Os10g0521600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ankyrin-1 (Erythrocyte ankyrin).
FiT-DB / Search/ Help/ Sample detail
|
Os10g0521600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ankyrin-1 (Erythrocyte ankyrin).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.94 | 0.235 | 10.8 | 0.485 | 0.331 | -0.84 | -0.0535 | -1.72 | 0.306 | 2.84 | 25.8 | 1381 | -- | -- |
| 26.89 | 0.241 | 10.8 | 0.145 | 0.377 | -0.692 | 0.0195 | -- | 0.261 | 3.43 | 37.43 | 1984 | -- | -- |
| 24.95 | 0.233 | 10.8 | 0.484 | 0.331 | -0.84 | -- | -1.71 | 0.305 | 2.82 | 25.8 | 1384 | -- | -- |
| 26.89 | 0.241 | 10.8 | 0.145 | 0.377 | -0.692 | -- | -- | 0.26 | 3.44 | 47.97 | 1984 | -- | -- |
| 30.63 | 0.258 | 10.8 | 0.507 | -- | -0.823 | -- | -1.63 | 0.309 | -- | 26.46 | 2533 | -- | -- |
| 35.09 | 0.278 | 10.8 | 0.379 | 0.372 | -- | 0.0452 | -- | 0.392 | 2.8 | -- | -- | -- | -- |
| 35.1 | 0.277 | 10.8 | 0.378 | 0.372 | -- | -- | -- | 0.392 | 2.82 | -- | -- | -- | -- |
| 31.8 | 0.263 | 10.8 | 0.147 | -- | -0.821 | -- | -- | 0.257 | -- | 70.66 | 1154 | -- | -- |
| 27.34 | 0.244 | 10.8 | -- | 0.365 | -0.741 | -- | -- | 0.235 | 3.6 | 56.13 | 2100 | -- | -- |
| 43.13 | 0.307 | 10.8 | 0.394 | -- | -- | -- | -- | 0.401 | -- | -- | -- | -- | -- |
| 38.87 | 0.292 | 10.8 | -- | 0.38 | -- | -- | -- | 0.35 | 2.83 | -- | -- | -- | -- |
| 32.3 | 0.265 | 10.8 | -- | -- | -0.882 | -- | -- | 0.231 | -- | 64.28 | 1158 | -- | -- |
| 47.22 | 0.321 | 10.8 | -- | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 16 | 24.34 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 25 | 24.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 40 | 24.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 42 | 24.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 15 |
| 46 | 24.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 48 | 24.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 50 | 24.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 52 | 24.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 144 | 24.52 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 162 | 24.53 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 184 | 24.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 230 | 24.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 303 | 24.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 505 | 24.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 528 | 24.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 895 | 25.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 897 | 25.02 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 919 | 25.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 937 | 25.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 954 | 25.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 21 |