Os02g0831500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose synthase.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0831500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Sucrose synthase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.83 | 0.552 | 5.19 | 0.874 | 0.754 | -2.11 | -0.285 | 1.82 | 0.231 | 12.1 | 15.14 | 303 | -- | -- |
| 140.47 | 0.552 | 5.22 | 0.661 | 0.773 | -2.06 | -0.2 | -- | 0.162 | 12.1 | 15 | 292 | -- | -- |
| 138.04 | 0.547 | 5.19 | 0.851 | 0.73 | -2.1 | -- | 1.72 | 0.234 | 12.3 | 15.4 | 327 | -- | -- |
| 140.26 | 0.552 | 5.22 | 0.57 | 0.703 | -2.05 | -- | -- | 0.169 | 12.3 | 15.24 | 339 | -- | -- |
| 149.7 | 0.57 | 5.21 | 0.886 | -- | -2.23 | -- | 1.28 | 0.244 | -- | 1.861 | 681 | -- | -- |
| 188.24 | 0.643 | 5.29 | 0.133 | 0.81 | -- | -0.529 | -- | -0.154 | 9.08 | -- | -- | -- | -- |
| 189.21 | 0.644 | 5.29 | 0.115 | 0.81 | -- | -- | -- | -0.154 | 9.15 | -- | -- | -- | -- |
| 150.95 | 0.572 | 5.23 | 0.662 | -- | -2.21 | -- | -- | 0.184 | -- | 8.389 | 698 | -- | -- |
| 148.06 | 0.567 | 5.25 | -- | 0.717 | -1.81 | -- | -- | 0.0559 | 11.9 | 15.2 | 314 | -- | -- |
| 227.19 | 0.704 | 5.31 | 0.113 | -- | -- | -- | -- | -0.15 | -- | -- | -- | -- | -- |
| 189.56 | 0.644 | 5.29 | -- | 0.81 | -- | -- | -- | -0.167 | 9.14 | -- | -- | -- | -- |
| 161.29 | 0.591 | 5.26 | -- | -- | -1.97 | -- | -- | 0.0789 | -- | 9.435 | 669 | -- | -- |
| 227.52 | 0.704 | 5.31 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 5 | 136.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 16 | 137.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 17 | 137.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 30 | 138.14 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 32 | 138.20 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 45 | 138.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 49 | 138.45 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 59 | 138.64 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 81 | 138.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 84 | 138.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 130 | 139.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 151 | 139.95 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 161 | 140.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 187 | 140.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 190 | 140.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 285 | 141.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 309 | 141.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 316 | 141.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 322 | 141.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 359 | 141.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 361 | 141.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 445 | 141.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 474 | 142.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 528 | 142.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 2 |