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Os03g0299800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function Cys-rich family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0272) R2 : 0.702
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -2.62 (0.0836) R2dE : 0.723 R2E : 0.7
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0847 (0.0598) R2dN8 : 0.00191 R2N8 : -0.0203
σ : 0.503
deviance : 116.7
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C
peak time of C : --
E
wheather : temperature
threshold : 21.98
memory length : 47520
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
85.63 0.435 9.97 2.04 0.642 -0.96 -0.0393 2.05 0.515 16.2 29.19 4066 -- --
85.34 0.43 9.91 2.09 0.595 -1.42 0.106 -- 0.529 16.5 22.6 10421 -- --
85.64 0.431 9.97 2.04 0.643 -0.96 -- 2.04 0.514 16.2 29.1 4065 -- --
85.18 0.43 9.93 2.04 0.61 -1.49 -- -- 0.506 16.4 22.62 10421 -- --
100.68 0.47 9.93 2.4 -- -1.06 -- 2.17 0.575 -- 29.6 1838 -- --
111.87 0.496 9.84 3.03 0.59 -- 0.127 -- 0.89 16.5 -- -- -- --
111.91 0.495 9.84 3.03 0.59 -- -- -- 0.891 16.5 -- -- -- --
105.06 0.477 9.93 2.04 -- -1.45 -- -- 0.496 -- 22.5 10472 -- --
96.39 0.457 10.1 -- 0.614 -2.65 -- -- -0.0831 16.3 22.12 47520 -- --
130.53 0.534 9.84 3 -- -- -- -- 0.875 -- -- -- -- --
353.3 0.879 9.92 -- 0.534 -- -- -- 0.554 16.6 -- -- -- --
116.7 0.503 10.1 -- -- -2.62 -- -- -0.0847 -- 21.98 47520 -- --
368.47 0.896 9.91 -- -- -- -- -- 0.542 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.58 humidity 90 43200 < th dose dependent rect. 7 1
2 80.86 humidity 50 43200 > th dose dependent rect. 7 1
4 81.00 humidity 60 43200 > th dose independent rect. 7 2
5 81.04 wind 1 43200 > th dose dependent rect. 20 2
6 81.05 wind 9 43200 < th dose dependent rect. 20 2
10 81.33 humidity 70 43200 < th dose independent rect. 6 2
11 81.37 humidity 60 43200 < th dose independent rect. 19 16
12 81.41 humidity 50 43200 > th dose dependent rect. 6 3
15 81.44 wind 9 43200 > th dose dependent rect. 14 14
21 81.59 humidity 60 43200 > th dose independent rect. 18 16
29 81.71 humidity 60 43200 < th dose dependent rect. 19 16
32 81.73 humidity 70 43200 < th dose dependent rect. 7 2
33 81.75 wind 9 43200 > th dose dependent rect. 14 10
35 81.76 wind 7 43200 > th dose independent rect. 17 6
37 81.77 wind 9 43200 > th dose independent rect. 16 4
41 81.80 wind 7 43200 < th dose independent rect. 17 6
57 81.95 temperature 25 4320 < th dose dependent rect. 8 2
60 81.96 wind 9 43200 < th dose independent rect. 14 14
65 81.98 wind 9 43200 > th dose independent rect. 14 14
67 81.99 wind 5 43200 > th dose dependent rect. 17 6
70 82.01 humidity 60 43200 < th dose dependent rect. 7 4
89 82.11 humidity 60 43200 < th dose dependent rect. 9 2
109 82.22 wind 7 43200 > th dose independent rect. 18 2
110 82.22 humidity 60 43200 < th dose independent rect. 3 8
111 82.22 humidity 60 43200 < th dose independent rect. 1 10
117 82.25 radiation 20 43200 > th dose independent rect. 6 1
126 82.25 wind 9 43200 < th dose independent rect. 14 10
150 82.33 wind 5 43200 < th dose independent rect. 20 3
164 82.35 wind 7 43200 > th dose dependent rect. 17 2
170 82.39 humidity 60 43200 > th dose independent rect. 18 6
171 82.39 humidity 70 43200 < th dose dependent rect. 20 1
185 82.44 wind 9 43200 > th dose independent sin 15 NA
197 82.48 wind 9 43200 < th dose independent sin 15 NA
200 82.48 wind 5 43200 > th dose independent rect. 20 3
202 82.49 wind 9 43200 > th dose independent rect. 14 10
204 82.50 wind 7 43200 > th dose dependent sin 16 NA
284 82.78 humidity 60 43200 < th dose dependent sin 9 NA
286 82.78 wind 7 43200 > th dose dependent rect. 10 14
288 82.79 humidity 60 43200 < th dose independent rect. 18 6
306 82.83 humidity 60 43200 > th dose independent rect. 19 2
316 82.86 humidity 60 43200 > th dose independent rect. 1 10
331 82.89 wind 7 43200 > th dose dependent rect. 10 18
393 83.00 wind 7 43200 > th dose dependent rect. 13 18
423 83.06 wind 7 43200 > th dose independent rect. 10 15
440 83.09 wind 7 43200 > th dose independent rect. 8 16
441 83.09 wind 9 43200 < th dose independent rect. 10 18
448 83.10 humidity 90 43200 < th dose dependent rect. 19 2
483 83.16 humidity 60 43200 < th dose independent rect. 19 2
494 83.17 wind 7 43200 < th dose independent rect. 10 15
551 83.22 humidity 90 43200 < th dose dependent rect. 17 5
617 83.30 wind 1 43200 < th dose independent rect. 23 3
632 83.31 wind 9 43200 < th dose independent rect. 9 12
677 83.35 humidity 50 43200 < th dose dependent rect. 14 21
760 83.44 humidity 50 43200 < th dose dependent rect. 14 1
772 83.45 humidity 50 43200 < th dose independent rect. 14 22
773 83.45 humidity 50 43200 > th dose dependent rect. 19 2
777 83.45 humidity 50 43200 < th dose dependent rect. 14 18
792 83.47 humidity 80 43200 > th dose independent rect. 21 1
840 83.51 wind 9 43200 > th dose independent rect. 9 12
925 83.60 wind 1 43200 < th dose dependent rect. 11 18
956 83.63 humidity 50 43200 < th dose independent sin 9 NA
976 83.65 humidity 50 43200 < th dose dependent rect. 14 8
985 83.66 humidity 80 43200 < th dose independent rect. 21 1
992 83.67 humidity 50 43200 > th dose independent sin 9 NA