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Os01g0869200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mg2+ transporter protein, CorA-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0199) R2 : 0.788
β1 : 2.01 (0.0729) R2dD : 0.365 R2D : 0.277
β2 : 1.51 (0.0506) R2dC : 0.415 R2C : 0.402
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.477 (0.0425) R2dN8 : 0.0783 R2N8 : 0.00558
σ : 0.374
deviance : 63.94
__
_____
C
peak time of C : 8.07
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
56.06 0.352 10.4 2.18 1.93 1.11 -0.751 -1.01 0.539 10.8 0.01807 308 -- --
57.99 0.355 10.4 2.13 1.95 1.19 0.126 -- 0.526 11 0.315 329 -- --
56.88 0.351 10.4 2.14 1.91 1.12 -- -0.49 0.536 10.9 0.11 324 -- --
58.08 0.355 10.4 2.12 1.95 1.2 -- -- 0.527 11.1 0.3158 329 -- --
98.1 0.461 10.4 1.92 -- 1.19 -- 0.258 0.437 -- 2.47 977 -- --
63.87 0.375 10.4 2.01 1.51 -- -0.155 -- 0.477 8.06 -- -- -- --
63.94 0.374 10.4 2.01 1.51 -- -- -- 0.477 8.07 -- -- -- --
74.65 0.402 10.4 2.29 -- 2.21 -- -- 0.583 -- 0.3 973 -- --
166.31 0.604 10.4 -- 1.29 -0.404 -- -- 0.244 6.84 0.3158 329 -- --
188.46 0.641 10.4 2.02 -- -- -- -- 0.495 -- -- -- -- --
170.09 0.61 10.4 -- 1.52 -- -- -- 0.253 7.97 -- -- -- --
197.54 0.655 10.5 -- -- 1.87 -- -- 0.334 -- 8.81 914 -- --
296.16 0.803 10.5 -- -- -- -- -- 0.271 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.79 atmosphere 1015.0 720 < th dose independent rect. 23 20
2 54.60 wind 7.0 720 < th dose independent rect. 19 12
3 54.83 temperature 15.0 720 > th dose independent rect. 7 4
4 54.85 temperature 15.0 270 > th dose independent rect. 7 12
6 55.18 radiation 1.0 720 > th dose independent rect. 7 4
7 55.27 temperature 20.0 90 > th dose independent rect. 24 12
9 55.29 temperature 20.0 90 > th dose independent rect. 16 20
10 55.38 atmosphere 1015.0 720 < th dose independent rect. 24 10
15 55.58 humidity 80.0 30 < th dose independent rect. 8 12
18 55.65 atmosphere 1015.0 720 < th dose independent rect. 22 14
27 55.86 atmosphere 1015.0 720 < th dose independent rect. 23 12
28 55.92 wind 7.0 720 < th dose independent rect. 19 4
55 56.29 humidity 80.0 90 > th dose independent rect. 4 22
59 56.34 humidity 80.0 30 < th dose independent rect. 13 23
67 56.38 humidity 80.0 90 > th dose independent rect. 5 20
70 56.41 humidity 80.0 30 < th dose independent rect. 15 21
85 56.52 wind 5.0 10 < th dose independent rect. 20 12
90 56.55 atmosphere 1015.0 720 < th dose independent rect. 23 5
92 56.55 temperature 20.0 90 > th dose independent rect. 7 22
93 56.55 radiation 1.0 270 < th dose dependent rect. 19 22
105 56.60 radiation 1.0 270 < th dose independent rect. 9 6
109 56.60 radiation 1.0 270 < th dose dependent rect. 9 6
116 56.64 wind 7.0 720 < th dose independent rect. 19 2
119 56.65 radiation 1.0 270 > th dose independent rect. 6 13
142 56.69 radiation 1.0 270 < th dose independent rect. 19 22
169 56.82 wind 9.0 720 < th dose independent rect. 11 20
180 56.86 atmosphere 1015.0 720 < th dose independent rect. 7 20
203 56.96 temperature 10.0 720 > th dose independent rect. 19 12
204 56.96 temperature 30.0 720 < th dose independent rect. 19 12
205 56.96 humidity 50.0 720 > th dose independent rect. 19 12
206 56.96 atmosphere 995.0 720 > th dose independent rect. 19 12
207 56.96 atmosphere 1015.0 720 < th dose independent rect. 7 12
208 56.96 radiation 30.0 720 < th dose independent rect. 19 12
220 56.98 temperature 20.0 90 > th dose independent rect. 21 23
247 57.10 humidity 80.0 90 > th dose independent rect. 10 15
250 57.10 radiation 1.0 270 < th dose dependent rect. 2 23
251 57.11 humidity 80.0 90 > th dose independent sin 20 NA
258 57.15 wind 7.0 720 < th dose independent rect. 1 6
268 57.17 atmosphere 995.0 720 > th dose independent rect. 19 20
315 57.30 radiation 1.0 270 > th dose independent rect. 13 23
319 57.32 temperature 20.0 90 > th dose independent rect. 23 21
364 57.40 humidity 90.0 270 > th dose dependent rect. 11 2
397 57.46 atmosphere 995.0 720 > th dose independent rect. 11 20
398 57.47 humidity 90.0 270 > th dose independent rect. 11 2
404 57.48 precipitation 0.1 720 < th dose independent rect. 19 12
406 57.48 wind 9.0 720 < th dose independent rect. 9 22
409 57.48 radiation 40.0 720 < th dose dependent rect. 19 12
410 57.48 precipitation 0.1 720 < th dose dependent rect. 19 12
451 57.55 humidity 80.0 90 > th dose independent rect. 19 23
468 57.57 humidity 80.0 90 > th dose independent rect. 9 22
473 57.58 atmosphere 1015.0 720 < th dose independent rect. 16 19
487 57.60 humidity 80.0 30 < th dose independent sin 21 NA
502 57.63 humidity 80.0 30 < th dose independent no NA NA
510 57.63 wind 9.0 14400 > th dose dependent rect. 21 16
519 57.64 radiation 1.0 270 < th dose dependent no NA NA
520 57.64 humidity 80.0 270 > th dose dependent rect. 11 4
523 57.64 temperature 20.0 90 < th dose dependent rect. 24 23
533 57.66 precipitation 0.1 720 < th dose independent rect. 7 4
539 57.66 precipitation 0.1 720 < th dose dependent rect. 7 4
552 57.69 temperature 20.0 90 < th dose independent rect. 18 19
580 57.71 humidity 80.0 270 > th dose dependent rect. 10 6
581 57.71 radiation 1.0 270 < th dose dependent rect. 6 23
582 57.71 radiation 1.0 270 < th dose dependent rect. 8 23
592 57.73 wind 9.0 14400 > th dose independent rect. 21 16
596 57.73 radiation 1.0 270 < th dose dependent rect. 12 23
600 57.74 wind 9.0 720 < th dose independent rect. 19 20
608 57.75 wind 9.0 720 < th dose independent rect. 7 4
650 57.83 humidity 80.0 90 > th dose independent no NA NA
652 57.83 atmosphere 1015.0 720 < th dose independent rect. 24 1
658 57.84 atmosphere 1015.0 720 < th dose independent rect. 14 14
670 57.86 precipitation 0.1 720 < th dose independent rect. 19 2
674 57.86 precipitation 0.1 720 < th dose dependent rect. 19 2
683 57.88 temperature 20.0 90 < th dose independent rect. 23 23
694 57.90 humidity 80.0 90 < th dose independent rect. 10 23
695 57.90 wind 9.0 14400 > th dose dependent rect. 3 10
699 57.91 atmosphere 995.0 720 > th dose independent rect. 7 4
700 57.91 atmosphere 1015.0 720 < th dose independent rect. 7 4
706 57.91 temperature 10.0 720 > th dose independent rect. 11 20
714 57.92 humidity 80.0 90 > th dose independent rect. 1 23
715 57.93 precipitation 0.1 720 < th dose independent rect. 7 12
717 57.93 precipitation 0.1 720 < th dose dependent rect. 7 12
723 57.94 atmosphere 995.0 720 > th dose independent rect. 1 15
729 57.95 temperature 10.0 720 > th dose independent rect. 19 4
730 57.95 temperature 30.0 720 < th dose independent rect. 19 4
731 57.95 humidity 50.0 720 > th dose independent rect. 19 4
732 57.95 atmosphere 995.0 720 > th dose independent rect. 19 4
734 57.95 radiation 1.0 720 < th dose independent rect. 19 4
743 57.95 temperature 10.0 720 > th dose independent rect. 23 20
745 57.95 humidity 80.0 30 > th dose independent rect. 15 23
748 57.95 radiation 1.0 720 < th dose dependent rect. 19 4
754 57.95 atmosphere 995.0 10 > th dose dependent rect. 20 12
755 57.95 humidity 70.0 90 > th dose dependent rect. 5 20
757 57.97 precipitation 0.1 720 < th dose independent rect. 19 4
764 57.97 humidity 80.0 30 > th dose independent rect. 13 23
765 57.97 humidity 80.0 30 > th dose independent rect. 17 23
766 57.97 precipitation 0.1 720 < th dose dependent rect. 19 4
774 57.99 temperature 20.0 90 < th dose dependent sin 5 NA
776 58.00 atmosphere 1000.0 720 > th dose independent rect. 19 2
788 58.01 temperature 30.0 720 < th dose independent rect. 7 2
798 58.02 wind 9.0 720 < th dose independent rect. 12 9
810 58.03 temperature 20.0 90 < th dose independent sin 6 NA
812 58.03 atmosphere 995.0 720 > th dose independent rect. 9 7
821 58.05 temperature 20.0 90 > th dose independent no NA NA
832 58.06 humidity 80.0 90 > th dose independent rect. 22 23
839 58.08 precipitation 0.1 720 < th dose independent rect. 7 2
840 58.08 humidity 50.0 720 > th dose independent rect. 7 4
841 58.08 radiation 40.0 720 < th dose independent rect. 15 4
842 58.08 temperature 20.0 270 > th dose independent rect. 15 11
843 58.08 precipitation 0.1 10 < th dose independent rect. 20 12
849 58.08 precipitation 0.1 720 < th dose dependent rect. 7 2
850 58.08 precipitation 0.1 10 < th dose dependent rect. 20 12
856 58.09 humidity 80.0 10 < th dose independent rect. 10 23
864 58.11 temperature 20.0 90 < th dose independent no NA NA
868 58.12 wind 9.0 14400 > th dose independent rect. 3 10
871 58.12 temperature 20.0 90 < th dose independent rect. 23 13
872 58.12 humidity 80.0 90 > th dose independent rect. 5 13
881 58.13 temperature 20.0 90 < th dose independent rect. 3 23
883 58.14 temperature 20.0 90 > th dose independent sin 5 NA
898 58.15 temperature 10.0 720 > th dose independent rect. 3 4
899 58.15 temperature 30.0 720 < th dose independent rect. 3 4
900 58.15 humidity 50.0 720 > th dose independent rect. 3 4
903 58.15 atmosphere 995.0 720 > th dose independent rect. 3 4
904 58.15 radiation 30.0 720 < th dose independent rect. 3 4
906 58.15 wind 7.0 270 > th dose independent rect. 1 7
909 58.15 wind 9.0 14400 < th dose independent rect. 21 15
914 58.15 temperature 10.0 720 > th dose independent rect. 7 20
917 58.15 temperature 15.0 10 > th dose dependent rect. 1 11
918 58.15 wind 9.0 720 > th dose dependent rect. 18 16
924 58.16 radiation 1.0 270 < th dose independent rect. 2 23
934 58.17 temperature 20.0 90 < th dose independent rect. 8 23
936 58.17 humidity 80.0 90 > th dose dependent sin 22 NA
939 58.18 wind 9.0 720 < th dose independent rect. 7 2
942 58.18 humidity 50.0 720 > th dose independent rect. 7 2
943 58.18 atmosphere 995.0 720 > th dose independent rect. 7 2
944 58.18 atmosphere 1015.0 720 < th dose independent rect. 7 2
945 58.18 temperature 10.0 720 > th dose independent rect. 15 4
947 58.18 atmosphere 1015.0 720 < th dose independent rect. 15 4
953 58.18 temperature 10.0 720 > th dose independent rect. 19 20
955 58.18 temperature 10.0 720 > th dose independent rect. 9 22
966 58.19 temperature 20.0 90 < th dose independent rect. 21 23
968 58.19 wind 7.0 270 > th dose dependent rect. 1 7
971 58.19 temperature 15.0 30 > th dose dependent rect. 16 20
983 58.21 radiation 1.0 270 < th dose independent rect. 7 23
997 58.23 temperature 10.0 720 > th dose independent rect. 19 2
998 58.23 temperature 30.0 720 < th dose independent rect. 19 2
999 58.23 humidity 50.0 720 > th dose independent rect. 19 2