BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0521600 Os10g0521600|AK065223
(242 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0521600 Similar to Ankyrin-1 (Erythrocyte ankyrin) 497 e-141
Os02g0791200 Zinc finger, RING-type domain containing protein 258 2e-69
Os08g0258200 Zinc finger, RING-type domain containing protein 245 2e-65
Os04g0351300 116 2e-26
Os05g0112000 Zinc finger, RING-type domain containing protein 82 2e-16
Os01g0974400 Zinc finger, RING-type domain containing protein 81 8e-16
Os02g0494400 Tetratricopeptide-like helical domain containi... 67 1e-11
>Os10g0521600 Similar to Ankyrin-1 (Erythrocyte ankyrin)
Length = 242
Score = 497 bits (1279), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/242 (100%), Positives = 242/242 (100%)
Query: 1 MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI 60
MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI
Sbjct: 1 MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI 60
Query: 61 VTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAA 120
VTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAA
Sbjct: 61 VTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAA 120
Query: 121 HDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYIN 180
HDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYIN
Sbjct: 121 HDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYIN 180
Query: 181 KPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGNWQYSFALCSWWR 240
KPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGNWQYSFALCSWWR
Sbjct: 181 KPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGNWQYSFALCSWWR 240
Query: 241 KC 242
KC
Sbjct: 241 KC 242
>Os02g0791200 Zinc finger, RING-type domain containing protein
Length = 531
Score = 258 bits (659), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 168/227 (74%), Gaps = 11/227 (4%)
Query: 1 MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI 60
+GNS GCSASGERLVSAARDGD EAR LLE +P LARYSTFGG NSPLH+AAA+GH +I
Sbjct: 42 VGNSFGCSASGERLVSAARDGDLQEARALLEYNPRLARYSTFGGRNSPLHYAAAQGHHEI 101
Query: 61 VTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAA 120
V+LLLE G ++N+RNY GQTALM AC++GHWEVVQ L+LF NV R DYL+G +ALHFAA
Sbjct: 102 VSLLLESGVEINLRNYRGQTALMQACQYGHWEVVQTLMLFNANVHRTDYLNGGSALHFAA 161
Query: 121 HDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYIN 180
G RC+RL+LAD+VPS P + +S D + S P + L +E + +N
Sbjct: 162 LHGHARCLRLVLADYVPSMP--NFWNSMKD-----SLSEEGPSADL----DEDGLFKMVN 210
Query: 181 KPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIG 227
+ ADGG+T LHMAALNGH +C+QLL+DLGA+V T GTT +LIG
Sbjct: 211 QKADGGLTPLHMAALNGHVECVQLLLDLGASVIEATIEDGTTIDLIG 257
>Os08g0258200 Zinc finger, RING-type domain containing protein
Length = 495
Score = 245 bits (626), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/228 (56%), Positives = 164/228 (71%), Gaps = 11/228 (4%)
Query: 1 MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI 60
+G+S GCSA+GERLVSAARDGD EA LLEL+P LARYSTFG NSPLH++AAKGH +I
Sbjct: 7 VGDSFGCSATGERLVSAARDGDIQEAMALLELNPRLARYSTFGIRNSPLHYSAAKGHHEI 66
Query: 61 VTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAA 120
V+LL+E G D+N+RN GQTALM AC +GHW+VVQ+L+LF+ N+ + D SG TA+HFAA
Sbjct: 67 VSLLIESGVDINLRNCRGQTALMQACLYGHWKVVQILVLFKANIHKKDCFSGATAIHFAA 126
Query: 121 HDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYIN 180
G RC+RLL+AD+VPS P +V +C + F+ A R IN
Sbjct: 127 LKGHTRCLRLLVADYVPSLP----EFWSVMHAKCTDETNKE-------AFDAVALRRLIN 175
Query: 181 KPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYGTTANLIGN 228
+DGGVT LH+AAL+GH +C+QLL+DLGA+VS VT G+T +LIG+
Sbjct: 176 NKSDGGVTPLHLAALHGHAECVQLLLDLGASVSEVTINDGSTIDLIGS 223
>Os04g0351300
Length = 122
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 68/83 (81%)
Query: 1 MGNSLGCSASGERLVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDI 60
+GNS+GCSASGERLVSA RDGD EAR LLE +P LA YSTFGG NSPLH+AAA+GH +I
Sbjct: 7 VGNSIGCSASGERLVSADRDGDLQEARALLEYNPRLAWYSTFGGRNSPLHYAAAQGHHEI 66
Query: 61 VTLLLEKGADVNVRNYCGQTALM 83
V+LLLE ++N+RNY GQ +M
Sbjct: 67 VSLLLESEVEINLRNYRGQGRVM 89
>Os05g0112000 Zinc finger, RING-type domain containing protein
Length = 450
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 108/222 (48%), Gaps = 31/222 (13%)
Query: 1 MGNSLGCSASGER--LVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHL 58
MG+ + C+ +G+ AA+ GD LL P+LAR +T S LH AAA G +
Sbjct: 1 MGHGVSCARTGDEHDFFRAAQLGDLDALAALLAADPSLARRATLYDRLSVLHIAAANGRI 60
Query: 59 DIVTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHF 118
+++++ L++GA + N QT LM A HG + V LL N+ D + RT LH
Sbjct: 61 EVLSMFLDRGAPPDAVNRHKQTPLMLAAMHGKIDCVLKLLQADANILMFDSVHARTCLHH 120
Query: 119 AAHDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRY 178
AA+ G V C++ +LA + P+ D S G R+
Sbjct: 121 AAYYGHVDCLQAILA-AAQTTPVAD---------------------SWGFA-------RF 151
Query: 179 INKPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYG 220
+N D G T LH+AA G C+Q+L++ GA VSA+T YG
Sbjct: 152 VNVRDDHGATPLHLAARQGRPGCVQVLLENGAIVSALTGSYG 193
>Os01g0974400 Zinc finger, RING-type domain containing protein
Length = 446
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 106/222 (47%), Gaps = 29/222 (13%)
Query: 1 MGNSLGCSASGER--LVSAARDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHL 58
MG+ L CS + L AA+ GD LL PALAR +T + LH AAA G L
Sbjct: 1 MGHGLSCSRDTDEYDLFRAAQLGDIHALSALLAADPALARRATVYDRFTALHIAAANGRL 60
Query: 59 DIVTLLLEKGADVNVRNYCGQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHF 118
++++LL++ DV+V + QT LM A G+ E V LL NV D RT LH
Sbjct: 61 QVLSMLLDRDGDVDVLSRKKQTPLMVAAMRGNTECVVRLLRGGANVLTFDSPRARTCLHH 120
Query: 119 AAHDGLVRCVRLLLADFVPSAPLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRY 178
AA+ G C++ +L GA++ G +S G R+
Sbjct: 121 AAYYGHAECLQAIL-----------GAAAQAQG---------PVAASWGFA-------RF 153
Query: 179 INKPADGGVTALHMAALNGHFDCMQLLIDLGANVSAVTFPYG 220
+N + G T LH+AA + C++LL+D GA VSA T YG
Sbjct: 154 VNVRDERGATPLHLAARHARASCVRLLLDKGAIVSAPTAVYG 195
>Os02g0494400 Tetratricopeptide-like helical domain containing protein
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 34/203 (16%)
Query: 19 RDGDAVEARMLLELSPALARYSTFGGLNSPLHFAAAKGHLDIVTLLLEK-GADVNVRNYC 77
R G+AV+A A R + GG+ + LH AA KG L++ L+E+ DV+ +
Sbjct: 31 RIGEAVQA--------ARVRGAPMGGMGA-LHLAAGKGRLEVCRYLVEELRLDVDDADQE 81
Query: 78 GQTALMHACRHGHWEVVQMLLLFRCNVTRADYLSGRTALHFAAHDGLVRCVRLLLA---- 133
G+TAL+ A H V+ LL +V +A + GRT LH+A H G V+LLLA
Sbjct: 82 GRTALIIATLCKHLSTVKYLLDHGADVNKASH-DGRTPLHYATHLGDCGTVQLLLAKGAC 140
Query: 134 -DFVPS--APLEDGASSTVDGGECQTNSGSSPCSSLGLKFNESARLRYINKPADGGVTAL 190
D V + PL AS DG ++ + + +A NK DG +T L
Sbjct: 141 VDTVANRGTPLHVAASKGKDG-------------AMKILLDHNADF---NKMVDGHLTPL 184
Query: 191 HMAALNGHFDCMQLLIDLGANVS 213
A G C+ LLI+ GA VS
Sbjct: 185 ATAITAGELKCVNLLIEAGAVVS 207
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,863,628
Number of extensions: 372315
Number of successful extensions: 1814
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1816
Number of HSP's successfully gapped: 7
Length of query: 242
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 144
Effective length of database: 11,918,829
Effective search space: 1716311376
Effective search space used: 1716311376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 154 (63.9 bits)