BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0236100 Os11g0236100|J090067P14
(398 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10120.1 | chr4:6315033-6319785 FORWARD LENGTH=1051 220 1e-57
AT1G04920.1 | chr1:1391674-1395756 REVERSE LENGTH=1063 205 4e-53
AT5G20280.1 | chr5:6844994-6849997 REVERSE LENGTH=1044 204 9e-53
AT5G11110.1 | chr5:3536426-3540901 FORWARD LENGTH=1048 200 9e-52
AT1G73370.1 | chr1:27584533-27588326 REVERSE LENGTH=943 73 3e-13
AT5G49190.1 | chr5:19943369-19947189 REVERSE LENGTH=808 72 6e-13
AT3G43190.1 | chr3:15179204-15182577 REVERSE LENGTH=809 72 8e-13
AT5G20830.1 | chr5:7050599-7054032 REVERSE LENGTH=809 71 8e-13
AT5G37180.1 | chr5:14718238-14722913 FORWARD LENGTH=837 64 1e-10
AT4G02280.1 | chr4:995166-998719 FORWARD LENGTH=810 64 1e-10
>AT4G10120.1 | chr4:6315033-6319785 FORWARD LENGTH=1051
Length = 1050
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 113/132 (85%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
VLKLID+YDLYGQVAYPKHHKQ++VP IYRLAAKTKGVFINPALVEPFGLT+IEAAAYGL
Sbjct: 561 VLKLIDQYDLYGQVAYPKHHKQSEVPDIYRLAAKTKGVFINPALVEPFGLTLIEAAAYGL 620
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
P+VAT+NGGPVDI+K L+NGLLVDPHD +K W+ECR++GL+NIHRFS
Sbjct: 621 PIVATRNGGPVDIVKALNNGLLVDPHDQQAISDALLKLVANKHLWAECRKNGLKNIHRFS 680
Query: 121 WPHHCRLYLSHV 132
WP HCR YLSHV
Sbjct: 681 WPEHCRNYLSHV 692
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 226 FAPGRRQSLLVVAIDCYGDDG--KPNVEQLKKVVELAMSXXXXXXXXXXXYVLSTGMTIP 283
++PGRRQ L VVA+D Y D+G K N+ ++ K + + +VL++G ++
Sbjct: 767 YSPGRRQMLFVVAVDSYDDNGNIKANLNEIIK--NMIKAADLTSGKGKIGFVLASGSSLQ 824
Query: 284 EAVDALRACGADPAGFDALICSSGAEICYPWKGEQLAADEEYAGHVAFRWPGDHVRSAVP 343
E VD + + FDA++C+SG+EI YPW+ + D +Y HV ++WPG+ +RS +
Sbjct: 825 EVVDITQKNLINLEDFDAIVCNSGSEIYYPWR--DMMVDADYETHVEYKWPGESIRSVIL 882
Query: 344 RLGKADGXXXXXXXXXXXXCSVHCHAYAAKDASKVSRAERHRRH 387
RL + CS C+A + K K R + R+
Sbjct: 883 RLICTEPAAEDDITEYASSCSTRCYAISVKQGVKTRRVDDLRQR 926
>AT1G04920.1 | chr1:1391674-1395756 REVERSE LENGTH=1063
Length = 1062
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 107/134 (79%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
VLKLID+YDLYG VAYPKHHKQ+DVP IYRLAA TKGVFINPALVEPFGLT+IEAAA+GL
Sbjct: 542 VLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEAAAHGL 601
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
P+VATKNGGPVDI + L NGLLVDPHD +K+ W ECR +G +NIH FS
Sbjct: 602 PMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKNIHLFS 661
Query: 121 WPHHCRLYLSHVAA 134
WP HCR YL+ +AA
Sbjct: 662 WPEHCRTYLTRIAA 675
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 230 RRQSLLVVAIDCYGDDGKPNVEQLKKVVELAMSXXXX--XXXXXXXYVLSTGMTIPEAVD 287
RR+ L+V+A+DCY ++G P+ + + +++ + + +ST M + E
Sbjct: 770 RRERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPLDELTR 829
Query: 288 ALRACGADPAGFDALICSSGAEICYPWKGE-QLAADEEYAGHVAFRWPGDHVRSAVPRL- 345
L++ + FD LICSSG+E+ YP E +L D +Y+ H+ +RW + +++ V +L
Sbjct: 830 FLKSAKIQVSEFDTLICSSGSEVYYPGGEEGKLLPDPDYSSHIDYRWGMEGLKNTVWKLM 889
Query: 346 ------GKADGXXXXXXXXXXXXCS-VHCHAYAAKDASKVSRAERHRR 386
G+A S HC AY KD SKV R + R+
Sbjct: 890 NTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQ 937
>AT5G20280.1 | chr5:6844994-6849997 REVERSE LENGTH=1044
Length = 1043
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 108/130 (83%)
Query: 5 IDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPVVA 64
ID+YDLYGQVAYPKHHKQ+DVP IYRLAAK+KGVFINPA++EPFGLT+IEAAA+GLP+VA
Sbjct: 538 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHGLPMVA 597
Query: 65 TKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFSWPHH 124
TKNGGPVDI +VL NGLLVDPHD DK W++CR++GL+NIH+FSWP H
Sbjct: 598 TKNGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQFSWPEH 657
Query: 125 CRLYLSHVAA 134
C+ YLS + +
Sbjct: 658 CKTYLSRITS 667
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 230 RRQSLLVVAIDCYGDDGKPNVEQLKKVVELAMSXXXXXXXXXXXYVLSTGMTIPEAVDAL 289
RR+ ++V+A+D G++ +E K++++ + ++LST +TI E L
Sbjct: 763 RRKFIVVIALDFDGEED--TLEATKRILD---AVEKERAEGSVGFILSTSLTISEVQSFL 817
Query: 290 RACGADPAGFDALICSSGAEICYPWKGEQ---LAADEEYAGHVAFRWPGDHVRSAVPR 344
+ G +P FDA IC+SG+++ Y + D Y H+ +RW G+ +R + R
Sbjct: 818 VSGGLNPNDFDAFICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIR 875
>AT5G11110.1 | chr5:3536426-3540901 FORWARD LENGTH=1048
Length = 1047
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
Query: 1 VLKLIDRYDLYGQVAYPKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
+LKLID+YDLYGQVA PKHH+Q+DVP IYRLAAKTKGVFINPA +EPFGLT+IEA A+GL
Sbjct: 536 ILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHGL 595
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXXDKSRWSECRRSGLRNIHRFS 120
P VAT NGGPVDI +VL NGLLVDPHD D+ W CR++GL NIH FS
Sbjct: 596 PTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLFS 655
Query: 121 WPHHCRLYLSHVAASCDHPAP 141
WP HC+ YL+ + ASC P
Sbjct: 656 WPEHCKTYLARI-ASCKQRHP 675
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 230 RRQSLLVVAIDCYGDDGKPNVEQLKKVVELAMSXXXXXXXXXXXYVLSTGMTIPEAVDAL 289
RR+++ V+++DC V +K V++ A ++LST MTI E AL
Sbjct: 762 RRKNIFVISVDCSATSDLLAV--VKTVIDAA------GRGSSTGFILSTSMTISETHTAL 813
Query: 290 RACGADPAGFDALICSSGAEICYPWKGEQ------LAADEEYAGHVAFRWPGDHVRSAVP 343
+ G P FDA+ICSSG+E+ + G + D +Y H+ FRW G+ +R +
Sbjct: 814 LSGGLKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLI 873
Query: 344 R 344
R
Sbjct: 874 R 874
>AT1G73370.1 | chr1:27584533-27588326 REVERSE LENGTH=943
Length = 942
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 4 LIDRYDLYGQVAYPKHHKQTDV---PHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGL 60
LI++Y L G+ + QTD +YR A TKGVF+ PAL E FGLT+IEA GL
Sbjct: 637 LIEKYKLKGKFRWIAA--QTDRYRNSELYRCIADTKGVFVQPALYEAFGLTVIEAMNCGL 694
Query: 61 PVVATKNGGPVDILKVLSNGLLVDPHDXXXXXXX----XXXXXXDKSRWSECRRSGLRNI 116
P AT GGP +I+ +G +DP++ D W + GL+ I
Sbjct: 695 PTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTKIGDFFSKCRSDGLYWDNISKGGLKRI 754
Query: 117 HR-FSWPHHCRLYL 129
+ ++W + L
Sbjct: 755 YECYTWKIYAEKLL 768
>AT5G49190.1 | chr5:19943369-19947189 REVERSE LENGTH=808
Length = 807
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 4 LIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 62
LI++YDL+G+ + + +YR A TKGVF+ PA E FGLT++E+ LP
Sbjct: 630 LIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPT 689
Query: 63 VATKNGGPVDILKVLSNGLLVDPHD----XXXXXXXXXXXXXDKSRWSECRRSGLRNIH- 117
AT +GGP +I++ +G +DP+ + + W + GL+ I+
Sbjct: 690 FATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYE 749
Query: 118 RFSWPHHCR--LYLSHVAASCDH 138
R++W + L L+ V A H
Sbjct: 750 RYTWKKYSERLLTLAGVYAFWKH 772
>AT3G43190.1 | chr3:15179204-15182577 REVERSE LENGTH=809
Length = 808
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 3 KLIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP 61
+LI+ Y L GQ + + +YR TKG F+ PAL E FGLT++EA GLP
Sbjct: 631 ELIEEYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690
Query: 62 VVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXXXX----DKSRWSECRRSGLRNIH 117
AT NGGP +I+ +G +DP+ D S W + GL I
Sbjct: 691 TFATCNGGPAEIIVHGKSGFHIDPYHGDKAAESLADFFTKCKHDPSHWDQISLGGLERIQ 750
Query: 118 -RFSWPHHCRLYLS 130
+++W + + L+
Sbjct: 751 EKYTWQIYSQRLLT 764
>AT5G20830.1 | chr5:7050599-7054032 REVERSE LENGTH=809
Length = 808
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 4 LIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 62
LI+ Y L GQ + + +YR TKG F+ PAL E FGLT++EA GLP
Sbjct: 632 LIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPT 691
Query: 63 VATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNI-H 117
AT GGP +I+ +G +DP+ D S W E + GL+ I
Sbjct: 692 FATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEE 751
Query: 118 RFSWPHHCRLYLS 130
+++W + + L+
Sbjct: 752 KYTWQIYSQRLLT 764
>AT5G37180.1 | chr5:14718238-14722913 FORWARD LENGTH=837
Length = 836
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 4 LIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLPV 62
LI++Y L GQ + +T +YR A T+G F+ PA E FGLT+IEA + GL
Sbjct: 626 LIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAFVQPAHYEAFGLTVIEAMSCGLVT 685
Query: 63 VATKNGGPVDILKVLSNGLLVDPHDXXXXXXX----XXXXXXDKSRWSECRRSGLRNIHR 118
AT GGP +I+ +G +DP + D W+ GL+ I+
Sbjct: 686 FATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIADFFEKSGMDPDYWNMFSNEGLQRINE 745
Query: 119 -FSW 121
++W
Sbjct: 746 CYTW 749
>AT4G02280.1 | chr4:995166-998719 FORWARD LENGTH=810
Length = 809
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 3 KLIDRYDLYGQVAY-PKHHKQTDVPHIYRLAAKTKGVFINPALVEPFGLTIIEAAAYGLP 61
L+ Y L GQ + + +YR A T+G F PA E FGLT++EA GLP
Sbjct: 632 NLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPAFYEAFGLTVVEAMTCGLP 691
Query: 62 VVATKNGGPVDILKVLSNGLLVDPHDXXXXXXXXXXX----XXDKSRWSECRRSGLRNIH 117
AT +GGP +I++ +G +DP+ D + W + +GL+ I+
Sbjct: 692 TFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCKEDPNHWKKVSDAGLQRIY 751
Query: 118 -RFSW 121
R++W
Sbjct: 752 ERYTW 756
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,538,678
Number of extensions: 210183
Number of successful extensions: 412
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 405
Number of HSP's successfully gapped: 14
Length of query: 398
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 297
Effective length of database: 8,337,553
Effective search space: 2476253241
Effective search space used: 2476253241
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)