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Os06g0650800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MRS2-5.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.84 (0.014) R2 : 0.56
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.881 (0.0367) R2dC : 0.559 R2C : 0.551
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0787 (0.0295) R2dN8 : 0.00888 R2N8 : 0.0014
σ : 0.264
deviance : 31.89
__
_____
C
peak time of C : 6.14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.33 0.246 9.74 0.865 0.859 -0.135 0.0052 3.33 0.0903 6.18 26 3191 -- --
29.11 0.251 9.83 0.0734 0.869 0.255 -0.0225 -- -0.0358 6.23 29.71 4052 -- --
27.32 0.243 9.74 0.873 0.86 -0.146 -- 3.45 0.0897 6.18 26.16 3221 -- --
29.08 0.251 9.83 0.0898 0.875 0.252 -- -- -0.0198 6.23 30.03 3977 -- --
65.09 0.376 9.74 0.99 -- -0.167 -- 3.58 0.135 -- 26.2 2931 -- --
31.28 0.262 9.83 0.152 0.879 -- -0.0118 -- -0.0618 6.15 -- -- -- --
31.28 0.262 9.83 0.152 0.879 -- -- -- -0.0617 6.15 -- -- -- --
67.57 0.383 9.86 0.0882 -- 0.358 -- -- -0.156 -- 32.35 12820 -- --
29.29 0.252 9.83 -- 0.878 0.272 -- -- -0.0248 6.24 30.03 3999 -- --
71.35 0.395 9.85 0.177 -- -- -- -- -0.0422 -- -- -- -- --
31.89 0.264 9.84 -- 0.881 -- -- -- -0.0787 6.14 -- -- -- --
67.19 0.382 9.88 -- -- 0.403 -- -- -0.198 -- 32.51 20106 -- --
72.18 0.397 9.85 -- -- -- -- -- -0.0618 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.68 radiation 1.0 4320 < th dose dependent rect. 18 12
2 25.73 radiation 1.0 4320 < th dose dependent rect. 20 10
4 25.76 radiation 1.0 4320 < th dose dependent rect. 22 8
6 25.78 radiation 1.0 4320 < th dose dependent rect. 24 6
9 25.80 wind 1.0 43200 < th dose independent rect. 2 3
11 25.81 radiation 1.0 4320 < th dose dependent rect. 4 2
13 25.85 wind 1.0 43200 > th dose independent rect. 2 4
18 26.00 radiation 20.0 14400 < th dose dependent rect. 8 1
19 26.02 radiation 10.0 14400 > th dose independent rect. 8 1
20 26.06 radiation 10.0 14400 > th dose independent rect. 6 3
21 26.06 wind 1.0 43200 < th dose dependent rect. 2 6
37 26.09 wind 1.0 14400 < th dose dependent rect. 17 8
39 26.13 radiation 1.0 4320 < th dose independent rect. 18 12
43 26.17 wind 1.0 43200 < th dose dependent rect. 16 6
45 26.18 wind 1.0 43200 > th dose independent rect. 4 2
46 26.18 wind 1.0 14400 < th dose independent rect. 18 8
47 26.19 wind 1.0 43200 > th dose independent rect. 21 1
62 26.21 precipitation 0.1 43200 > th dose independent rect. 24 1
65 26.21 precipitation 0.1 43200 > th dose dependent rect. 24 1
66 26.22 radiation 10.0 14400 < th dose independent rect. 9 1
72 26.24 precipitation 0.1 43200 < th dose independent rect. 21 5
73 26.24 precipitation 0.1 43200 > th dose dependent rect. 21 5
74 26.24 precipitation 0.1 43200 < th dose dependent rect. 21 5
75 26.25 precipitation 0.1 43200 < th dose independent rect. 24 1
77 26.25 precipitation 0.1 43200 > th dose independent rect. 21 5
79 26.25 wind 1.0 43200 > th dose independent rect. 16 9
82 26.25 precipitation 0.1 43200 < th dose dependent rect. 24 1
83 26.25 wind 1.0 43200 < th dose dependent rect. 4 4
87 26.26 radiation 1.0 4320 < th dose dependent rect. 18 9
108 26.28 radiation 1.0 4320 < th dose dependent rect. 18 7
110 26.29 wind 1.0 43200 > th dose independent rect. 10 1
112 26.29 precipitation 0.1 43200 < th dose independent rect. 18 8
114 26.29 precipitation 0.1 43200 < th dose dependent rect. 18 8
116 26.30 radiation 1.0 4320 < th dose dependent rect. 18 5
122 26.31 precipitation 0.1 43200 > th dose independent rect. 18 8
123 26.31 radiation 1.0 4320 < th dose dependent rect. 18 3
124 26.31 wind 1.0 14400 < th dose dependent rect. 21 4
128 26.32 precipitation 0.1 43200 < th dose independent rect. 21 2
131 26.32 precipitation 0.1 43200 < th dose dependent rect. 21 2
141 26.34 radiation 1.0 4320 < th dose dependent rect. 18 1
145 26.35 precipitation 0.1 43200 > th dose independent rect. 21 2
148 26.35 precipitation 0.1 43200 < th dose independent rect. 18 5
151 26.35 wind 1.0 43200 > th dose independent rect. 14 11
154 26.35 precipitation 0.1 43200 < th dose dependent rect. 18 5
157 26.36 precipitation 0.1 43200 > th dose independent rect. 18 5
161 26.36 wind 1.0 43200 < th dose independent rect. 14 11
177 26.38 wind 1.0 43200 < th dose dependent rect. 2 3
179 26.39 wind 1.0 43200 < th dose independent rect. 21 1
184 26.39 wind 1.0 43200 < th dose dependent rect. 6 1
185 26.39 precipitation 0.1 43200 > th dose dependent rect. 21 2
188 26.40 radiation 10.0 14400 > th dose independent sin 9 NA
191 26.41 wind 1.0 43200 < th dose independent rect. 10 1
203 26.41 radiation 20.0 14400 < th dose dependent rect. 6 6
204 26.41 wind 1.0 43200 < th dose dependent rect. 13 12
225 26.44 wind 1.0 14400 > th dose independent rect. 18 8
226 26.44 precipitation 0.1 43200 > th dose independent rect. 11 15
227 26.44 precipitation 0.1 43200 < th dose independent rect. 11 15
233 26.44 precipitation 0.1 43200 < th dose dependent rect. 11 15
253 26.46 precipitation 0.1 43200 > th dose independent rect. 10 5
273 26.46 precipitation 0.1 43200 > th dose dependent rect. 11 4
280 26.47 precipitation 0.1 43200 < th dose independent rect. 11 4
283 26.47 precipitation 0.1 43200 < th dose independent rect. 14 12
291 26.47 precipitation 0.1 43200 < th dose dependent rect. 11 4
295 26.47 precipitation 0.1 43200 < th dose dependent rect. 14 12
305 26.48 precipitation 0.1 43200 > th dose independent rect. 14 12
363 26.49 radiation 1.0 43200 < th dose dependent rect. 20 9
364 26.49 wind 1.0 43200 < th dose dependent rect. 13 10
387 26.50 precipitation 0.1 43200 < th dose independent rect. 11 12
410 26.50 precipitation 0.1 43200 < th dose dependent rect. 11 12
425 26.51 precipitation 0.1 43200 > th dose independent rect. 9 10
436 26.51 radiation 1.0 14400 > th dose dependent rect. 7 2
500 26.53 radiation 1.0 43200 < th dose dependent rect. 24 5
529 26.54 precipitation 0.1 43200 < th dose independent rect. 8 11
535 26.54 radiation 1.0 43200 < th dose dependent rect. 4 1
549 26.54 precipitation 0.1 43200 < th dose dependent rect. 8 11
556 26.55 wind 3.0 14400 > th dose independent rect. 13 1
557 26.55 precipitation 0.1 43200 > th dose independent rect. 18 1
590 26.56 precipitation 0.1 43200 > th dose independent sin 18 NA
591 26.56 precipitation 0.1 43200 < th dose independent sin 17 NA
609 26.56 precipitation 0.1 43200 < th dose dependent sin 17 NA
639 26.57 radiation 20.0 14400 < th dose dependent sin 8 NA
671 26.58 precipitation 0.1 43200 < th dose independent rect. 14 9
714 26.58 precipitation 0.1 43200 < th dose dependent rect. 14 9
728 26.59 precipitation 0.1 43200 > th dose independent rect. 14 9
732 26.59 wind 1.0 43200 > th dose independent rect. 10 15
740 26.59 precipitation 0.1 43200 > th dose dependent rect. 18 8
847 26.62 radiation 20.0 14400 < th dose independent sin 8 NA
892 26.63 precipitation 0.1 43200 < th dose independent rect. 18 1
911 26.63 precipitation 0.1 43200 < th dose dependent rect. 18 1
933 26.64 wind 3.0 14400 < th dose independent rect. 13 1
998 26.65 wind 3.0 14400 < th dose dependent rect. 19 1