BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0199700 Os11g0199700|AK073816
(588 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0199700 Similar to Seed protein B32E (Fragment) 1011 0.0
Os02g0273700 VHS domain containing protein 310 2e-84
Os06g0332400 VHS domain containing protein 282 6e-76
Os01g0229200 VHS domain containing protein 273 2e-73
Os05g0475300 VHS domain containing protein 218 9e-57
Os01g0825700 Similar to VHS2 protein (Fragment) 214 2e-55
Os08g0109000 ENTH/VHS domain containing protein 178 1e-44
Os02g0697300 ENTH/VHS domain containing protein 120 3e-27
Os05g0339000 VHS domain containing protein 106 5e-23
Os10g0578000 Similar to hepatocyte growth factor-regulated ... 78 2e-14
>Os11g0199700 Similar to Seed protein B32E (Fragment)
Length = 588
Score = 1011 bits (2613), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/588 (85%), Positives = 504/588 (85%)
Query: 1 MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILT 60
MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDT VQILT
Sbjct: 1 MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTLKLLKKRLGNKNSKVQILT 60
Query: 61 LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASG 120
LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASG
Sbjct: 61 LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASG 120
Query: 121 RYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDXXXXXXX 180
RYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYED
Sbjct: 121 RYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDAAIQASL 180
Query: 181 XXXXXXXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM 240
EIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM
Sbjct: 181 QSSAPSAPALSLSEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM 240
Query: 241 DLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGVXXXXXXXXXXXNVNRGTAPPRPTG 300
DLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGV NVNRGTAPPRPTG
Sbjct: 241 DLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGVPPGSGPAPAAANVNRGTAPPRPTG 300
Query: 301 VSFSPLLNVHHEDDEPEDEFSVLSRRSARDGTAAQGNLPSAPKSERXXXXXXXXXXXXXK 360
VSFSPLLNVHHEDDEPEDEFSVLSRRSARDGTAAQGNLPSAPKSER K
Sbjct: 301 VSFSPLLNVHHEDDEPEDEFSVLSRRSARDGTAAQGNLPSAPKSERPYPSPLLPPPPSSK 360
Query: 361 RPVFTEASSVDYLSGDSYKTEKVSDDFXXXXXXXXXXXXSHSKTETNPPPSYDSRSESVS 420
RPVFTEASSVDYLSGDSYKTEKVSDDF SHSKTETNPPPSYDSRSESVS
Sbjct: 361 RPVFTEASSVDYLSGDSYKTEKVSDDFINPTAPANIPAPSHSKTETNPPPSYDSRSESVS 420
Query: 421 DDFINPTAAPSFSMPSRPMSESNRPAVNRQESLPDDDFINPTAIPGFSSSSNANKYGDSG 480
DDFINPTAAPSFSMPSRPMSESNRPAVNRQESLPDDDFINPTAIPGFSSSSNANKYGDSG
Sbjct: 421 DDFINPTAAPSFSMPSRPMSESNRPAVNRQESLPDDDFINPTAIPGFSSSSNANKYGDSG 480
Query: 481 EDLPKAPWEAQAPGSLPPPPARYGQRQQYFEQQHGLPSGNNGAGYNGLVSQTEGLSLNQR 540
EDLPKAPWEAQAPGSLPPPPARYGQRQQYFEQQHGLPSGNNGAGYNGLVSQTEGLSLNQR
Sbjct: 481 EDLPKAPWEAQAPGSLPPPPARYGQRQQYFEQQHGLPSGNNGAGYNGLVSQTEGLSLNQR 540
Query: 541 NTENERGSSVPTASRQTKPEDSLFKDLVDFXXXXXXXXXXXXXXRRTR 588
NTENERGSSVPTASRQTKPEDSLFKDLVDF RRTR
Sbjct: 541 NTENERGSSVPTASRQTKPEDSLFKDLVDFAKNKPSSPSKPANSRRTR 588
>Os02g0273700 VHS domain containing protein
Length = 634
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/279 (55%), Positives = 189/279 (67%), Gaps = 25/279 (8%)
Query: 7 CAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLET 66
+RAT+DMLIGPDWA+N+E+CD +N DPGQAKD VQ+L L +LET
Sbjct: 5 LVDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRIAHRNAKVQLLALTLLET 64
Query: 67 LSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQYH 126
+ KNCGD+V+ Q+ E+DIL EMVKIVKK+PD +V+EKIL+LIDTWQ FGG RYPQY+
Sbjct: 65 MIKNCGDIVHMQVAEKDILHEMVKIVKKRPDFHVKEKILTLIDTWQEVFGGVRARYPQYY 124
Query: 127 AAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYP---------PPGQSYEDXXXX 177
AAYQEL AG FP R +VP+FTPPQTQPL+ YP PPG S D
Sbjct: 125 AAYQELLRAGAVFPQRSNGSVPIFTPPQTQPLQN---YPASLRSAQQEPPGSSVPD---- 177
Query: 178 XXXXXXXXXXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQG 237
EIQ+ARGI+DVL EMLNALD + EG+R+EVIVDLV QCRSY+
Sbjct: 178 ---------LPSLSLAEIQNARGIMDVLSEMLNALDPSNREGLRQEVIVDLVDQCRSYKQ 228
Query: 238 RVMDLVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGV 276
RV++LV+ T +E LL Q L LND+LQRVL +HD IA GV
Sbjct: 229 RVVELVNTTSNEELLSQGLSLNDDLQRVLAKHDAIAAGV 267
>Os06g0332400 VHS domain containing protein
Length = 683
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/270 (54%), Positives = 183/270 (67%), Gaps = 4/270 (1%)
Query: 7 CAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLET 66
+RATS+ LIGPDW++N+E+CDI+N DP QAKD +Q+L L +LET
Sbjct: 6 LVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQLLALTLLET 65
Query: 67 LSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQYH 126
L KNCGD V+ + ERDIL EMVKI KKKPD +V+EKIL LIDTWQ AFGG+ RYPQY+
Sbjct: 66 LIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYY 125
Query: 127 AAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDXXXXXXXXXXXXX 186
AYQEL AG FP R +++VP++TPPQTQPLR PP +
Sbjct: 126 VAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRN----LPPALRNTERQQEAPESSSTPE 181
Query: 187 XXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMDLVSNT 246
EIQ+ARG++DVL EMLNA+D + EG+R+EVIVDLV QCRSY+ RV+ LV++T
Sbjct: 182 VPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNST 241
Query: 247 GDESLLFQALGLNDELQRVLQRHDDIAKGV 276
DE LL Q L LND+LQRVL +HD IA G+
Sbjct: 242 TDEELLSQGLSLNDDLQRVLAKHDAIAAGI 271
>Os01g0229200 VHS domain containing protein
Length = 711
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 173/275 (62%), Gaps = 14/275 (5%)
Query: 4 AVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYV 63
A + +RATSDMLIGPDWA N+E+CDI N DPGQ+KD VQIL L +
Sbjct: 2 AGSMVDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALKKRIGHKNPKVQILALTL 61
Query: 64 LETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYP 123
LET KNCGD+ + + ERD+L EMVKIVKKK D NV+EK+L++IDTWQ AFGG RYP
Sbjct: 62 LETAIKNCGDIFHMHVAERDVLHEMVKIVKKKSDQNVKEKVLTMIDTWQEAFGGPRARYP 121
Query: 124 QYHAAYQELRNAGVDFPPREENTVPLFT--PPQTQPLRQPHLYPPPGQSYEDXXXXXXXX 181
QY+AAY +L AG FP R + PLF P + +R P
Sbjct: 122 QYYAAYHDLVRAGAAFPKRSDRPAPLFNGQSPAGRNMRSPD------------QQDEAES 169
Query: 182 XXXXXXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMD 241
EIQ+ARGI+DVL EMLNALD + EG+R+EVIV+LV QCR+Y+ RV+
Sbjct: 170 SAGNDFPALSMSEIQNARGIMDVLAEMLNALDPGNREGLRQEVIVELVDQCRTYKQRVVL 229
Query: 242 LVSNTGDESLLFQALGLNDELQRVLQRHDDIAKGV 276
LV+ T DE L+ Q L LND+LQRVL +HD IA G+
Sbjct: 230 LVNATADEELMSQGLALNDDLQRVLAKHDAIAAGI 264
>Os05g0475300 VHS domain containing protein
Length = 625
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 159/270 (58%), Gaps = 12/270 (4%)
Query: 9 ERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLETLS 68
++ATS +L GPDWA+N+E+CD +N D Q KD VQ TL +LET+
Sbjct: 20 DKATSHLLQGPDWAINLEICDTLNADRWQTKDVVKAVKKRLQHKDPRVQFFTLTLLETMM 79
Query: 69 KNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQYHAA 128
KNCG+ V+ +++E+ IL EMV+IV+KK D VR+K+L L+D+WQ AFGG G+YPQY+ +
Sbjct: 80 KNCGEYVHFEVVEQHILQEMVRIVQKKHDTQVRDKVLILLDSWQEAFGGPGGKYPQYYWS 139
Query: 129 YQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDXX--XXXXXXXXXXX 186
Y EL+ +G+ FP R + P+FTPP T H QSY
Sbjct: 140 YIELKRSGIMFPRRPVDAPPIFTPPATH-----HT-----QSYGSPTYPAGSLNERMTSD 189
Query: 187 XXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMDLVSNT 246
++ + R ++L +M+NAL+ V++E+I +LV QCRS Q ++M VS+T
Sbjct: 190 VETLSLGDLNNIRDTTELLCDMVNALNPSDRMAVKDEIISELVTQCRSNQQKLMRFVSST 249
Query: 247 GDESLLFQALGLNDELQRVLQRHDDIAKGV 276
G+E LL Q L +ND LQ VL +HD IA G
Sbjct: 250 GNEELLKQGLEINDHLQSVLAKHDAIASGA 279
>Os01g0825700 Similar to VHS2 protein (Fragment)
Length = 597
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 155/268 (57%), Gaps = 12/268 (4%)
Query: 8 AERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLETL 67
E+ATS +L+GPDWAVN+E+CDIIN D Q KD VQ L +LET+
Sbjct: 22 VEKATSHLLMGPDWAVNLEICDIINADVWQTKDVVKAVKKRLQNKDPKVQFYALTLLETM 81
Query: 68 SKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASGRYPQYHA 127
KNCG+ V ++ E+ +L EMVKI++KK D+ VR+KIL L+D+WQ AFGG +YPQYH
Sbjct: 82 MKNCGEYVQLEVAEQHVLQEMVKIIQKKNDMLVRDKILLLLDSWQEAFGGPGSKYPQYHF 141
Query: 128 AYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYED--XXXXXXXXXXXX 185
AY E++ G FP R + P+FTPP T QSY
Sbjct: 142 AYLEVKRIGAVFPRRPIDAPPIFTPPATH----------TSQSYGSPRYEAGSLNEIMSS 191
Query: 186 XXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVMDLVSN 245
++ + R + ++L +M++AL+ V++E+I DLV QCRS Q ++M VS+
Sbjct: 192 DVETLSLGDLNNIRNVTELLCDMVHALNPSDHMAVKDEIITDLVSQCRSNQQKLMQFVSS 251
Query: 246 TGDESLLFQALGLNDELQRVLQRHDDIA 273
TG+E LL Q L +ND LQ ++ ++D +A
Sbjct: 252 TGNEQLLKQGLEINDRLQNIISKYDIMA 279
>Os08g0109000 ENTH/VHS domain containing protein
Length = 401
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 151/272 (55%), Gaps = 7/272 (2%)
Query: 1 MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILT 60
MA+ + A ATS+ L DWA NIE+C+++ DPG+AKD Q+
Sbjct: 1 MASEMVKA--ATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYA 58
Query: 61 LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKKPDLNVREKILSLIDTWQVAFGGASG 120
+ +LE L NCG+ +++Q+I+ +L +VKIVKKK +L VREKI L+D Q + GG G
Sbjct: 59 VMLLEMLMNNCGEPIHKQVIDNGLLPILVKIVKKKTELPVREKIFLLLDATQTSLGGVKG 118
Query: 121 RYPQYHAAYQELRNAGVDFPPREENTVPLFTPPQTQPLRQPHLYPPPGQSYEDXXXXXXX 180
++PQY+ AY EL +AGV F R V P P+ +P + P +
Sbjct: 119 KFPQYYGAYYELVSAGVQFSNRPNVVVTQAQAP--VPVPEPTIEP---NNNSLSRRLDEG 173
Query: 181 XXXXXXXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM 240
I+ A +++VL ++L+++D RHPEG +E ++DLV QC + R+M
Sbjct: 174 QKEVHAQPVSESSIIRKASSVMEVLKDVLDSMDPRHPEGATDEFVLDLVEQCTFQKQRIM 233
Query: 241 DLVSNTGDESLLFQALGLNDELQRVLQRHDDI 272
LV + DE ++ QA+ LN+EL +VL RHD +
Sbjct: 234 HLVMTSRDEVVVSQAIELNEELHKVLVRHDAL 265
>Os02g0697300 ENTH/VHS domain containing protein
Length = 392
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 138/275 (50%), Gaps = 23/275 (8%)
Query: 7 CAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLET 66
E ATS+ L GPDW+ N+E+CD+IN + + + VQ L+L +LET
Sbjct: 51 IVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARVQYLSLVLLET 110
Query: 67 LSKNCGDVVYQQIIERDILSEMVKIVKK-KPDLNVREKILSLIDTWQVAFGGASG---RY 122
+ KNC + ER +L EMV+++ + +N R K L LI+ W G SG RY
Sbjct: 111 IVKNCEKAFSEVAAER-VLDEMVRLIDDPQTVVNNRNKALMLIEAW-----GESGDELRY 164
Query: 123 -PQYHAAYQELRNAGVDFPPRE-ENTVPLFTPPQTQPLRQPHLYPPPGQSYEDXXXXXXX 180
P Y Y+ L++ GV FP R+ E+ P+FTP ++ + Q++ED
Sbjct: 165 LPVYEETYKSLKSRGVRFPGRDNESLAPIFTPARSVAEAEVDANFSQ-QTFEDVQVHTYT 223
Query: 181 XXXXXXXXXXXXXEIQSARGIVDVLDEMLNALDHRHPEGVREEVIVDLVGQCRSYQGRVM 240
AR +++L +L++ + +++++ LV QC Q +
Sbjct: 224 AEETKEA-------FDVARNSIELLSTVLSS--SPQQDALQDDLTSTLVQQCYQSQHTIQ 274
Query: 241 DLVSNTGD-ESLLFQALGLNDELQRVLQRHDDIAK 274
++ GD E++LF+AL +NDE+Q+VL +++ + K
Sbjct: 275 RMIETAGDNEAMLFEALSVNDEIQKVLSKYEQMKK 309
>Os05g0339000 VHS domain containing protein
Length = 136
Score = 106 bits (265), Expect = 5e-23, Method: Composition-based stats.
Identities = 48/95 (50%), Positives = 63/95 (66%)
Query: 1 MATAVACAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILT 60
MA A ++ATS++L+GPDW +NI++CD +N D GQAK+ VQ
Sbjct: 1 MAAAAVRVDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRLQHKNSKVQFFA 60
Query: 61 LYVLETLSKNCGDVVYQQIIERDILSEMVKIVKKK 95
L +LETL KNCGD V+ Q++ERDIL EM+KIVKKK
Sbjct: 61 LTLLETLMKNCGDHVHSQVVERDILQEMIKIVKKK 95
>Os10g0578000 Similar to hepatocyte growth factor-regulated tyrosine kinase
substrate-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 11/143 (7%)
Query: 7 CAERATSDMLIGPDWAVNIELCDIINMDPGQAKDTXXXXXXXXXXXXXXVQILTLYVLET 66
+ AT + + PDWA N+E+CD++N + + VQ L L +LET
Sbjct: 51 IVDEATLETMDAPDWATNLEICDMVNTGNVNSIELIRAIKRRIMLKNPRVQYLALVLLET 110
Query: 67 LSKNCGDVVYQQIIERDILSEMVKIVKK-KPDLNVREKILSLIDTWQVAFGGASG---RY 122
+ KNC + + +I +L EMVK++ + +N R K L LI+ W G SG RY
Sbjct: 111 VVKNC-EKAFSEIAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAW-----GESGDELRY 164
Query: 123 -PQYHAAYQELRNAGVDFPPREE 144
P Y Y+ LR+ G+ FP R++
Sbjct: 165 LPVYEETYKSLRSRGIRFPGRDD 187
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,205,749
Number of extensions: 902667
Number of successful extensions: 2976
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2960
Number of HSP's successfully gapped: 11
Length of query: 588
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 482
Effective length of database: 11,501,117
Effective search space: 5543538394
Effective search space used: 5543538394
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 159 (65.9 bits)