BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0545000 Os10g0545000|AK069472
(343 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0545000 Mg2+ transporter protein, CorA-like family pro... 675 0.0
Os03g0137700 Mg2+ transporter protein, CorA-like family pro... 323 1e-88
Os06g0650800 Similar to MRS2-5 221 4e-58
Os01g0869200 Mg2+ transporter protein, CorA-like family pro... 197 9e-51
Os01g0908500 Mg2+ transporter protein, CorA-like family pro... 187 8e-48
Os04g0430900 182 4e-46
Os03g0742400 Similar to MRS2-7 174 1e-43
Os04g0501100 Similar to MRS2-5 160 2e-39
>Os10g0545000 Mg2+ transporter protein, CorA-like family protein
Length = 343
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/343 (95%), Positives = 329/343 (95%)
Query: 1 MFNCAAREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQP 60
MFNCAAREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQP
Sbjct: 1 MFNCAAREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQP 60
Query: 61 GGDDHGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRAT 120
GGDDHGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRAT
Sbjct: 61 GGDDHGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRAT 120
Query: 121 PVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQ 180
PVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQ
Sbjct: 121 PVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQ 180
Query: 181 NQQVEALISSAASNSIVPGGTXXXXXXXXXXXXXXIATSMHLDNDVEDLEMLLEAYFMQL 240
NQQVEALISSAASNSIVPGGT IATSMHLDNDVEDLEMLLEAYFMQL
Sbjct: 181 NQQVEALISSAASNSIVPGGTSLSRLNNSFRRSVSIATSMHLDNDVEDLEMLLEAYFMQL 240
Query: 241 DGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNI 300
DGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNI
Sbjct: 241 DGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNI 300
Query: 301 QSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLLGP 343
QSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLLGP
Sbjct: 301 QSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLLGP 343
>Os03g0137700 Mg2+ transporter protein, CorA-like family protein
Length = 435
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/336 (54%), Positives = 220/336 (65%), Gaps = 11/336 (3%)
Query: 6 AREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDDH 65
AREKAMVINLEF+RAIVTADE+L+L+PL +V+PFVE+L H PLK+L + H
Sbjct: 109 AREKAMVINLEFVRAIVTADEVLVLEPLAQEVLPFVEKLRKHFPLKSLDVDD--VSTHMH 166
Query: 66 GEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLEE 125
E D V E GA HELPFEFQVL+ ALE VC S++ +S L R A VL++
Sbjct: 167 TENQDGELAQDVS-CYEVEGANHELPFEFQVLDFALEAVCLSYNSTISDLNRSAIAVLDD 225
Query: 126 LTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQQVE 185
L K+VSTRNL+RV +LKS LTRLLA VQKVRDE+EH+LDDNE MAHL RK + +
Sbjct: 226 LMKSVSTRNLERVWSLKSSLTRLLASVQKVRDEVEHILDDNEAMAHLCTARKTKGQKDL- 284
Query: 186 ALISSAASNSIVPGGTXXXXXXXXXXXXXXIATSMHLDNDVEDLEMLLEAYFMQLDGIRN 245
N+I+ T I T + D+D L+MLLEAYF QLDGIRN
Sbjct: 285 -------LNTILFPETRLCRTHSSIENSTGIRTCVPSDSDAHILDMLLEAYFKQLDGIRN 337
Query: 246 RILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNIQSKLY 305
RI VR+YI DTEDY++IQLDN+RNEL+ LQLTL IASFGIA+NTFIA AFAMNI + Y
Sbjct: 338 RIFLVRQYIVDTEDYISIQLDNKRNELLGLQLTLIIASFGIAINTFIAAAFAMNIPHRGY 397
Query: 306 SIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
G F FVG TS C I I+L YA +LL
Sbjct: 398 HFVIGVPFGQFVGATSFLCMSIVILLFTYAWRNRLL 433
>Os06g0650800 Similar to MRS2-5
Length = 436
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/354 (38%), Positives = 194/354 (54%), Gaps = 53/354 (14%)
Query: 6 AREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDDH 65
RE+A+V+NLE IR ++TADE+LLL+ L V+ + +L L
Sbjct: 116 GRERAIVVNLEQIRCVITADEVLLLNSLDSYVLQYAAELQRRL----------------- 158
Query: 66 GEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLEE 125
L A G ELPFEF+ LELALE CS D + LE A P+L+E
Sbjct: 159 --------------LQRAEG--DELPFEFRALELALEAACSFLDAQAAELEIEAYPLLDE 202
Query: 126 LTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQ--- 182
LT +ST NL+RVR LKS L L VQKVRDEIE L+DD+ DMA +YL+ K+L+ +
Sbjct: 203 LTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLSEKKLRTEASF 262
Query: 183 ----------QVEALISSAASNSIVPGGTXXXXXXXXXXXXXXIATSMHLDND-----VE 227
V S +A S V T S+ ++ ++
Sbjct: 263 YGDQSMLGYNSVGDGTSFSAPVSPVSSPTESRKLEKAFSLCRSRHDSVKSSDNTATEHIQ 322
Query: 228 DLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIA 287
+LEMLLEAYF+ +D N++ S++EYIDDTED++NIQLDN RN+LIQ +L LT A+F +A
Sbjct: 323 ELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVA 382
Query: 288 VNTFIAGAFAMNIQSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
+ +AG F MN ++ ++SI + +F W + G F+ C LW+ ++K+L+
Sbjct: 383 IFGVVAGIFGMNFETSVFSIQN-AFQWVLIITGVIGAFIFC-GFLWFFKYKRLM 434
>Os01g0869200 Mg2+ transporter protein, CorA-like family protein
Length = 418
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 185/347 (53%), Gaps = 13/347 (3%)
Query: 6 AREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDDH 65
R++A+V+ L+ ++AI+TA E+L+ D + + F+ L L L + + P D
Sbjct: 73 GRDRAIVVRLQGVKAIITATEVLVPDHDDVLLASFLLDLRSRLSLPD-AAPSTNPAAADR 131
Query: 66 GEKHDDSHGDQVPRLNEATGAEHELP-FEFQVLELALETVCSSFDVNVSGLERRATPVLE 124
G + VP L + ++P FEF+VLE+ LE C + LE+ A P L+
Sbjct: 132 GNGTEQGDQGSVPGLAISGAGNAKIPPFEFKVLEVCLEHACKDLESQTRSLEKEAYPALD 191
Query: 125 ELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQQV 184
+L VST NLD VR LKS + L VQK+RDE+EHLLDD+ DM+ +YLTRK L Q +
Sbjct: 192 KLGSKVSTLNLDHVRNLKSRMVDLSGRVQKIRDELEHLLDDDMDMSEMYLTRK-LSFQGL 250
Query: 185 EALISSAASNSI--VPGGTXXXXXXXXXXXXXXIATSMHLDNDVEDLEMLLEAYFMQLDG 242
+S A S+ V +S+++ D+E+LEMLLEAYF+Q+DG
Sbjct: 251 SGSLSRADSHKYASVDHDDDREEEDHDDETESGRESSVYVKPDIEELEMLLEAYFVQIDG 310
Query: 243 IRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNIQS 302
N + +REY DDTEDY+NI LD ++N+L+Q+ + LT A+ + + F MNI
Sbjct: 311 TLNTLYHIREYADDTEDYINIMLDEKQNQLLQMGVMLTTATVVVTAGIVVVSLFGMNIHI 370
Query: 303 KLYSIDDGS--------FFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
L + FW GT +GC I ++ ++ R K+L
Sbjct: 371 DLMKDPETPEMVRMSNMHFWETTFGTVAGCIAIYLLAIYAGRKSKIL 417
>Os01g0908500 Mg2+ transporter protein, CorA-like family protein
Length = 314
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 157/282 (55%), Gaps = 17/282 (6%)
Query: 72 SHGDQVPRLNEAT-GAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLEELTKNV 130
+H + +P L A G LPFEF+ LE+ LE+ C S + S LE+ A P L+ELT +
Sbjct: 37 THSNSMPTLTAAKDGNTKVLPFEFRALEVCLESACRSLEEETSTLEQEAYPALDELTSKI 96
Query: 131 STRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQQVEALISS 190
ST NL+RVR +KS L + VQKVRDE+EHLLDD DMA +YLT K L Q+ IS
Sbjct: 97 STLNLERVRQIKSRLVAISGRVQKVRDELEHLLDDEMDMAEMYLTEK-LTRQE----ISE 151
Query: 191 AASNSIVPGGTXXXX---XXXXXXXXXXIATSMHLDNDVEDLEMLLEAYFMQLDGIRNRI 247
+S V + T + +E+LEMLLEAYF+Q+DG N++
Sbjct: 152 TSSRVEVDDPSQLEVDRDEDYRSEADVSNGTFIGYKPHIEELEMLLEAYFVQIDGTLNKL 211
Query: 248 LSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIAVNTFIAGAFAMNIQSKLYSI 307
+REY+DDTEDY+NI LD+++N+L+Q+ + L+ A+ I + G F MNI LY+
Sbjct: 212 SHLREYVDDTEDYINIMLDDKQNQLLQMGVMLSTATVVITAGVAVVGLFGMNIGISLYAD 271
Query: 308 DDGS--------FFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
FW GT +GC ++ IV + + + LL
Sbjct: 272 PTNEEEKRASNMKFWETTLGTIAGCTVMYIVAMGWGKRSGLL 313
>Os04g0430900
Length = 434
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 167/330 (50%), Gaps = 24/330 (7%)
Query: 6 AREKAMVINLEFIRAIVTADEILLLDPLTIDVIPFVEQLTHHLPLKNLVC---------- 55
R++A+V+NL+ RA++TA E+L+ P V P V +L L L
Sbjct: 81 GRDRAVVVNLDRARAVITASEVLVPSPRDPAVAPLVRELRARLALAASPTPAPSPSPPQH 140
Query: 56 -------GNGQPGGDDHGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSF 108
G+ P G + +G L G + LPFEF+ LE+ LE C S
Sbjct: 141 GMAVGMDGSISPSQASRGGEEAAGNGKDGEALG---GGDKALPFEFRALEVCLEFACKSL 197
Query: 109 DVNVSGLERRATPVLEELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNED 168
+ LE+ A P L+ELT VST NL+RVR +KS L + VQKVRDE+EHLLDD+ D
Sbjct: 198 EHETCTLEKEAYPALDELTSKVSTLNLERVRQIKSRLVAISGKVQKVRDELEHLLDDDMD 257
Query: 169 MAHLYLTRKQLQNQQVEALISSAAS---NSIVPGGTXXXXXXXXXXXXXXIATSMHLDND 225
MA L+LT K L Q I AS + IA +
Sbjct: 258 MAALHLTEK-LAYQSSRFDIDKEASELEDHSSRDEEGVEGGGGGDGDDETIAGGGSFSPN 316
Query: 226 VEDLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFG 285
++LE+LLE+YF+Q+DG N + ++REY++DTEDY+N+ LD ++N+L+Q+ + L+ +
Sbjct: 317 TDELEILLESYFVQIDGTLNSLSTLREYVEDTEDYINMMLDEKQNQLLQMGILLSTGTLV 376
Query: 286 IAVNTFIAGAFAMNIQSKLYSIDDGSFFWP 315
+ + G F +N+ LY S +P
Sbjct: 377 SSCAIAVTGVFGINVHISLYDSPASSAAFP 406
>Os03g0742400 Similar to MRS2-7
Length = 249
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/255 (45%), Positives = 160/255 (62%), Gaps = 11/255 (4%)
Query: 91 PFEFQVLELALETVCSSFDVNVSGLERRATPVLEELTKNVSTRNLDRVRTLKSDLTRLLA 150
PFEF+ LE+ LE +CS + LE A P L+ELT +S+RNLDRVR LKS +TRL A
Sbjct: 2 PFEFRALEVTLEAICSFLGARTTELESAAYPALDELTSKISSRNLDRVRKLKSGMTRLNA 61
Query: 151 HVQKVRDEIEHLLDDNEDMAHLYLTRKQLQNQQVEALISSAASNSIVPGGTXXXXXXXXX 210
VQKVRDE+E LLDD++DMA LYL+RK + +S + + P
Sbjct: 62 RVQKVRDELEQLLDDDDDMADLYLSRKL---AGAASPVSGSGGPNWFPASPTIGSKISRA 118
Query: 211 XXXXXIATSMHL-DNDVEDLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQR 269
A ++H +NDVE+LEMLLEAYFMQ+DG N++ ++REYIDDTEDY+NIQLDN R
Sbjct: 119 SRAS--APTIHGNENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHR 176
Query: 270 NELIQLQLTLTIASFGIAVNTFIAGAFAMNIQSKLYSIDD--GSFFWPFVGGTSSGCFMI 327
N+LIQL+L L+ + +++ + +AG F MNI Y+ +D G F V + C +
Sbjct: 177 NQLIQLELFLSSGTVCLSLYSLVAGIFGMNIP---YTWNDNHGYVFKWVVLVSGLFCAFM 233
Query: 328 CIVLLWYARWKKLLG 342
+ ++ YAR K L+G
Sbjct: 234 FVSIVAYARHKGLVG 248
>Os04g0501100 Similar to MRS2-5
Length = 412
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 168/354 (47%), Gaps = 63/354 (17%)
Query: 6 AREKAMVINLEFIRAIVTADEILLL-DPLTIDVIPFVEQLTHHLPLKNLVCGNGQPGGDD 64
RE+A+V NLE IR I+TADE L+L DP DV GG
Sbjct: 102 GRERAVVCNLERIRCIITADEALILRDP---DVA----------------------GGGA 136
Query: 65 HGEKHDDSHGDQVPRLNEATGAEHELPFEFQVLELALETVCSSFDVNVSGLERRATPVLE 124
E+ + ++ R +LPFEF LE+ALE CS D LE A P+L+
Sbjct: 137 ETEEAVRRYVAELQR--RLVDRADDLPFEFIALEVALEAACSFLDAQAVELEADAYPLLD 194
Query: 125 ELTKNVSTRNLDRVRTLKSDLTRLLAHVQKVRDEIEHLLDDNEDMAHLYLTRKQ------ 178
ELT +ST NL+RVR LKS L L VQKVRDEIE L+DD+ DMA +YLT K+
Sbjct: 195 ELTTKISTLNLERVRRLKSKLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMEAS 254
Query: 179 -LQNQQVEALISS--AASNSIVPGGTXXXXXXXXXXXXXXIATSMH--------LDNDVE 227
L+ Q + + +S +S S A S H +E
Sbjct: 255 LLEEQAFQGMGNSGFGSSFSAPVSPVSSPPASRRLEKELSFARSRHDSFKSADSSQYSIE 314
Query: 228 DLEMLLEAYFMQLDGIRNRILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFGIA 287
+LEMLLEAYF+ +D +++ S DN RN+LIQ +L LT A+F +A
Sbjct: 315 ELEMLLEAYFVVIDYTLSKLTS----------------DNVRNQLIQFELLLTTATFVVA 358
Query: 288 VNTFIAGAFAMNIQSKLYSIDDGSFFWPFVGGTSSGCFMICIVLLWYARWKKLL 341
+ ++G F MN + L+++ +F W V G + C +WY + ++
Sbjct: 359 IFGVVSGVFGMNFEVDLFNVPH-AFEWTLVITGVCGLVIFC-CFIWYFKKRRFF 410
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,749,016
Number of extensions: 435837
Number of successful extensions: 1367
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 1354
Number of HSP's successfully gapped: 10
Length of query: 343
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 241
Effective length of database: 11,709,973
Effective search space: 2822103493
Effective search space used: 2822103493
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)