BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0236100 Os11g0236100|J090067P14
(398 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0236100 Glycosyl transferase, group 1 domain containin... 580 e-166
Os08g0301500 Similar to Sucrose-phosphate synthase 2 (EC 2.... 204 8e-53
Os02g0184400 Similar to Sucrose-phosphate synthase 9 (EC 2.... 184 1e-46
AK121341 80 2e-15
Os04g0249500 Similar to Sucrose synthase 75 7e-14
Os04g0309600 Similar to Sucrose synthase 74 2e-13
Os02g0831500 Similar to Sucrose synthase 74 2e-13
Os06g0194900 Sucrose synthase 2 (EC 2.4.1.13) 74 3e-13
Os03g0340500 Similar to Sucrose synthase (EC 2.4.1.13) 70 3e-12
Os03g0401300 Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP ... 70 4e-12
>Os11g0236100 Glycosyl transferase, group 1 domain containing protein
Length = 398
Score = 580 bits (1496), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/398 (74%), Positives = 297/398 (74%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL
Sbjct: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
PVVATKNGGPVDILKVLSNGLLVDPHD DKSRWSECRRSGLRNIHRFS
Sbjct: 61 PVVATKNGGPVDILKVLSNGLLVDPHDAAAITAALLSLLADKSRWSECRRSGLRNIHRFS 120
Query: 121 WPHHCRLYLSHVAASCDHPAPHQLLRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
WPHHCRLYLSHVAASCDHPAPHQLLRV
Sbjct: 121 WPHHCRLYLSHVAASCDHPAPHQLLRVPPSPSSSSAAAAAAGGGGAAASSEPLSDSLRDL 180
Query: 181 XXXXXVDAASPDLSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXIGFAPGRRQSLLVVAID 240
VDAASPDLSAG IGFAPGRRQSLLVVAID
Sbjct: 181 SLRISVDAASPDLSAGDSAAAILDALRRRRSTDRPAASSAARAIGFAPGRRQSLLVVAID 240
Query: 241 CYGDDGKPNVEQLKKVVELAMSXXXXXXXXXXXYVLSTGMTIPEAVDALRACGADPAGFD 300
CYGDDGKPNVEQLKKVVELAMS YVLSTGMTIPEAVDALRACGADPAGFD
Sbjct: 241 CYGDDGKPNVEQLKKVVELAMSAGDGDDAGGRGYVLSTGMTIPEAVDALRACGADPAGFD 300
Query: 301 ALICSSGAEICYPWKGEQLAADEEYAGHVAFRWPGDHVRSAVPRLGKADGXXXXXXXXXX 360
ALICSSGAEICYPWKGEQLAADEEYAGHVAFRWPGDHVRSAVPRLGKADG
Sbjct: 301 ALICSSGAEICYPWKGEQLAADEEYAGHVAFRWPGDHVRSAVPRLGKADGAQEADLAVDA 360
Query: 361 XXCSVHCHAYAAKDASKVSRAERHRRHDNEHHSTTNTS 398
CSVHCHAYAAKDASKVSRAERHRRHDNEHHSTTNTS
Sbjct: 361 AACSVHCHAYAAKDASKVSRAERHRRHDNEHHSTTNTS 398
>Os08g0301500 Similar to Sucrose-phosphate synthase 2 (EC 2.4.1.14) (Fragment)
Length = 1066
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 90/134 (67%), Positives = 109/134 (81%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
+LKLID+YDLYGQVAYPKHHKQ++VP IYRLAA+TKGVFIN A +EPFGLT+IEAAAYGL
Sbjct: 552 ILKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGVFINCAFIEPFGLTLIEAAAYGL 611
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
P+VAT+NGGPVDI +VL NG+LVDPH+ DK W++CR++GL+NIH+FS
Sbjct: 612 PMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYKLVSDKQLWAQCRQNGLKNIHQFS 671
Query: 121 WPHHCRLYLSHVAA 134
WP HC+ YLS V
Sbjct: 672 WPEHCKNYLSRVGT 685
>Os02g0184400 Similar to Sucrose-phosphate synthase 9 (EC 2.4.1.14)
Length = 1011
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 99/132 (75%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
VL LID YDLYGQVAYPKHHK ++VP IYRLAA+TKG F+N A E FG+T+IEAA GL
Sbjct: 569 VLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGAFVNVAYFEQFGVTLIEAAMNGL 628
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
P++ATKNG PV+I +VL+NGLLVDPHD DK WS CR +GL+NIH+FS
Sbjct: 629 PIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKLLSDKQLWSRCRENGLKNIHQFS 688
Query: 121 WPHHCRLYLSHV 132
WP HC+ YLS +
Sbjct: 689 WPEHCKNYLSRI 700
>AK121341
Length = 382
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 235 LVVAIDCYGDDGKPNVEQLKKVVELAMSXXXXXXXXXXX-YVLSTGMTIPEAVDALRACG 293
V+A+DCYGDDG + L+ + E+ + + LST M +PE + L+
Sbjct: 97 FVIAVDCYGDDGSASKRMLQVIQEVFRAVRSDSQMSRISGFALSTAMPLPETLKLLQLGK 156
Query: 294 ADPAGFDALICSSGAEICYPWK------GEQLAADEEYAGHVAFRWPGDHVRSAVPRLGK 347
P FDALIC SG+E+ YP G +L D++Y H+ RW D + + +L
Sbjct: 157 IPPTDFDALICGSGSEVYYPSTAQCVDAGGRLRPDQDYLLHINHRWSHDGAKQTIAKLAH 216
Query: 348 ADGXXXXXXXXXXXXCSVHCHAYAAKDASKVSRAERHR 385
DG C+ HC ++ KD +KV + R
Sbjct: 217 -DG-SGTNVEPDVESCNPHCVSFFIKDPNKVRTIDEMR 252
>Os04g0249500 Similar to Sucrose synthase
Length = 798
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 4 LIDRYDLYGQVAYPKHHKQTDVP---HIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
L+DRY L GQ+ + K QTD +YR A TKG F+ PAL E FGLT+IEA GL
Sbjct: 636 LMDRYQLKGQIRWIK--AQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 693
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNI 116
P AT GGP +I+ +G V+P + D S W++ +GL+ I
Sbjct: 694 PTFATNQGGPAEIIIDGVSGFHVNPINGREAGIKIADFFQKCKEDPSYWNKVSTAGLQRI 753
Query: 117 HRFS 120
+ +
Sbjct: 754 YEWQ 757
>Os04g0309600 Similar to Sucrose synthase
Length = 844
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 4 LIDRYDLYGQVAYPKHHKQTDVP---HIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
L+DRY L GQ+ + K QTD +YR A TKG F+ PAL E FGLT+IEA GL
Sbjct: 625 LMDRYQLKGQIRWIK--AQTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 682
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNI 116
P AT GGP +I+ +G V+P + D S W++ +GL+ I
Sbjct: 683 PTFATNQGGPAEIIIDGVSGFHVNPINDREAGIKIADFFQKCKEDPSYWNKVSTAGLQRI 742
Query: 117 HR-FSW 121
++W
Sbjct: 743 CECYTW 748
>Os02g0831500 Similar to Sucrose synthase
Length = 846
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 4 LIDRYDLYGQVAYPKHHKQTDVP---HIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
LI++Y L GQ+ + K QTD +YR A TKG F+ PAL E FGLT+IEA GL
Sbjct: 633 LINKYQLVGQIRWIKG--QTDRVRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGL 690
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNI 116
P AT GGP +I+ +G ++P + D WS+ +GL+ I
Sbjct: 691 PTFATNQGGPAEIIVDEVSGFHINPLNGKEASDKIADFFQKCKEDLIYWSKMSTAGLQRI 750
Query: 117 HR-FSW 121
+ ++W
Sbjct: 751 YECYTW 756
>Os06g0194900 Sucrose synthase 2 (EC 2.4.1.13)
Length = 808
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 4 LIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 62
LID+Y L G + + + +YR TKGVF+ PA E FGLT+IEA GLP
Sbjct: 627 LIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAFYEAFGLTVIEAMTCGLPT 686
Query: 63 VATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNIH- 117
+AT +GGP +I+ +GL +DP+ D + W + GL+ I+
Sbjct: 687 IATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQDSTYWDNISQGGLQRIYE 746
Query: 118 RFSW 121
+++W
Sbjct: 747 KYTW 750
>Os03g0340500 Similar to Sucrose synthase (EC 2.4.1.13)
Length = 809
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 3 KLIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP 61
+LI Y+L+GQ + + +YR A T G F+ PA E FGLT++EA GLP
Sbjct: 630 ELIKTYNLFGQFRWISAQTNRARNGELYRYIADTHGAFVQPAFYEAFGLTVVEAMTCGLP 689
Query: 62 VVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNIH 117
AT +GGP +I++ +G +DP+ D + W E GL+ I+
Sbjct: 690 TFATVHGGPAEIIEHGISGFHIDPYHPDQAANLIADFFEQCKQDPNHWVEVSNRGLQRIY 749
Query: 118 -RFSW 121
+++W
Sbjct: 750 EKYTW 754
>Os03g0401300 Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase
2)
Length = 816
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 1 VLKLIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYG 59
+ LI++Y+L G + + + +YR TKG F+ PA E FGLT++E+ G
Sbjct: 632 MFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCG 691
Query: 60 LPVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRN 115
LP AT GGP +I+ +G +DP+ D S W++ + GL+
Sbjct: 692 LPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQR 751
Query: 116 I-HRFSW 121
I +++W
Sbjct: 752 IEEKYTW 758
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,842,820
Number of extensions: 362151
Number of successful extensions: 770
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 764
Number of HSP's successfully gapped: 10
Length of query: 398
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 295
Effective length of database: 11,657,759
Effective search space: 3439038905
Effective search space used: 3439038905
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)