BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0109700 Os11g0109700|AK059364
(553 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0109700 Protein of unknown function Cys-rich family pr... 936 0.0
Os01g0825900 Protein of unknown function Cys-rich family pr... 338 6e-93
Os12g0109700 Protein of unknown function Cys-rich family pr... 293 2e-79
Os11g0109600 Protein of unknown function Cys-rich family pr... 263 2e-70
Os05g0341900 244 1e-64
Os03g0299800 Protein of unknown function Cys-rich family pr... 241 7e-64
Os05g0474900 Protein of unknown function Cys-rich family pr... 226 4e-59
>Os11g0109700 Protein of unknown function Cys-rich family protein
Length = 553
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/553 (83%), Positives = 464/553 (83%)
Query: 1 MLLACDCDDDAQTAENGNAPMLSNYRAQXXXXXXXXXXXDKPQRAHWLRQLKPWRRNAAD 60
MLLACDCDDDAQTAENGNAPMLSNYRAQ DKPQRAHWLRQLKPWRRNAAD
Sbjct: 1 MLLACDCDDDAQTAENGNAPMLSNYRAQPAPPLAEPLLLDKPQRAHWLRQLKPWRRNAAD 60
Query: 61 DHLSAGIAINWSSVRSATKDWITNPMNIAMLLWLLCXXXXXXXXXXXXXXXXXXXFPTPA 120
DHLSAGIAINWSSVRSATKDWITNPMNIAMLLWLLC FPTPA
Sbjct: 61 DHLSAGIAINWSSVRSATKDWITNPMNIAMLLWLLCVAVSGAMLVLLLLGLLDGAFPTPA 120
Query: 121 ARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGAGPRHG 180
ARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGAGPRHG
Sbjct: 121 ARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGAGPRHG 180
Query: 181 ERXXXXXXXXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXXXXXXXXXXXXXXCS 240
ER CQYVLCGLYWGYTKKTRPELVENGFF CS
Sbjct: 181 ERAHMAVVVALLHLTVACQYVLCGLYWGYTKKTRPELVENGFFVLGVVAPVVAVVYTVCS 240
Query: 241 PLGKDNYGELACPNAFDSVSQHKCTGHAVVEPEWAGGMFDCGGDATAWWLSLSCTFCAFG 300
PLGKDNYGELACPNAFDSVSQHKCTGHAVVEPEWAGGMFDCGGDATAWWLSLSCTFCAFG
Sbjct: 241 PLGKDNYGELACPNAFDSVSQHKCTGHAVVEPEWAGGMFDCGGDATAWWLSLSCTFCAFG 300
Query: 301 WNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMXXXXXXXXXXXXXXXX 360
WNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDM
Sbjct: 301 WNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMVGGAGALLCVCGLLYG 360
Query: 361 XXWRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCALAQEVRTESLYHIDCETFYKKL 420
WRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCALAQEVRTESLYHIDCETFYKKL
Sbjct: 361 GYWRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCALAQEVRTESLYHIDCETFYKKL 420
Query: 421 PVVDDVEDEKRLPLLASHHVQFHEPPDTMIMAASEGSNDHVVIVHEEMVPPAXXXXXXXX 480
PVVDDVEDEKRLPLLASHHVQFHEPPDTMIMAASEGSNDHVVIVHEEMVPPA
Sbjct: 421 PVVDDVEDEKRLPLLASHHVQFHEPPDTMIMAASEGSNDHVVIVHEEMVPPAVQVVVEQV 480
Query: 481 XXXGDKSEEECSAVHDEKIMGSPLPESVVIVDDDEIPASLSDGSWTVEKVKRLINVVTLV 540
GDKSEEECSAVHDEKIMGSPLPESVVIVDDDEIPASLSDGSWTVEKVKRLINVVTLV
Sbjct: 481 VVEGDKSEEECSAVHDEKIMGSPLPESVVIVDDDEIPASLSDGSWTVEKVKRLINVVTLV 540
Query: 541 SLLILLYTRGFIR 553
SLLILLYTRGFIR
Sbjct: 541 SLLILLYTRGFIR 553
>Os01g0825900 Protein of unknown function Cys-rich family protein
Length = 525
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/367 (48%), Positives = 212/367 (57%), Gaps = 10/367 (2%)
Query: 69 INWSSVRSATKDWITNPMNIAMLLWLLCXXXXXXXXXXXXXXXXXXXFPTPAARNHWIEI 128
INWSSV S K+W+ +P+NIA+L WLLC FP+ R+HWIEI
Sbjct: 94 INWSSVFSFCKNWLKHPLNIALLAWLLCVAAAGGMLILLLLGLLNRAFPSKPLRHHWIEI 153
Query: 129 NNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGAGPRHGERXXXXXX 188
+NQ+LNALFTLMS+YQHP L HHL LLCRWRP DAA+LR Y K+G R GER
Sbjct: 154 DNQILNALFTLMSIYQHPSLIHHLVLLCRWRPEDAAELRKVYCKNG-DRRPGERAHMSVV 212
Query: 189 XXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXXXXXXXXXXXXXXCSPLGKDNYG 248
QYV+C LYW Y ++R E +N FF SPLG+D
Sbjct: 213 VALLHVTCISQYVVCNLYWAYRSRSRSEFADNFFFVLGVVAPVVAGAYTVYSPLGRDTDD 272
Query: 249 ELACPNAFDSVSQHKC------TGHAVVEPEWAGGMFDCGGDATAWWLSLSCTFCAFGWN 302
+ + A QH T VV+P WAGG+ DCG D A LS CTFC FGWN
Sbjct: 273 DASGEEA-KQQQQHMIEAELPGTRTVVVDPVWAGGLLDCGEDPAACCLSSLCTFCVFGWN 331
Query: 303 MERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMXXXXXXXXXXXXXXXXXX 362
MERLGFG+M+VHTA F+LLC AP WV ++ALHIHD + D
Sbjct: 332 MERLGFGNMYVHTAMFLLLCVAPFWVFNITALHIHDYDLSDAVGAAGIALCFLGLLYGGF 391
Query: 363 WRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCALAQEVRTESLYHID--CETFYKKL 420
WR+QMR+RF LP S CCGS S+TDYARWLFCWPCALAQEVRT +LY ++ FY+K
Sbjct: 392 WRVQMRKRFALPGSRWCCGSASLTDYARWLFCWPCALAQEVRTGNLYDVEDGGGVFYEKA 451
Query: 421 PVVDDVE 427
DVE
Sbjct: 452 MDGGDVE 458
>Os12g0109700 Protein of unknown function Cys-rich family protein
Length = 219
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/192 (84%), Positives = 167/192 (86%), Gaps = 5/192 (2%)
Query: 363 WRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCALAQEVRTESLYHIDCETFYKKLPV 422
WRIQMRERFGLPAS ACCGSPSVTDYARWLFCWPCALAQEVRT SLYHID ETFYKKLPV
Sbjct: 32 WRIQMRERFGLPASAACCGSPSVTDYARWLFCWPCALAQEVRTASLYHIDGETFYKKLPV 91
Query: 423 VDDVEDEKRLP-LLASHHVQFHEPPDTMIMAASEGSNDHVVIVHEEMVPPAXXXXXXXXX 481
VD EKR P LLASHHVQFHEPPDTMIMA SE S+DHVV+VHEEMVPPA
Sbjct: 92 VD---AEKRQPLLLASHHVQFHEPPDTMIMATSEESSDHVVVVHEEMVPPAVQVVFEQVV 148
Query: 482 XXGDKSEEECSAVHDEKIMGSPLPESVVIVDDDEIPASLSDGSWTVEKVKRLINVVTLVS 541
GDKSEEECSAVHDEKIMG PLPESV++V D EIPASLSDGSWTVEKVKRL+NVVTLVS
Sbjct: 149 VEGDKSEEECSAVHDEKIMGLPLPESVIVV-DAEIPASLSDGSWTVEKVKRLMNVVTLVS 207
Query: 542 LLILLYTRGFIR 553
LLILLYTRGFIR
Sbjct: 208 LLILLYTRGFIR 219
>Os11g0109600 Protein of unknown function Cys-rich family protein
Length = 1124
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 193/390 (49%), Gaps = 18/390 (4%)
Query: 48 LRQLKPWRRNAADDHLSAGI-AINWSSVRSATKDWITNPMNIAMLLWLLCXXXXXXXXXX 106
L L+ AA L A + +++W ++R+ W +PMN A+L+WL
Sbjct: 57 LASLRTTNNPAASRRLPAFVRSVDWRALRAKCLAWAKHPMNAALLIWLAFVAGGVAFVFL 116
Query: 107 XXXXXXXXXFPTPAARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADL 166
P + R W E+ NQ+LNALFT+M +YQHP LCHHL LL RWR AD A+L
Sbjct: 117 LMTGALNSAVPAASRRRRWTEVANQMLNALFTIMCVYQHPKLCHHLALLLRWRAADVAEL 176
Query: 167 RAAYFKDGAGPRHGERXXXXXXXXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXX 226
RA Y K+GA ER QY C L+W + + RP+L N
Sbjct: 177 RALYCKNGAAGLRRERLHVAAVVLLFHATCFAQYGYCALFWFFGRDNRPDLAVNLCMALG 236
Query: 227 XXXXXXXXXXXXCSPLGK-------------DNYGELACPNAFDSVSQHKCTGH--AVVE 271
PLG+ + ++ NA +Q + V +
Sbjct: 237 LGFPIVAALYMVYGPLGRKIVLIPASTDDEENLNSQVDEANAIAVTAQCDSNRNRAVVAK 296
Query: 272 PEWAGGMFDCGGDATAWWLSLSCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGV 331
PEWAGG+FD G D T LSLSCTFC FGWNMERLG G+M+VH TF LLC AP+ V V
Sbjct: 297 PEWAGGLFDVGDDPTVAALSLSCTFCVFGWNMERLGLGNMYVHVFTFALLCAAPVLVFAV 356
Query: 332 SALHIHDVVIGDMXXXXXXXXXXXXXXXXXXWRIQMRERFGLPAS--TACCGSPSVTDYA 389
+AL++HD + + WR QMR RFGLPA + C G + DY
Sbjct: 357 AALNVHDDTLRFVVGAAGALLSVLGLTYGGFWRAQMRRRFGLPAHRWSMCGGRATAADYG 416
Query: 390 RWLFCWPCALAQEVRTESLYHIDCETFYKK 419
+WL C PCALAQEVRT +LY ++ + Y K
Sbjct: 417 KWLCCAPCALAQEVRTANLYDVEEDVLYAK 446
>Os05g0341900
Length = 521
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/314 (43%), Positives = 165/314 (52%), Gaps = 15/314 (4%)
Query: 116 FPTPAARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGA 175
FP +ARN WIE+NNQVLNALFTLMS+YQHP L HH +L RWRP D LR AY +
Sbjct: 106 FPRKSARNRWIEVNNQVLNALFTLMSIYQHPALFHHAAMLLRWRPDDVKALRKAYRRRRK 165
Query: 176 GPRHG------ERXXXXXXXXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXXXXX 229
G ER QY +CGLYWGY++K RP+ E
Sbjct: 166 AAAAGDGAGGWERLHMSVVVALLHVACFAQYAMCGLYWGYSRKARPDAAETSLAVIGAAT 225
Query: 230 XXXXXXXXXCSPLGKDNYGELACPNAFDS---VSQHKCTGHAVVEPEWAGGMFDCGGDAT 286
PLG+ G + + VV EWAGG+ D G D T
Sbjct: 226 PALAGLYAYFGPLGRRKPGTATSARHQEEPDDLELAAAAAADVVVAEWAGGLLDVGDDPT 285
Query: 287 AWWLSLSCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMXX 346
AWWLS CTFC FGWNMER+G G+ VH TF LLCFAPLWV+ V+A++I D +GD
Sbjct: 286 AWWLSCLCTFCVFGWNMERMGLGNKHVHAVTFALLCFAPLWVLNVAAMNIRDEAVGDAVG 345
Query: 347 XXXXXXXXXXXXXXXXWRIQMRERFGL-----PASTACCGSP-SVTDYARWLFCWPCALA 400
WR +MR RFGL ACCGSP S+ DY RW+FCW CALA
Sbjct: 346 AVAVALCALGLLYGGYWRARMRRRFGLLPGRHGGGGACCGSPSSLADYLRWMFCWSCALA 405
Query: 401 QEVRTESLYHIDCE 414
QEVRT ++ +D +
Sbjct: 406 QEVRTANVLLLDAD 419
>Os03g0299800 Protein of unknown function Cys-rich family protein
Length = 610
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 178/379 (46%), Gaps = 34/379 (8%)
Query: 69 INWSSVRSATKDWITNPMNIAMLLWLLCXXXXXXXXXXXXXXXXXXXFPTPAARNHWIEI 128
I W + S W P N AM++WL P R W E+
Sbjct: 149 IKWGKLWSYAVSWCRKPENFAMIIWLAFVAAGLLMLFMLMTGMLDSAIPDDEQRKKWTEV 208
Query: 129 NNQVLNALFTLMSLYQHPVLCHHLFLLCRWRP---ADAADLRAAYFKDGAGPRHGERXXX 185
NQ+LNALFT+M LYQHP + HHL LL RWRP AD ++R Y KDGA PR +R
Sbjct: 209 INQILNALFTIMCLYQHPKIFHHLVLLLRWRPGAGADREEIRKVYCKDGA-PRPHDRAHM 267
Query: 186 XXXXXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXXXXXXXXXXXXXXCSPLGKD 245
QY C L+W Y +K RP+ N + PLG+
Sbjct: 268 LVVVVLLHATCLAQYFCCALFWSYARKERPDWALNIGYGLGTGCPVIAGLYAAYGPLGRK 327
Query: 246 NY------------GELACPNAFDSVSQHKCTGHAVV--EPEWAGGMFDCGGDATAWWLS 291
+ G P D + K VV PEW+GG+FDC D T LS
Sbjct: 328 QHEDSDEESAAAQAGGGNRPAENDREVEIKIYNRRVVVSSPEWSGGLFDCCDDGTVCALS 387
Query: 292 LSCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDVVIGDMXXXXXXX 351
+CTFC FGWNMERLGFG+M+VH TF+LLC AP + V+AL++HD I D
Sbjct: 388 ATCTFCVFGWNMERLGFGNMYVHAFTFILLCVAPFLIFSVTALNVHDDDIRDTVVSVGVL 447
Query: 352 XXXXXXXXXXXWRIQMRERFGLPAST--------------ACCGSPSVTDYARWLFCWPC 397
WR QMR+R+ LPAS AC +V+D A+WLFCW C
Sbjct: 448 LGLCGFLYGGFWRTQMRKRYKLPASGCGCGCECGAGGQGHAC--RAAVSDCAKWLFCWSC 505
Query: 398 ALAQEVRTESLYHIDCETF 416
ALAQEVRT + Y ++ + F
Sbjct: 506 ALAQEVRTANFYDVEDDRF 524
>Os05g0474900 Protein of unknown function Cys-rich family protein
Length = 554
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 183/405 (45%), Gaps = 31/405 (7%)
Query: 61 DHLSAGIAINWSSVRSATKDWITNPMNIAMLLWLLCXXXXXXXXXXXXXXXXXXXFPTPA 120
+H INW + KDWI P+N+A+ W+ C P+ +
Sbjct: 95 EHFQFIRKINWGHLWVMCKDWIKEPLNMALFAWIACVTVSGAILFLVMTGMLNRALPSKS 154
Query: 121 ARNHWIEINNQVLNALFTLMSLYQHPVLCHHLFLLCRWRPADAADLRAAYFKDGAGPRHG 180
R+ W E+NNQ+LNALFTLM LYQHP ++ LLCRW D LR Y K+G +
Sbjct: 155 QRDAWFEVNNQILNALFTLMCLYQHPKRIYYFVLLCRWEQKDVLVLRKTYCKNGTY-KPN 213
Query: 181 ERXXXXXXXXXXXXXXXCQYVLCGLYWGYTKKTRPELVENGFFXXXXXXXXXXXXXXXCS 240
E QY LCGL GY + RP + S
Sbjct: 214 EWMHMMVVVVLLNLNCFAQYALCGLNLGYRRSERPPIGVGLTISVAIGAAAFAGLYNIIS 273
Query: 241 PLGKDNYGELACPNAFDSVSQHKCTGHAVVE---------------------PEWAGGMF 279
PLGKD EL D +Q + T A PEW GG+
Sbjct: 274 PLGKDYDTELT---EVDQEAQTELTRPATSRTSLEKRYSFIQSEERRFVESRPEWVGGLM 330
Query: 280 DCGGDATAWWLSLSCTFCAFGWNMERLGFGSMFVHTATFVLLCFAPLWVMGVSALHIHDV 339
D + + +LS+ C+ C FGWNM+RLGFG+M+VH ATF+L C AP ++ ++A++I++
Sbjct: 331 DFWDNISLAYLSIFCSCCVFGWNMQRLGFGNMYVHIATFMLFCLAPFFIFNLAAVNINNE 390
Query: 340 VIGDMXXXXXXXXXXXXXXXXXXWRIQMRERFGLPASTACCGSPSVTDYARWLFCWPCAL 399
+ + WRIQMR+RF LPA+ CC S TD +WL C C+L
Sbjct: 391 NLREALGLTGLALCFFGLLYGGFWRIQMRKRFNLPANNFCCRSAEATDCFQWLCCSSCSL 450
Query: 400 AQEVRTESLYHIDCETFY------KKLPVVDDVEDEKRLPLLASH 438
AQEVRT Y I + Y + V+ + E LPL S+
Sbjct: 451 AQEVRTADYYDIAEDRSYTEQITARSQHVMTPLSREDGLPLFRSN 495
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.137 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,152,918
Number of extensions: 693503
Number of successful extensions: 1821
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1790
Number of HSP's successfully gapped: 8
Length of query: 553
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 447
Effective length of database: 11,501,117
Effective search space: 5140999299
Effective search space used: 5140999299
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 159 (65.9 bits)