Os03g0340500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose synthase (EC 2.4.1.13).
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Os03g0340500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose synthase (EC 2.4.1.13).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.61 | 0.383 | 11.8 | 0.141 | 1.78 | 0.69 | 0.182 | -0.68 | 0.136 | 18.2 | 0.8832 | 110 | -- | -- |
| 69.32 | 0.388 | 11.8 | 0.124 | 1.78 | 0.689 | 0.183 | -- | 0.131 | 18.2 | 0.8002 | 110 | -- | -- |
| 66.69 | 0.38 | 11.8 | 0.139 | 1.78 | 0.687 | -- | -0.68 | 0.137 | 18.2 | 0.9 | 110 | -- | -- |
| 69.37 | 0.388 | 11.8 | 0.13 | 1.8 | 0.682 | -- | -- | 0.13 | 18.3 | 0.786 | 114 | -- | -- |
| 197.55 | 0.658 | 11.8 | 0.095 | -- | 0.775 | -- | -0.713 | 0.0605 | -- | 0.9 | 110 | -- | -- |
| 74.78 | 0.405 | 11.8 | 0.0676 | 1.87 | -- | -0.448 | -- | 0.0755 | 19.9 | -- | -- | -- | -- |
| 75.37 | 0.407 | 11.8 | 0.0801 | 1.87 | -- | -- | -- | 0.0752 | 19.9 | -- | -- | -- | -- |
| 195.85 | 0.655 | 11.8 | 0.102 | -- | 0.794 | -- | -- | 0.103 | -- | 0.04736 | 11 | -- | -- |
| 69.79 | 0.389 | 11.8 | -- | 1.79 | 0.67 | -- | -- | 0.115 | 18.3 | 0.8 | 114 | -- | -- |
| 265.64 | 0.762 | 11.8 | 0.0601 | -- | -- | -- | -- | 0.0504 | -- | -- | -- | -- | -- |
| 75.54 | 0.407 | 11.8 | -- | 1.87 | -- | -- | -- | 0.0663 | 19.9 | -- | -- | -- | -- |
| 196.13 | 0.654 | 11.8 | -- | -- | 0.793 | -- | -- | 0.0919 | -- | 0.04736 | 11 | -- | -- |
| 265.73 | 0.761 | 11.8 | -- | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 56.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 56.33 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 4 | 56.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 5 | 56.45 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 8 | 56.64 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 9 | 56.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 14 | 56.92 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 16 | 56.98 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 32 | 57.89 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 36 | 58.02 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 52 | 58.82 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 53 | 58.82 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 54 | 58.87 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 61 | 59.17 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 75 | 59.45 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 76 | 59.45 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 77 | 59.49 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 94 | 60.16 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 97 | 60.22 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 99 | 60.22 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 101 | 60.22 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 153 | 60.22 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 157 | 60.22 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 214 | 60.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 219 | 60.50 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 231 | 60.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 237 | 60.92 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 238 | 61.01 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 252 | 61.24 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 253 | 61.28 | radiation | 1.0 | 30 | > th | dose independent | rect. | 17 | 19 |
| 283 | 61.75 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 291 | 61.82 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 7 |
| 305 | 61.86 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 308 | 61.88 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 316 | 62.02 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 357 | 62.27 | wind | 5.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 361 | 62.29 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 8 |
| 370 | 62.36 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 373 | 62.37 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 374 | 62.37 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 380 | 62.39 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 409 | 62.60 | temperature | 15.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 411 | 62.60 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 412 | 62.61 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 425 | 62.66 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 432 | 62.69 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 22 |
| 456 | 62.77 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 8 | 19 |
| 464 | 62.78 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 493 | 62.84 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 523 | 62.91 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 589 | 63.01 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 603 | 63.03 | radiation | 1.0 | 90 | < th | dose independent | sin | 9 | NA |
| 685 | 63.15 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 688 | 63.15 | temperature | 15.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 756 | 63.27 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 766 | 63.28 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 8 |
| 796 | 63.32 | temperature | 25.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 808 | 63.34 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 811 | 63.35 | temperature | 15.0 | 14400 | < th | dose independent | no | NA | NA |
| 816 | 63.35 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 843 | 63.39 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 885 | 63.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 932 | 63.52 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 942 | 63.53 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 997 | 63.60 | temperature | 15.0 | 14400 | > th | dose independent | sin | 0 | NA |