Os11g0546500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Galactosyl transferase family protein.
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Os11g0546500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Galactosyl transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.8 | 0.516 | 6.28 | 2.58 | 1.51 | -1.12 | -0.996 | 1.13 | 0.687 | 17 | 21.5 | 2085 | -- | -- |
| 123.15 | 0.517 | 6.33 | 2.34 | 1.43 | -1.25 | -1.09 | -- | 0.648 | 16.9 | 21.4 | 1366 | -- | -- |
| 123.16 | 0.517 | 6.28 | 2.62 | 1.49 | -1.15 | -- | 1.19 | 0.702 | 17.1 | 21.6 | 2218 | -- | -- |
| 125.11 | 0.521 | 6.32 | 2.22 | 1.44 | -1.23 | -- | -- | 0.615 | 17 | 21.4 | 1366 | -- | -- |
| 233.22 | 0.711 | 6.23 | 2.69 | -- | -1.09 | -- | 1.52 | 0.748 | -- | 22.3 | 2581 | -- | -- |
| 165.15 | 0.602 | 6.4 | 1.72 | 1.5 | -- | -1.16 | -- | 0.251 | 16.8 | -- | -- | -- | -- |
| 168.52 | 0.608 | 6.41 | 1.71 | 1.5 | -- | -- | -- | 0.245 | 16.9 | -- | -- | -- | -- |
| 234.2 | 0.713 | 6.31 | 2.19 | -- | -1.32 | -- | -- | 0.577 | -- | 21.35 | 1228 | -- | -- |
| 232.39 | 0.71 | 6.41 | -- | 1.36 | -0.615 | -- | -- | 0.298 | 16.9 | 22.3 | 1243 | -- | -- |
| 286.55 | 0.791 | 6.39 | 1.66 | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
| 245.74 | 0.733 | 6.45 | -- | 1.47 | -- | -- | -- | 0.0545 | 16.9 | -- | -- | -- | -- |
| 337.9 | 0.856 | 6.4 | -- | -- | -0.674 | -- | -- | 0.216 | -- | 22.32 | 1164 | -- | -- |
| 358.93 | 0.884 | 6.43 | -- | -- | -- | -- | -- | 0.0227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 3 | 118.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 16 | 120.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 25 | 121.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 45 | 121.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 58 | 122.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 68 | 122.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 92 | 122.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 122 | 123.03 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 139 | 123.22 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 21 |
| 151 | 123.32 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 163 | 123.39 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 213 | 123.61 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 255 | 123.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 268 | 123.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 288 | 123.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 298 | 123.93 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 302 | 123.94 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 448 | 124.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 565 | 124.65 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 570 | 124.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 590 | 124.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 643 | 124.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 669 | 124.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 670 | 124.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 998 | 125.80 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |