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Os11g0199700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Seed protein B32E (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.95 (0.0126) R2 : 0.631
β1 : 1.24 (0.0461) R2dD : 0.604 R2D : 0.456
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.342 (0.0269) R2dN8 : 0.175 R2N8 : 0.0268
σ : 0.236
deviance : 25.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.37 0.201 9.95 1.29 0.111 0.884 -0.593 1.14 0.41 8.72 0.4238 1438 -- --
19.11 0.204 9.94 1.4 0.0938 0.651 -0.619 -- 0.413 8.47 0.43 1428 -- --
19.25 0.204 9.95 1.24 0.134 1.02 -- 1.64 0.403 9.06 0.2598 1445 -- --
20.18 0.209 9.94 1.41 0.0978 0.649 -- -- 0.421 10.1 0.4227 1432 -- --
19.87 0.208 9.95 1.25 -- 0.997 -- 1.53 0.411 -- 0.25 1426 -- --
23.85 0.229 9.95 1.25 0.111 -- -0.557 -- 0.341 8.58 -- -- -- --
24.75 0.233 9.95 1.24 0.117 -- -- -- 0.342 10 -- -- -- --
20.61 0.211 9.94 1.39 -- 0.651 -- -- 0.411 -- 0.4273 1390 -- --
61.19 0.364 9.92 -- 0.0951 0.588 -- -- 0.427 10 9.635 4313 -- --
25.57 0.236 9.95 1.24 -- -- -- -- 0.342 -- -- -- -- --
65.22 0.378 9.98 -- 0.114 -- -- -- 0.204 9.22 -- -- -- --
57.27 0.352 9.92 -- -- 0.647 -- -- 0.426 -- 9.214 26911 -- --
65.97 0.379 9.98 -- -- -- -- -- 0.205 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.61 wind 9.0 43200 > th dose independent rect. 19 2
2 17.69 precipitation 0.1 43200 > th dose dependent rect. 17 1
3 17.70 wind 9.0 43200 > th dose dependent rect. 19 2
4 17.71 wind 9.0 43200 < th dose independent rect. 19 2
5 17.78 precipitation 0.1 43200 < th dose independent rect. 17 1
6 17.78 precipitation 0.1 43200 < th dose dependent rect. 17 1
8 17.79 precipitation 0.1 43200 > th dose independent rect. 17 1
11 17.89 wind 9.0 43200 > th dose independent rect. 18 4
12 17.92 radiation 1.0 1440 < th dose dependent sin 16 NA
14 17.92 radiation 1.0 1440 < th dose dependent rect. 8 12
20 17.94 radiation 1.0 1440 < th dose dependent rect. 17 3
42 17.96 radiation 1.0 1440 < th dose dependent rect. 17 7
43 17.96 radiation 1.0 1440 < th dose dependent rect. 11 8
119 18.05 wind 9.0 43200 > th dose dependent rect. 17 8
151 18.12 atmosphere 1000.0 43200 < th dose dependent rect. 4 1
176 18.17 wind 9.0 43200 > th dose independent rect. 18 7
211 18.27 atmosphere 1000.0 43200 < th dose independent rect. 3 1
212 18.27 temperature 25.0 1440 > th dose independent rect. 16 6
225 18.29 temperature 25.0 1440 < th dose independent rect. 16 6
242 18.31 wind 9.0 43200 < th dose independent rect. 18 7
255 18.33 atmosphere 1000.0 43200 > th dose independent rect. 3 1
260 18.34 atmosphere 1000.0 43200 > th dose independent rect. 12 1
274 18.36 wind 9.0 43200 < th dose independent rect. 18 9
282 18.37 temperature 25.0 1440 < th dose independent rect. 16 4
283 18.37 atmosphere 1000.0 43200 < th dose dependent sin 10 NA
288 18.38 atmosphere 1000.0 43200 < th dose independent rect. 12 1
344 18.43 temperature 20.0 1440 > th dose dependent rect. 17 1
366 18.45 radiation 1.0 1440 < th dose independent sin 16 NA
382 18.46 atmosphere 1000.0 43200 > th dose independent rect. 20 1
424 18.47 atmosphere 1000.0 43200 > th dose independent rect. 24 13
425 18.47 atmosphere 1000.0 43200 < th dose independent rect. 24 13
443 18.48 atmosphere 1000.0 43200 > th dose independent rect. 20 11
449 18.48 atmosphere 1000.0 43200 > th dose independent rect. 20 17
450 18.48 atmosphere 1000.0 43200 < th dose independent rect. 20 17
455 18.49 atmosphere 1000.0 43200 > th dose independent sin 8 NA
456 18.49 atmosphere 1000.0 43200 < th dose independent sin 8 NA
458 18.49 radiation 1.0 1440 > th dose independent sin 16 NA
656 18.53 atmosphere 1000.0 43200 < th dose independent rect. 20 1
664 18.53 radiation 1.0 1440 < th dose independent rect. 11 9
670 18.53 radiation 1.0 1440 < th dose independent rect. 8 12
682 18.53 atmosphere 1000.0 43200 < th dose independent rect. 11 17
683 18.53 atmosphere 1000.0 43200 > th dose independent rect. 10 18
697 18.53 atmosphere 1000.0 43200 > th dose independent rect. 15 22
700 18.53 radiation 1.0 1440 < th dose independent rect. 8 22
711 18.54 atmosphere 1000.0 43200 < th dose independent rect. 15 1
719 18.54 radiation 1.0 1440 < th dose independent rect. 12 7
739 18.54 atmosphere 1000.0 43200 < th dose independent rect. 15 13
770 18.54 radiation 1.0 1440 < th dose independent rect. 11 19
788 18.54 atmosphere 1000.0 43200 < th dose independent rect. 5 23
807 18.55 atmosphere 1000.0 43200 > th dose independent rect. 15 1
829 18.55 atmosphere 1000.0 43200 > th dose independent rect. 15 13
838 18.55 atmosphere 1000.0 43200 < th dose independent rect. 15 15
919 18.56 atmosphere 1000.0 43200 > th dose independent no NA NA
921 18.56 atmosphere 1000.0 43200 < th dose independent no NA NA
996 18.56 atmosphere 1000.0 43200 > th dose independent rect. 23 22