BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0305800 Os03g0305800|AK105101
(483 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0305800 Galactosyl transferase family protein 855 0.0
Os03g0306100 Galactosyl transferase family protein 522 e-148
Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC... 426 e-119
Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC... 418 e-117
Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC... 414 e-115
Os11g0546500 Galactosyl transferase family protein 308 8e-84
Os02g0723200 Similar to Alpha galactosyltransferase (Fragment) 295 4e-80
>Os03g0305800 Galactosyl transferase family protein
Length = 483
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/483 (87%), Positives = 425/483 (87%)
Query: 1 MSKLQDRHGGEAAADVGRRARHQRLLLSFPVFPIVLLLLAPCTIFFFTSGDVPLPRIRIE 60
MSKLQDRHGGEAAADVGRRARHQRLLLSFPVFPIVLLLLAPCTIFFFTSGDVPLPRIRIE
Sbjct: 1 MSKLQDRHGGEAAADVGRRARHQRLLLSFPVFPIVLLLLAPCTIFFFTSGDVPLPRIRIE 60
Query: 61 YARRDAPTITAVAADTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPVVDDHXXXXXX 120
YARRDAPTITAVAADT ALPVVDDH
Sbjct: 61 YARRDAPTITAVAADTSPPPPSPPSSSPPPLSFPPPPPPPSSPPPPALPVVDDHSDTQRS 120
Query: 121 XXXXXXXXXXPYTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDP 180
PYTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDP
Sbjct: 121 LRRLRQLTDSPYTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDP 180
Query: 181 EGDHLLLRALKNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWW 240
EGDHLLLRALKNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWW
Sbjct: 181 EGDHLLLRALKNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWW 240
Query: 241 VDSDVVFTDMLFEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLD 300
VDSDVVFTDMLFEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLD
Sbjct: 241 VDSDVVFTDMLFEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLD 300
Query: 301 AWAPMGPPGPVRDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNL 360
AWAPMGPPGPVRDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNL
Sbjct: 301 AWAPMGPPGPVRDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNL 360
Query: 361 HGFWADIVDRYEEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAF 420
HGFWADIVDRYEEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAF
Sbjct: 361 HGFWADIVDRYEEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAF 420
Query: 421 NFADDQILELYGFAHESLDTMAVRRVRNDTGRPLDADNQELGRLLHPTFXXXXXXXXXXX 480
NFADDQILELYGFAHESLDTMAVRRVRNDTGRPLDADNQELGRLLHPTF
Sbjct: 421 NFADDQILELYGFAHESLDTMAVRRVRNDTGRPLDADNQELGRLLHPTFKARKKKTSRAA 480
Query: 481 XPM 483
PM
Sbjct: 481 RPM 483
>Os03g0306100 Galactosyl transferase family protein
Length = 449
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 246/340 (72%), Positives = 282/340 (82%), Gaps = 5/340 (1%)
Query: 131 PYTLGPAVTGYDARRAEWLRDHTEFPASVG-RGRPRVLMVTGSAPRRCKDPEGDHLLLRA 189
PY+LG + GYDARR+ WL H EFPA V GRPRVL+VTGSAP RC DP+GDHLLLRA
Sbjct: 108 PYSLGRTILGYDARRSAWLAAHPEFPARVAPAGRPRVLVVTGSAPARCPDPDGDHLLLRA 167
Query: 190 LKNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTD 249
KNKVDYCR+HG D+FY+ LDAEMSGFW KLPLLR LM+AHPE EL+WWVDSD VFTD
Sbjct: 168 FKNKVDYCRIHGLDVFYNTAFLDAEMSGFWAKLPLLRMLMVAHPEAELIWWVDSDAVFTD 227
Query: 250 MLFEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPG 309
MLFE PW RY HNLV+HGW+ V+ K+W+G+N GSF+IRNCQWSLDLLDAWAPMGP G
Sbjct: 228 MLFEIPWERYAVHNLVLHGWEAKVFDEKSWIGVNTGSFLIRNCQWSLDLLDAWAPMGPRG 287
Query: 310 PVRDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVD 369
PVRD YG++FAE L+ RPP+EADDQSAL++LLVTQR RWG KVF+E+SY+L+GFW IVD
Sbjct: 288 PVRDRYGELFAEELSGRPPFEADDQSALIYLLVTQRQRWGDKVFIESSYDLNGFWEGIVD 347
Query: 370 RYEEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILE 429
+YEE+RR G D RWP +THFVGCKPC SY ERCRRGM+RAFNFADDQIL+
Sbjct: 348 KYEELRRA----GRDDGRWPFVTHFVGCKPCRRYADSYPAERCRRGMERAFNFADDQILK 403
Query: 430 LYGFAHESLDTMAVRRVRNDTGRPLDADNQELGRLLHPTF 469
LYGFAHESL+T AVRRVRN+TG PLDA ++ELGRLLHPTF
Sbjct: 404 LYGFAHESLNTTAVRRVRNETGEPLDAGDEELGRLLHPTF 443
>Os03g0300000 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 348
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/339 (61%), Positives = 261/339 (76%), Gaps = 4/339 (1%)
Query: 131 PYTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRAL 190
PYTLGP ++ +D +RA W R H E P V +PRVL+VTGS+P+ C++P GDH LL+++
Sbjct: 6 PYTLGPKISDWDEQRAAWHRRHPETPPFVNDVKPRVLLVTGSSPKPCENPVGDHYLLKSI 65
Query: 191 KNKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDM 250
KNK+DYCRVHG +IFY+ +LDAEM+GFW KLPLLRAL+LAHPE E LWW+DSD +F+DM
Sbjct: 66 KNKMDYCRVHGLEIFYNMALLDAEMAGFWAKLPLLRALLLAHPEIEFLWWMDSDAMFSDM 125
Query: 251 LFEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGP 310
FE PW RY +NL++HGWD VY K W+GLN GSF++RNCQWSLD LD WAPMGP GP
Sbjct: 126 AFELPWERYGPYNLIMHGWDEMVYDDKNWIGLNTGSFLLRNCQWSLDFLDTWAPMGPKGP 185
Query: 311 VRDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDR 370
VR GK+ + L +RP +EADDQSA+V++L T+R +WG KV+LEN Y LHG+W +VDR
Sbjct: 186 VRIEAGKVLTKYLKDRPVFEADDQSAMVYILATEREKWGDKVYLENGYYLHGYWGILVDR 245
Query: 371 YEEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILEL 430
YEEM + HPGLGD RWPL+THFVGCKPC G Y ERC + M+RAFNF D+QIL++
Sbjct: 246 YEEMLENY-HPGLGDHRWPLVTHFVGCKPC-GKFGDYPVERCLKQMERAFNFGDNQILQM 303
Query: 431 YGFAHESLDTMAVRRVRNDTGRPLDADNQELGRLLHPTF 469
YGF H+SL + V+R+RN+T PLD + ELG LLHP F
Sbjct: 304 YGFTHKSLGSRKVKRIRNETSNPLDVKD-ELG-LLHPAF 340
>Os02g0529600 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 480
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 187/324 (57%), Positives = 242/324 (74%), Gaps = 2/324 (0%)
Query: 132 YTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALK 191
Y LGP ++ +D +R WLR + FP++V G+PR+L+VTGS P C +P GDH LL+ K
Sbjct: 144 YALGPKISDWDGQRRRWLRQNPGFPSTVAGGKPRILLVTGSQPGPCDNPLGDHYLLKTTK 203
Query: 192 NKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDML 251
NK+DYCR+HG +I ++ LD E++G+W KLPLLR LML+HPE E +WW+DSD +FTDM
Sbjct: 204 NKIDYCRLHGIEIVHNLAHLDTELAGYWAKLPLLRRLMLSHPEVEWIWWMDSDALFTDMA 263
Query: 252 FEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPV 311
FE P RY+ NL+IHG+ ++ +W+ LN GSF+ RNCQWSLDLLDAWAPMGP G +
Sbjct: 264 FELPLSRYQDRNLIIHGYQDLLFEKHSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGFI 323
Query: 312 RDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDRY 371
RD GKI L RP +EADDQSAL++LL++Q+ +W KVF+ENSY LHGFWA +VD+Y
Sbjct: 324 RDEAGKILTANLKGRPAFEADDQSALIYLLLSQKEKWMNKVFIENSYYLHGFWAGLVDKY 383
Query: 372 EEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILELY 431
EEM HPGLGD+RWP +THFVGCKPCG Y ERC R M+RAFNFAD+Q+L LY
Sbjct: 384 EEMMEN-HHPGLGDERWPFVTHFVGCKPCGS-YGDYPVERCLRSMERAFNFADNQVLRLY 441
Query: 432 GFAHESLDTMAVRRVRNDTGRPLD 455
GFAH+ L++ ++RVRN T +P+D
Sbjct: 442 GFAHKGLESPKIKRVRNQTTKPID 465
>Os12g0149300 Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1)
Length = 463
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/323 (59%), Positives = 241/323 (74%), Gaps = 2/323 (0%)
Query: 132 YTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALK 191
YTLGP VT ++A+R +WL + FP+ RG+PR+L+VTGS P C D GDH LL+A K
Sbjct: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATK 187
Query: 192 NKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDML 251
NK+DYCR+HG +I +S LD E++G+W KLPLLR LML+HPE E +WW+DSD +FTDM
Sbjct: 188 NKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMA 247
Query: 252 FEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPV 311
FE P RY NLVIHG+ ++ ++W+ LN GSF++RNCQWSL+LLDAWAPMGP G V
Sbjct: 248 FELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRV 307
Query: 312 RDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDRY 371
RD GK+ +LT RP +EADDQSAL+ +L+TQ+ RW KV++E+ Y LHGFWA +VD+Y
Sbjct: 308 RDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKY 367
Query: 372 EEMRRQWRHPGLGDDRWPLITHFVGCKPCGGDDASYDGERCRRGMDRAFNFADDQILELY 431
EEM + HPGLGD+RWP +THFVGCKPCGG Y ERC GM+RAFNFAD+Q+L LY
Sbjct: 368 EEMMER-HHPGLGDERWPFVTHFVGCKPCGG-YGDYPRERCLGGMERAFNFADNQVLRLY 425
Query: 432 GFAHESLDTMAVRRVRNDTGRPL 454
GF H SL + VRRV N T PL
Sbjct: 426 GFRHRSLASARVRRVANRTDNPL 448
>Os11g0546500 Galactosyl transferase family protein
Length = 483
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 207/344 (60%), Gaps = 47/344 (13%)
Query: 138 VTGYDARRAEWLRDHTEFP---ASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALKNKV 194
+TG+DARRA W+R +P + GR RV+MV+GS C+ GDHLL R LKNKV
Sbjct: 124 ITGWDARRAAWMR--LRYPRGLNATAAGRERVVMVSGSQAPPCRGEGGDHLLFRFLKNKV 181
Query: 195 DYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDMLFEP 254
DYCR+HG ++ Y+N +L M +W K+P +RA MLAHP+ E +WWVD+D VFTDM F
Sbjct: 182 DYCRLHGVELLYNNALLQPRMLAYWAKIPAVRAAMLAHPDAEWVWWVDADAVFTDMDFSL 241
Query: 255 PWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPVRDM 314
P +Y+ HNLV++GW+ VYG ++W+GLNAG F+IRNCQWSLD +DAWA MGP P
Sbjct: 242 PLHKYKDHNLVVYGWNKEVYGERSWVGLNAGVFLIRNCQWSLDFMDAWARMGPASPEYAR 301
Query: 315 YGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFWADIVDRYEEM 374
+G + +TL + E+DDQSALV+LL +WGAK +LE Y G+W ++VDR +++
Sbjct: 302 WGSVLHDTLRGKSDKESDDQSALVYLLSEHEEKWGAKTYLEKGYFFQGYWVEVVDRLDDI 361
Query: 375 RRQW----------------RHPGLGDDRW-------------------------PLITH 393
++ RH +R+ P +TH
Sbjct: 362 AARYEAAERRPSAAAAHLRRRHAEREHERYAAARNAAVRGAVPGPAGGGQSGWRRPFVTH 421
Query: 394 FVGCKPCGGD-DASYDGERCRRGMDRAFNFADDQILELYGFAHE 436
F GC+PCGG+ + Y + C GM+RA NFADDQ+L YG+ H+
Sbjct: 422 FTGCQPCGGEPNKIYSKKSCADGMNRALNFADDQVLRNYGYRHK 465
>Os02g0723200 Similar to Alpha galactosyltransferase (Fragment)
Length = 447
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 196/340 (57%), Gaps = 39/340 (11%)
Query: 132 YTLGPAVTGYDARRAEWLRDHTEFPASVGRGRPRVLMVTGSAPRRCKDPEGDHLLLRALK 191
YT+ + G+D +RAEWLR H E G G RVLMV+GS P C P GD LL R LK
Sbjct: 91 YTIDRPIVGWDEKRAEWLRAHPEL---AGGGGERVLMVSGSQPEPCGSPAGDSLLTRLLK 147
Query: 192 NKVDYCRVHGFDIFYSNTVLDAEMSGFWTKLPLLRALMLAHPETELLWWVDSDVVFTDML 251
NK+DYCR++G + Y+ +L M +W K+P++RA M+AHPE E +WWVDSD V TDM
Sbjct: 148 NKLDYCRLNGVQLLYNTALLRPSMDRYWAKIPVVRAAMVAHPEAEWVWWVDSDAVLTDMD 207
Query: 252 FEPPWGRYRRHNLVIHGWDGAVYGAKTWLGLNAGSFIIRNCQWSLDLLDAWAPMGPPGPV 311
F P RYR HN V HGW VY +++W LNAG F+IRNCQWSLD +DAWA MGP P
Sbjct: 208 FRLPLSRYRDHNFVAHGWPHLVYESRSWTSLNAGVFLIRNCQWSLDFMDAWAAMGPDSPE 267
Query: 312 RDMYGKIFAETLTNRPPYEADDQSALVFLLVTQRHRWGAKVFLENSYNLHGFW------- 364
+G + T ++ E+DDQSALV++L+ W KV+LE+ Y G+W
Sbjct: 268 YQHWGAVLTSTFKDKVFNESDDQSALVYMLLQSGSPWRDKVYLESDYYFEGYWLEIAGRL 327
Query: 365 ADIVDRYEEMRR-----QWRH-----------------------PGLGDDRWPLITHFVG 396
+I +RYE M R + RH G+ R P +THF G
Sbjct: 328 GNITERYEAMERGAAPLRRRHAEAEHASYAAARDAALAGAGLAESGVSGWRRPFVTHFTG 387
Query: 397 CKPCGGD-DASYDGERCRRGMDRAFNFADDQILELYGFAH 435
C+PC G + Y G+ C G+ RA +FADDQ+L YGF H
Sbjct: 388 CQPCSGHRNEHYTGKSCDEGIRRALSFADDQVLRAYGFRH 427
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.142 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,206,743
Number of extensions: 766289
Number of successful extensions: 1907
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1892
Number of HSP's successfully gapped: 8
Length of query: 483
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 378
Effective length of database: 11,553,331
Effective search space: 4367159118
Effective search space used: 4367159118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)