Os02g0723200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha galactosyltransferase (Fragment).
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Os02g0723200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha galactosyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.59 | 0.435 | 10.5 | 1.27 | 0.543 | -0.496 | -1.02 | -0.499 | 0.669 | 16.4 | 25.22 | 504 | -- | -- |
| 85.98 | 0.432 | 10.5 | 1.41 | 0.554 | -0.53 | -1.2 | -- | 0.721 | 16.6 | 25.25 | 499 | -- | -- |
| 87.76 | 0.436 | 10.5 | 1.13 | 0.549 | -0.457 | -- | -0.949 | 0.613 | 16 | 25.3 | 459 | -- | -- |
| 89.6 | 0.441 | 10.5 | 1.4 | 0.563 | -0.514 | -- | -- | 0.711 | 16.1 | 25.2 | 461 | -- | -- |
| 97.26 | 0.459 | 10.5 | 1.23 | -- | -0.592 | -- | -0.713 | 0.602 | -- | 25.01 | 2455 | -- | -- |
| 97.39 | 0.463 | 10.5 | 1.27 | 0.362 | -- | -1.02 | -- | 0.506 | 15.4 | -- | -- | -- | -- |
| 99.77 | 0.468 | 10.5 | 1.25 | 0.367 | -- | -- | -- | 0.499 | 14 | -- | -- | -- | -- |
| 96.92 | 0.459 | 10.5 | 1.44 | -- | -0.63 | -- | -- | 0.663 | -- | 25 | 2477 | -- | -- |
| 138.5 | 0.548 | 10.5 | -- | 0.443 | -0.241 | -- | -- | 0.462 | 15 | 25.1 | 376 | -- | -- |
| 107.85 | 0.485 | 10.5 | 1.23 | -- | -- | -- | -- | 0.49 | -- | -- | -- | -- | -- |
| 140.89 | 0.555 | 10.6 | -- | 0.344 | -- | -- | -- | 0.36 | 14 | -- | -- | -- | -- |
| 146.74 | 0.564 | 10.5 | -- | -- | -0.193 | -- | -- | 0.429 | -- | 25.01 | 2459 | -- | -- |
| 148.01 | 0.568 | 10.6 | -- | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 2 | 79.00 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 9 | 79.79 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 42 | 81.74 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 48 | 81.97 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 67 | 82.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 11 |
| 68 | 82.51 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 85 | 82.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 98 | 82.90 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 102 | 82.97 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 109 | 83.06 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 130 | 83.29 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 136 | 83.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 11 | 18 |
| 140 | 83.38 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 162 | 83.58 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 12 |
| 168 | 83.66 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 172 | 83.67 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 186 | 83.81 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 14 |
| 193 | 83.84 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 214 | 83.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 221 | 84.01 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 232 | 84.07 | temperature | 10.0 | 10 | > th | dose dependent | sin | 17 | NA |
| 235 | 84.08 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 10 |
| 275 | 84.34 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 278 | 84.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 6 |
| 280 | 84.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 299 | 84.42 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 21 |
| 300 | 84.42 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 318 | 84.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 346 | 84.61 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 354 | 84.63 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 365 | 84.69 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 369 | 84.72 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 15 |
| 381 | 84.79 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 432 | 84.94 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 449 | 85.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 504 | 85.17 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 13 |
| 517 | 85.20 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 18 |
| 523 | 85.20 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 610 | 85.45 | temperature | 30.0 | 30 | < th | dose dependent | sin | 17 | NA |
| 612 | 85.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 614 | 85.46 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 615 | 85.46 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 618 | 85.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 619 | 85.46 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 5 |
| 624 | 85.46 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 12 |
| 626 | 85.46 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 627 | 85.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 644 | 85.49 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 4 | 12 |
| 662 | 85.51 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 671 | 85.53 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 697 | 85.58 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 4 |
| 709 | 85.61 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 11 |
| 740 | 85.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 19 |
| 746 | 85.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 19 |
| 768 | 85.71 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 13 | 16 |
| 770 | 85.72 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 779 | 85.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 5 |
| 783 | 85.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 787 | 85.77 | temperature | 25.0 | 720 | > th | dose independent | rect. | 23 | 20 |
| 799 | 85.79 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 12 |
| 801 | 85.80 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 23 |
| 822 | 85.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 6 |
| 856 | 85.91 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 883 | 85.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 19 |
| 893 | 85.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 17 |
| 917 | 85.99 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 12 | 19 |
| 939 | 86.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 19 |
| 957 | 86.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 959 | 86.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 9 |