BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0498600 Os11g0498600|AK071051
(152 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0498600 Similar to HVA22 protein 240 4e-64
Os09g0450600 TB2/DP1 and HVA22 related protein family protein 118 2e-27
Os11g0602300 Similar to HVA22-like protein a (AtHVA22a) 116 6e-27
Os06g0226600 TB2/DP1 and HVA22 related protein family protein 108 2e-24
Os02g0747500 Similar to HVA22-like protein e (AtHVA22e) 108 2e-24
Os08g0467500 TB2/DP1 and HVA22 related protein family protein 80 4e-16
>Os11g0498600 Similar to HVA22 protein
Length = 152
Score = 240 bits (612), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/152 (80%), Positives = 123/152 (80%)
Query: 1 MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL 60
MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL
Sbjct: 1 MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL 60
Query: 61 ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKHGLXXXXXXXXXSVGXX 120
ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKHGL SVG
Sbjct: 61 ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKHGLAGAGAGAAASVGKK 120
Query: 121 XXXXXXXXXXXXXXXXXXFLSFVTPKKDHEAY 152
FLSFVTPKKDHEAY
Sbjct: 121 DKSSPSSSPKDKEKTKSKFLSFVTPKKDHEAY 152
>Os09g0450600 TB2/DP1 and HVA22 related protein family protein
Length = 98
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 64/73 (87%)
Query: 32 MESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIAWLALPNFRGAAF 91
MES SK+DDEQWL YWILYS ITL+EM L ++YWIP+WYE K+LF+AWL LP FRGA+F
Sbjct: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLPQFRGASF 60
Query: 92 IYNRFVREQLRKH 104
IY++FVREQL+K+
Sbjct: 61 IYDKFVREQLKKN 73
>Os11g0602300 Similar to HVA22-like protein a (AtHVA22a)
Length = 314
Score = 116 bits (290), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 67/93 (72%)
Query: 14 LAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYEL 73
LAGP V L YPLYASV+A+E+ S +DD+QWL YW++YS ITL E+ S+I W+P W +
Sbjct: 17 LAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSM 76
Query: 74 KLLFIAWLALPNFRGAAFIYNRFVREQLRKHGL 106
KL+FI WL LP F GAAF+Y +VR KH +
Sbjct: 77 KLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQM 109
>Os06g0226600 TB2/DP1 and HVA22 related protein family protein
Length = 193
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 62/85 (72%)
Query: 14 LAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYEL 73
LAGP V L YPLYASV+A+E+ S +DD+QWL YW+LYSFITL E+ +I W+P W
Sbjct: 17 LAGPLVSLAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITLFELTFAPVIEWLPFWSYA 76
Query: 74 KLLFIAWLALPNFRGAAFIYNRFVR 98
KL F WL LP F GAA++Y+ FVR
Sbjct: 77 KLFFNCWLVLPCFHGAAYVYDHFVR 101
>Os02g0747500 Similar to HVA22-like protein e (AtHVA22e)
Length = 192
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%)
Query: 4 LWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESL 63
L ++ ++ LAGP V L YPLYASV+A+E+ S +DD+QWL YW+LYSFITL E+ +
Sbjct: 9 LKVVVKNLDVLAGPIVSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFSPV 68
Query: 64 IYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVR 98
+ W+P+W KL F WL LP F GAA +Y FVR
Sbjct: 69 LEWLPLWSYAKLFFNCWLVLPYFNGAAHVYEHFVR 103
>Os08g0467500 TB2/DP1 and HVA22 related protein family protein
Length = 88
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 47/55 (85%)
Query: 50 YSFITLVEMLLESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKH 104
++ ITL+EM+ E ++YWIP+WY +K+LF+AWL LP F+GA+FIY + VREQLRK+
Sbjct: 5 WAIITLLEMVAEPVLYWIPVWYPVKVLFVAWLVLPQFKGASFIYKKLVREQLRKY 59
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.141 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,249,220
Number of extensions: 130028
Number of successful extensions: 316
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 315
Number of HSP's successfully gapped: 6
Length of query: 152
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 60
Effective length of database: 12,232,113
Effective search space: 733926780
Effective search space used: 733926780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 151 (62.8 bits)