Os11g0236100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, group 1 domain containing protein.
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Os11g0236100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, group 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.15 | 0.346 | 14.1 | 0.777 | 0.741 | -1.38 | 0.351 | 2.61 | -0.149 | 0.585 | 16.6 | 1361 | -- | -- |
| 62.34 | 0.368 | 14.1 | 0.464 | 0.694 | -1.47 | 0.471 | -- | -0.176 | 0.343 | 9.047 | 7540 | -- | -- |
| 54.54 | 0.344 | 14.1 | 0.767 | 0.775 | -1.4 | -- | 2.7 | -0.149 | 0.46 | 16.66 | 1289 | -- | -- |
| 62.97 | 0.37 | 14.1 | 0.415 | 0.68 | -1.46 | -- | -- | -0.198 | 0.168 | 10.21 | 7552 | -- | -- |
| 71.1 | 0.395 | 14.1 | 0.183 | -- | -1.74 | -- | 1.03 | -0.286 | -- | 16.66 | 1289 | -- | -- |
| 97.13 | 0.462 | 14.2 | -0.316 | 0.65 | -- | 0.387 | -- | -0.591 | 0.371 | -- | -- | -- | -- |
| 97.71 | 0.463 | 14.2 | -0.33 | 0.65 | -- | -- | -- | -0.592 | 0.165 | -- | -- | -- | -- |
| 71.94 | 0.397 | 14.2 | 0.0377 | -- | -1.9 | -- | -- | -0.328 | -- | 12.29 | 6031 | -- | -- |
| 61.55 | 0.365 | 14.2 | -- | 0.7 | -1.41 | -- | -- | -0.342 | 23.7 | 13.17 | 1855 | -- | -- |
| 124.27 | 0.521 | 14.2 | -0.309 | -- | -- | -- | -- | -0.582 | -- | -- | -- | -- | -- |
| 100.58 | 0.469 | 14.2 | -- | 0.645 | -- | -- | -- | -0.555 | 0.137 | -- | -- | -- | -- |
| 71.97 | 0.396 | 14.2 | -- | -- | -1.89 | -- | -- | -0.334 | -- | 13.17 | 1855 | -- | -- |
| 126.78 | 0.526 | 14.2 | -- | -- | -- | -- | -- | -0.548 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 15 |
| 2 | 49.15 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 3 | 49.17 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 15 | 49.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 35 | 50.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 16 |
| 40 | 50.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 42 | 50.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 50 | 51.12 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 57 | 51.22 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 8 |
| 69 | 51.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 78 | 51.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 14 |
| 119 | 51.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 122 | 51.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 13 |
| 125 | 51.53 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 254 | 51.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 15 |
| 280 | 51.96 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 309 | 52.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 354 | 52.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 357 | 52.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 12 |
| 390 | 52.35 | temperature | 30 | 270 | < th | dose dependent | sin | 21 | NA |
| 394 | 52.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 462 | 52.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 490 | 52.61 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 494 | 52.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 17 |
| 538 | 52.73 | temperature | 20 | 270 | > th | dose dependent | sin | 23 | NA |
| 547 | 52.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 598 | 52.88 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 13 |
| 865 | 53.58 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |