | -0.201 | 0.616 | -- | 10.01 | 418 | -- | -- |
| 75.86 | 0.408 | 10.4 | 0.25 | 1.25 | -- | 0.707 | -- | 0.43 | 3.99 | -- | -- | -- | -- |
| 77.3 | 0.412 | 10.4 | 0.241 | 1.25 | -- | -- | -- | 0.426 | 4 | -- | -- | -- | -- |
| 76.16 | 0.406 | 10.4 | 0.346 | -- | -1.29 | -- | -- | 0.547 | -- | 2.03 | 512 | -- | -- |
| 68.2 | 0.385 | 10.4 | -- | 0.995 | -0.627 | -- | -- | 0.447 | 5.05 | 21.88 | 119 | -- | -- |
| 163.09 | 0.597 | 10.4 | 0.292 | -- | -- | -- | -- | 0.459 | -- | -- | -- | -- | -- |
| 78.83 | 0.415 | 10.4 | -- | 1.26 | -- | -- | -- | 0.399 | 4 | -- | -- | -- | -- |
| 78.21 | 0.412 | 10.4 | -- | -- | -1.27 | -- | -- | 0.465 | -- | 2.03 | 510 | -- | -- |
| 165.34 | 0.6 | 10.5 | -- | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.71 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 16 |
| 2 | 60.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 8 | 61.55 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 18 | 61.81 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 38 | 62.39 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 54 | 62.74 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 71 | 62.90 | wind | 7.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 98 | 63.14 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 114 | 63.28 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 117 | 63.31 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 124 | 63.38 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 125 | 63.38 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 126 | 63.39 | wind | 9.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 132 | 63.44 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 135 | 63.46 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 141 | 63.51 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 155 | 63.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 167 | 63.70 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 8 |
| 168 | 63.70 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 174 | 63.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 199 | 63.80 | temperature | 15.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 208 | 63.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 210 | 63.84 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 20 |
| 220 | 63.88 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 221 | 63.88 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 224 | 63.88 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 225 | 63.88 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 230 | 63.88 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 232 | 63.88 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 234 | 63.88 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 244 | 63.91 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 11 |
| 253 | 63.95 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 256 | 63.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 257 | 63.96 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 259 | 63.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 274 | 64.03 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 18 |
| 277 | 64.04 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 294 | 64.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 300 | 64.09 | atmosphere | 1005.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 303 | 64.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 304 | 64.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 305 | 64.10 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 307 | 64.10 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 20 |
| 311 | 64.10 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 21 |
| 344 | 64.13 | radiation | 30.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 351 | 64.13 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 352 | 64.14 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 19 |
| 353 | 64.14 | wind | 5.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 358 | 64.15 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 363 | 64.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 364 | 64.16 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 375 | 64.17 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 392 | 64.17 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 393 | 64.18 | wind | 5.0 | 14400 | > th | dose independent | rect. | 2 | 17 |
| 401 | 64.18 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 403 | 64.18 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 412 | 64.19 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 414 | 64.20 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 418 | 64.20 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 426 | 64.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 16 |
| 427 | 64.21 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 431 | 64.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 461 | 64.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 462 | 64.24 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 490 | 64.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 496 | 64.27 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 557 | 64.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 568 | 64.34 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 580 | 64.35 | radiation | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 594 | 64.35 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 4 | 21 |
| 599 | 64.36 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 607 | 64.37 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 611 | 64.37 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 613 | 64.37 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 677 | 64.40 | wind | 5.0 | 14400 | > th | dose dependent | no | NA | NA |
| 716 | 64.42 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 740 | 64.43 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 790 | 64.45 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 811 | 64.46 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 818 | 64.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 823 | 64.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 836 | 64.48 | wind | 9.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 849 | 64.48 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 851 | 64.48 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 861 | 64.49 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 13 |
| 892 | 64.50 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 945 | 64.53 | wind | 9.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 947 | 64.53 | radiation | 20.0 | 90 | < th | dose independent | rect. | 16 | 19 |
| 948 | 64.53 | wind | 5.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 976 | 64.54 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 994 | 64.55 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 998 | 64.55 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 21 |