Os02g0791200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0791200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.64 | 0.28 | 10.6 | -1.11 | 0.627 | 0.807 | 0.121 | -0.226 | -0.196 | 5.96 | 20.63 | 1303 | -- | -- |
| 35.68 | 0.278 | 10.6 | -1.05 | 0.628 | 0.798 | 0.098 | -- | -0.18 | 5.97 | 20.57 | 1293 | -- | -- |
| 35.68 | 0.278 | 10.6 | -1.11 | 0.628 | 0.808 | -- | -0.22 | -0.196 | 5.96 | 20.64 | 1293 | -- | -- |
| 35.72 | 0.278 | 10.6 | -1.05 | 0.628 | 0.796 | -- | -- | -0.179 | 5.95 | 20.58 | 1297 | -- | -- |
| 55.98 | 0.348 | 10.6 | -1.07 | -- | 0.867 | -- | -0.102 | -0.186 | -- | 20.7 | 1300 | -- | -- |
| 55.11 | 0.348 | 10.5 | -0.767 | 0.684 | -- | 0.136 | -- | 0.00383 | 5.46 | -- | -- | -- | -- |
| 55.16 | 0.348 | 10.5 | -0.767 | 0.685 | -- | -- | -- | 0.00321 | 5.45 | -- | -- | -- | -- |
| 56 | 0.349 | 10.6 | -1.05 | -- | 0.855 | -- | -- | -0.178 | -- | 20.73 | 1301 | -- | -- |
| 61.38 | 0.365 | 10.5 | -- | 0.628 | 0.523 | -- | -- | -0.00612 | 5.93 | 21.85 | 1257 | -- | -- |
| 79.56 | 0.417 | 10.5 | -0.744 | -- | -- | -- | -- | 0.02 | -- | -- | -- | -- | -- |
| 70.66 | 0.393 | 10.5 | -- | 0.672 | -- | -- | -- | 0.0886 | 5.5 | -- | -- | -- | -- |
| 81.77 | 0.421 | 10.5 | -- | -- | 0.571 | -- | -- | -0.00239 | -- | 22 | 1286 | -- | -- |
| 94.16 | 0.453 | 10.5 | -- | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 17 |
| 13 | 35.40 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 86 | 35.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 122 | 35.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 123 | 35.92 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 130 | 35.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 143 | 35.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 144 | 35.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 145 | 35.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 150 | 35.97 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 167 | 36.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 380 | 36.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 474 | 36.37 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 534 | 36.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 564 | 36.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 742 | 36.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 837 | 36.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 5 |
| 838 | 36.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 986 | 36.82 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |