BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0577600 Os10g0577600|AK073475
         (871 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0577600  Similar to PLU-1 protein                           1716   0.0  
Os01g0907400  Transcription factor jumonji, JmjN domain cont...   238   1e-62
Os12g0279100  Transcription factor jumonji, JmjN domain cont...   231   3e-60
Os05g0196500  Transcription factor jumonji, JmjN domain cont...   227   3e-59
Os05g0302300  Transcription factor jumonji, JmjN domain cont...   221   1e-57
Os02g0696700  Similar to Jumonji domain containing protein 2...   146   7e-35
Os03g0151300  Similar to Early flowering 6                         93   1e-18
>Os10g0577600 Similar to PLU-1 protein
          Length = 871

 Score = 1716 bits (4444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 825/871 (94%), Positives = 825/871 (94%)

Query: 1   QGRGSSRWRAETPMQQVEGRNCLPAEVRIGLETLKRRRLERMRLTAQNNAGDGPPVPARS 60
           QGRGSSRWRAETPMQQVEGRNCLPAEVRIGLETLKRRRLERMRLTAQNNAGDGPPVPARS
Sbjct: 1   QGRGSSRWRAETPMQQVEGRNCLPAEVRIGLETLKRRRLERMRLTAQNNAGDGPPVPARS 60

Query: 61  GGDALRTPANCGVRLHANNGTALPSRTTQNKDPFAKRRVDKFDMSSLEWIDKIEECPVYY 120
           GGDALRTPANCGVRLHANNGTALPSRTTQNKDPFAKRRVDKFDMSSLEWIDKIEECPVYY
Sbjct: 61  GGDALRTPANCGVRLHANNGTALPSRTTQNKDPFAKRRVDKFDMSSLEWIDKIEECPVYY 120

Query: 121 PTKEEFEDPIGYIQKIAPVASKYGICKIXXXXXXXXXXXXXLMKEQPGFKFMTRVQPLRL 180
           PTKEEFEDPIGYIQKIAPVASKYGICKI             LMKEQPGFKFMTRVQPLRL
Sbjct: 121 PTKEEFEDPIGYIQKIAPVASKYGICKIVSPVSASVPAGVVLMKEQPGFKFMTRVQPLRL 180

Query: 181 AKWAEDDTVTFFMSERKYTFRDYEKMANKVFAKKYSSASCLPAKYVEEEFWREIAFGKMD 240
           AKWAEDDTVTFFMSERKYTFRDYEKMANKVFAKKYSSASCLPAKYVEEEFWREIAFGKMD
Sbjct: 181 AKWAEDDTVTFFMSERKYTFRDYEKMANKVFAKKYSSASCLPAKYVEEEFWREIAFGKMD 240

Query: 241 FVEYACDVDGSAFSSSPHDQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLF 300
           FVEYACDVDGSAFSSSPHDQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLF
Sbjct: 241 FVEYACDVDGSAFSSSPHDQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLF 300

Query: 301 SMFAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAF 360
           SMFAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAF
Sbjct: 301 SMFAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAF 360

Query: 361 DVLLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISD 420
           DVLLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISD
Sbjct: 361 DVLLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISD 420

Query: 421 WFPLGSVASRRYALLNRTPLLAHEELLCRSAVLLSHKLLNSDPKSLNKSEHPHSQRCLKS 480
           WFPLGSVASRRYALLNRTPLLAHEELLCRSAVLLSHKLLNSDPKSLNKSEHPHSQRCLKS
Sbjct: 421 WFPLGSVASRRYALLNRTPLLAHEELLCRSAVLLSHKLLNSDPKSLNKSEHPHSQRCLKS 480

Query: 481 CFVQLMRFQRNTRGLLAKMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCGCNFDPVCLHH 540
           CFVQLMRFQRNTRGLLAKMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCGCNFDPVCLHH
Sbjct: 481 CFVQLMRFQRNTRGLLAKMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCGCNFDPVCLHH 540

Query: 541 EQELRSCPCKSNQVVYVREDIQELEALSRKFEKDICLDKEISGFDSYKQAEKNEPFFEIT 600
           EQELRSCPCKSNQVVYVREDIQELEALSRKFEKDICLDKEISGFDSYKQAEKNEPFFEIT
Sbjct: 541 EQELRSCPCKSNQVVYVREDIQELEALSRKFEKDICLDKEISGFDSYKQAEKNEPFFEIT 600

Query: 601 RNLRNTEVNLIEDXXXXXXXXXXXXXXXXXXXLTSFAQHDVPVLAEAIVCANQADQLYST 660
           RNLRNTEVNLIED                   LTSFAQHDVPVLAEAIVCANQADQLYST
Sbjct: 601 RNLRNTEVNLIEDAFSGATAADAAKSSPATSTLTSFAQHDVPVLAEAIVCANQADQLYST 660

Query: 661 TEQTISSPLVKGTDAVGANSSSMADANNGTGSCNASAVEYSGNSDSESEIFRVKRRSGVS 720
           TEQTISSPLVKGTDAVGANSSSMADANNGTGSCNASAVEYSGNSDSESEIFRVKRRSGVS
Sbjct: 661 TEQTISSPLVKGTDAVGANSSSMADANNGTGSCNASAVEYSGNSDSESEIFRVKRRSGVS 720

Query: 721 VKPASDAKTSNLSDQQVLRRLKKVRPEIQQHNKRPEDYGHCSVPSGRMSMKNLNSSSSCG 780
           VKPASDAKTSNLSDQQVLRRLKKVRPEIQQHNKRPEDYGHCSVPSGRMSMKNLNSSSSCG
Sbjct: 721 VKPASDAKTSNLSDQQVLRRLKKVRPEIQQHNKRPEDYGHCSVPSGRMSMKNLNSSSSCG 780

Query: 781 EEHWRMKRRQLETQQDEXXXXXXXXXXXXXXTSYSFRGEFVEMSRDAAAEVRPKRLKIRL 840
           EEHWRMKRRQLETQQDE              TSYSFRGEFVEMSRDAAAEVRPKRLKIRL
Sbjct: 781 EEHWRMKRRQLETQQDESSYSAKQKSYSYPSTSYSFRGEFVEMSRDAAAEVRPKRLKIRL 840

Query: 841 PSSSTNRVVEQGSSGQRFTRDDKSLGCWPAI 871
           PSSSTNRVVEQGSSGQRFTRDDKSLGCWPAI
Sbjct: 841 PSSSTNRVVEQGSSGQRFTRDDKSLGCWPAI 871
>Os01g0907400 Transcription factor jumonji, JmjN domain containing protein
          Length = 1286

 Score =  238 bits (608), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 186/369 (50%), Gaps = 35/369 (9%)

Query: 109 WIDKIEECPVYYPTKEEFEDPIGYIQKIAPVASKYGICKIXXXXXXXXXXXX-------- 160
           W+  +   P + PT  EF DP+ YI KI P A+ YGICK+                    
Sbjct: 18  WLRSLPVAPEFRPTAAEFADPVSYILKIEPAAAPYGICKVVPPLPPPPKKATFSNLSRSF 77

Query: 161 -XLMKEQPGFKFMTRVQPLRLA-KWAEDDTVTFFMSERKYTFRDYEKMANK-----VFAK 213
             L  +     F TR Q + L  +         + S  +YT   +E  A       +   
Sbjct: 78  AALHPDDRSPSFPTRHQQVGLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGL 137

Query: 214 KYSSASCLPAKYVEEEFWREIAFGKMDFVEYACDVDGSAFS---------------SSPH 258
            + ++  L     E  FWR  A  +   VEY  D+ GS FS               +   
Sbjct: 138 NFPASRQLTPLDHEVLFWRASA-DRPIVVEYGSDMSGSGFSPCAAQPQPPPQQQPTARAA 196

Query: 259 DQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYH 318
             LG++ WN++  +R   S+LR +   +PGVT PMLY+GM+FS FAWHVEDH L+S+NY 
Sbjct: 197 AHLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYM 256

Query: 319 HCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDVLLGKTTMFPPNVLLDH 378
           H GA KTWYG+P DAA  FE V  +  Y  ++   E     F  L  KTT+  P VL++ 
Sbjct: 257 HLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLE----TFATLGQKTTVMSPEVLVES 312

Query: 379 NVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYALLNRT 438
            +P  + VQ  GEFV+TFP SYH GFSHGFNCGEA N A  +W  +   A+ R A +NR 
Sbjct: 313 GIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRP 372

Query: 439 PLLAHEELL 447
           P+++H +LL
Sbjct: 373 PMVSHYQLL 381
>Os12g0279100 Transcription factor jumonji, JmjN domain containing protein
          Length = 1366

 Score =  231 bits (588), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/367 (37%), Positives = 184/367 (50%), Gaps = 25/367 (6%)

Query: 108 EWIDKIEECPVYYPTKEEFEDPIGYIQKIAPVASKYGICKI-----------XXXXXXXX 156
           EW+  +   P Y+PT  EF DPI YI +I P AS+YGICKI                   
Sbjct: 12  EWLRTLPVAPEYHPTLAEFADPIAYILRIEPEASRYGICKIVPPLPRPPEDDTFRRLQAA 71

Query: 157 XXXXXLMKEQPGFKFMTRVQPLRLAKWAEDDTVT-FFMSERKYTFRDYEKMANKVFAKKY 215
                     P   F TR+Q + L+           + S  +YT   +   A +    ++
Sbjct: 72  FAAAASSNGDPSPTFPTRLQQVGLSARNRRAASRRVWESGERYTLEAFRAKAAEFEPPRH 131

Query: 216 SSASCLPAKY-VEEEFWREIAFGKMDFVEYACDVDGSAFSS-------SPHDQLGKSNWN 267
           ++    P    +E  FW   A      VEY  D+ GS F+S       +    +G++ WN
Sbjct: 132 AAPPRNPTHLQLEALFWAACASRPFS-VEYGNDMPGSGFASPDELPDAANATDVGETEWN 190

Query: 268 LKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAFKTWY 327
           ++   R   S+LR +   + GVT PMLY+ ML+S FAWHVEDH L+S+N+ H G  KTWY
Sbjct: 191 MRVAPRARGSLLRAMARDVAGVTTPMLYVAMLYSWFAWHVEDHELHSLNFLHFGKAKTWY 250

Query: 328 GIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDVLLGKTTMFPPNVLLDHNVPVYKAVQ 387
           G+P DA   FE+      Y  D+        AF  L  KTT+  P VLL   VP  + VQ
Sbjct: 251 GVPRDAMLAFEETVRVHGYADDL----NAIMAFQTLNEKTTVLSPEVLLSAGVPCCRLVQ 306

Query: 388 KPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYALLNRTPLLAHEELL 447
           K GEFVITFP +YH+GFSHGFNCGEA N A   W  +   A+ R A  N  P+++H +LL
Sbjct: 307 KAGEFVITFPGAYHSGFSHGFNCGEASNIATPHWLQVAKEAAIRRASTNCGPMVSHYQLL 366

Query: 448 CRSAVLL 454
              A+ L
Sbjct: 367 YELALSL 373
>Os05g0196500 Transcription factor jumonji, JmjN domain containing protein
          Length = 1238

 Score =  227 bits (579), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 167/520 (32%), Positives = 243/520 (46%), Gaps = 78/520 (15%)

Query: 113 IEECPVYYPTKEEFEDPIGYIQKIAPVASKYGICKIXXXXXXXXXXXXXLMKEQPGFKFM 172
           ++E PV+YPT+EEFED + YI+ I P+A  YGIC+I                   G KF 
Sbjct: 151 LDEAPVFYPTEEEFEDTLKYIESIRPMAEPYGICRIVPPSSWKPPCLLKDKSIWEGSKFS 210

Query: 173 TRVQPL---------------------RLAKWAEDDTVTF-------------FMSERKY 198
           TRVQ +                     +LA+  E+                  F    ++
Sbjct: 211 TRVQKVDKLQNRKSSKKGRRGGMMKRRKLAESEENSATAHTQTGMQQSPERFGFEPGPEF 270

Query: 199 TFRDYEKMAN---KVFAKKYSSASCLPA-KYVEEEFWREIAFGKMDF-VEYACDVDGSAF 253
           T + ++K A+   K + +K +S   +P+ + +E E+WR +     +  V Y  D++   F
Sbjct: 271 TLQTFQKYADDFSKQYFRKDTSMDSVPSVEDIEGEYWRIVEVPTEEIEVIYGADLETGTF 330

Query: 254 SS-----SPH------DQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSM 302
            S     SP       D+  +S WNL N  RL  SVL      I GV  P +Y+GM FS 
Sbjct: 331 GSGFPKLSPETKSDAEDKYAQSGWNLNNLPRLQGSVLSFEGGDISGVLVPWVYVGMCFSS 390

Query: 303 FAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDV 362
           F WHVEDH+LYS+NY H GA K WYG+PG  A   E    +        + E  +   D+
Sbjct: 391 FCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKH-------LPELFEEQPDL 443

Query: 363 LLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWF 422
           L    T F P++L    V VY+ VQ  GEFV+TFPR+YHAGF+ GFNC EAVN A  DW 
Sbjct: 444 LHNLVTQFSPSLLKSEGVHVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVAPIDWL 503

Query: 423 PLGSVASRRYALLNRTPLLAHEELL---CRSAVLLSHKLL----NSDPKSLNKSEHPHSQ 475
           P+G  A   Y    R   ++H++LL    R A+     +L    N+      KS      
Sbjct: 504 PIGHNAVELYREQARKITISHDKLLLGAAREAIRAQWDILFLKRNTADNMRWKSICGADS 563

Query: 476 RCLKS--CFVQLMRFQRNTRGLLA---KMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCG 530
              K+    ++    QR T G+ A   KM ++     +      C++C  D +++   C 
Sbjct: 564 TIFKALKARIETELVQRKTLGVPAQSRKMDAEFDSIDR-----ECALCYYDLHLSASGCP 618

Query: 531 CNFDP-VCLHHEQELRSCPCKSNQVVYV-REDIQELEALS 568
           C  +   CL H ++L  C C  ++  ++ R D+ EL  L+
Sbjct: 619 CCPEKYACLVHAKQL--CSCDWDKRFFLFRYDVNELNILA 656
>Os05g0302300 Transcription factor jumonji, JmjN domain containing protein
          Length = 971

 Score =  221 bits (564), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 177/540 (32%), Positives = 241/540 (44%), Gaps = 90/540 (16%)

Query: 112 KIEECPVYYPTKEEFEDPIGYIQKIAPVASKYGICKIXXXXXXXXXXXXXLMKEQPGFKF 171
           +I++ PV+ PT+EEF+DPI YI  I P A KYGIC+I                     +F
Sbjct: 72  EIDDAPVFTPTEEEFKDPIRYITSIRPQAEKYGICRIVPPSSWRPPCSLKEKNFWECTEF 131

Query: 172 MTRVQ---------------------------PLRL--------AKWAED----DTVTFF 192
            TRVQ                            LR         A  +ED    D    F
Sbjct: 132 NTRVQQVDKLQNREPTKKKSQPRVQKKRKRRKRLRFGMTHRRPSANTSEDCADADEKFGF 191

Query: 193 MSERKYTFRDYEKMANKVFAKKY---SSASCLP--------------AKYVEEEFWREIA 235
            S   +T  +++K A++ F ++Y     +  +P                 +E E+WR I 
Sbjct: 192 QSGSDFTLDEFQKYADE-FKQQYFGIKGSDEIPLSEIKKKKKNWQPSVDEIEGEYWR-IV 249

Query: 236 FGKMDFVE--YACDVDGSAFSS---------SPHDQLGKSNWNLKNFSRLSNSVLRLLQT 284
               D VE  Y  D+D S FSS         +  D  G S WNL N  R+  SVL     
Sbjct: 250 VCPTDEVEVDYGADLDTSMFSSGFSKLSSDSNRRDPYGLSCWNLNNLPRIPGSVLSFETE 309

Query: 285 PIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQF 344
            I GV  P LY+GM FS F WHVEDH+LYS+NY H G  K WYG+PG  A   E+   + 
Sbjct: 310 DISGVVVPWLYVGMCFSSFCWHVEDHFLYSMNYMHFGEPKVWYGVPGADAVKLEEAMRK- 368

Query: 345 VYNKDILVGEGEDAAFDVLLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGF 404
             N   L  E  D   +++    T   P+VL    VPVY+ VQ PGEFV+T PR+YH+GF
Sbjct: 369 --NLPRLFEEQPDLLHELV----TQLSPSVLKSEGVPVYRVVQNPGEFVLTLPRAYHSGF 422

Query: 405 SHGFNCGEAVNFAISDWFPLGSVASRRYALLNRTPLLAHEELLCRSAVLLSHKL-LN-SD 462
           + GFNC EAVN A  DW P G  A   Y    R   ++H++LL ++A     +L +N SD
Sbjct: 423 NCGFNCAEAVNVAPVDWLPHGQCAVELYREQRRKTSISHDKLLLKTANEAVRQLWMNLSD 482

Query: 463 PKSLNKSEHPHSQRC-----LKSCFVQLMRFQRNTRGLLAKMGSQIHYKPKTY--PNLSC 515
            KS  +  +     C     L S     ++ ++  RG    M  +       Y   +  C
Sbjct: 483 CKS-EQGVYRWQDTCGKDGMLTSAIKTRVKMEKAARG--GNMALRYKKMDGDYDSADREC 539

Query: 516 SMCRRDCYITHVLCGCNFDP-VCLHHEQELRSCPCKSNQVVYVREDIQELEALSRKFEKD 574
             C  D +++ V C C+ +   CL+H   L SC     +   +R  I+EL  L    E D
Sbjct: 540 FSCFYDLHLSAVSCQCSPNRFACLNHANILCSCE-MDRKTALLRYTIEELHTLVAALEGD 598
>Os02g0696700 Similar to Jumonji domain containing protein 2C (Gene amplified in
           squamous cell carcinoma 1 protein) (GASC-1 protein)
          Length = 387

 Score =  146 bits (368), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 148/293 (50%), Gaps = 24/293 (8%)

Query: 478 LKSCFVQLMRFQRNTRGLLAKMGSQIHYKPKTYPNLSCSMCRRDCYITHVLCGCNFDPVC 537
           +K  FVQLMR Q   R  L KMG++ HYK      + C +CRRDCY+ H++C C  D +C
Sbjct: 1   MKVPFVQLMRVQHRIRWSLMKMGARTHYKADIDATVLCGICRRDCYVAHIMCNCRIDAIC 60

Query: 538 LHHEQELRSCPCKSNQVVYVREDIQELEALSRKFEKDI-CLDKEISGFDSYKQAEKNEPF 596
           L HE+E+R CPC  ++VV+VR+DI ELE LS+KFE++   LD           A ++  F
Sbjct: 61  LCHEEEIRRCPCSCDRVVFVRKDIFELETLSKKFEEESGILDAVKKQMARRDGASQHSNF 120

Query: 597 FEITRNLRN--TEVNLIEDXXXXXXXXXXXXXXXXXXXLTSFAQHDV--PVLAEAIVC-- 650
           F+ T +        N+  D                    T+F  +D+  P  A + V   
Sbjct: 121 FDCTDHEAEYYPYCNIHIDPSPEIYSISE----------TNFVGYDLNNPHPAASTVTFS 170

Query: 651 ------ANQADQLYSTTEQTISSPLVKGTDAVGANSSSMADANNGTGSCNASAVEYSGNS 704
                 + Q+D+  S+  + +SS  ++ T       S+    +    +C +  +      
Sbjct: 171 FVPHEYSTQSDECTSSNRRALSSSCLENTITPENAISNACQLSTPDQTCLSDKLAAHDTD 230

Query: 705 DSESEIFRVKRRSGVS-VKPASDAKTSNLSDQQVLRRLKKVRPEIQQHNKRPE 756
           DS+ EIFRVKRRSG++  K   +  T+N +  QVL+RLKK+    +Q +K PE
Sbjct: 231 DSDCEIFRVKRRSGLTPEKRHMEDGTTNFTGNQVLKRLKKINAHDRQEHKLPE 283
>Os03g0151300 Similar to Early flowering 6
          Length = 118

 Score = 92.8 bits (229), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 4/81 (4%)

Query: 386 VQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYALLNRTPLLAHEE 445
           VQ PGEFV+TFPR+YH GFSHGFNCGEA NFA   W      A+ R A++N  P+L+H++
Sbjct: 2   VQYPGEFVVTFPRAYHVGFSHGFNCGEAANFATPQWLKFAKEAAVRRAVMNYLPMLSHQQ 61

Query: 446 LLCRSAVLLSHKLLNSDPKSL 466
           LL     LL+   ++ +P+ L
Sbjct: 62  LL----YLLAVSFISRNPREL 78
  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.133    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,518,778
Number of extensions: 1253582
Number of successful extensions: 3040
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3032
Number of HSP's successfully gapped: 7
Length of query: 871
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 761
Effective length of database: 11,292,261
Effective search space: 8593410621
Effective search space used: 8593410621
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)