BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0334500 Os10g0334500|Os10g0334500
(204 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0334500 Plant disease resistance response protein fami... 427 e-120
Os12g0449800 189 2e-48
Os08g0349100 Plant disease resistance response protein fami... 180 6e-46
Os08g0354400 180 8e-46
Os08g0349800 178 2e-45
Os10g0333700 Plant disease resistance response protein fami... 142 2e-34
Os10g0335000 Conserved hypothetical protein 139 1e-33
Os01g0352400 130 7e-31
Os12g0198700 Similar to Jasmonate-induced protein 102 2e-22
Os12g0247700 Similar to Jasmonate-induced protein 92 2e-19
Os11g0616100 Similar to Serine/threonine-protein kinase mos... 91 7e-19
Os12g0199000 Similar to Agglutinin alpha chain (MPA) 87 6e-18
Os12g0227500 Similar to Beta-glucosidase aggregating factor 83 1e-16
>Os10g0334500 Plant disease resistance response protein family protein
Length = 204
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR
Sbjct: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
Query: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV
Sbjct: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
Query: 121 FQDDRFKGSTLQVMGIIAASSGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIR 180
FQDDRFKGSTLQVMGIIAASSGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIR
Sbjct: 121 FQDDRFKGSTLQVMGIIAASSGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIR 180
Query: 181 AIYTADNPQAARGTASVANATRLP 204
AIYTADNPQAARGTASVANATRLP
Sbjct: 181 AIYTADNPQAARGTASVANATRLP 204
>Os12g0449800
Length = 196
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 120/191 (62%), Gaps = 11/191 (5%)
Query: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
M + + + IL +LP L+MA Y D C CP Q EV +H YLHQF AGANHPNR
Sbjct: 1 MGSLCGTMIIILAMLPAILTMA-DPYCD-----CDCPQQCEVKLHYYLHQFRAGANHPNR 54
Query: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
NEEFV S P+G G L+ DW LT +PN NIV R QG H+ A QS+ WY S NIV
Sbjct: 55 NEEFV-TSGGPSGLGAGLIHDWSLTTGLDPNVNIVGRAQGWHIVASQSSPANWYLSQNIV 113
Query: 121 FQDDRFKGSTLQVMGIIAASS---GEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVREL 177
FQD ++ GSTLQVMGII S GEWS++GGTGEF+ A G+IK+ E +REL
Sbjct: 114 FQDSKYAGSTLQVMGIIEGSEEKVGEWSIVGGTGEFTNARGNIKYRAIKKEDVE-WIREL 172
Query: 178 NIRAIYTADNP 188
+I+ YT + P
Sbjct: 173 DIQVFYTPNTP 183
>Os08g0349100 Plant disease resistance response protein family protein
Length = 188
Score = 180 bits (457), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 3/187 (1%)
Query: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
MAT S S +F+ LP L + A+ DI P C C +NE ++H+YLHQF A PNR
Sbjct: 1 MATPSHSLIFLFLCLPAVL-VKANILGDIYPCPCKCSQENETSLHMYLHQFPALPGVPNR 59
Query: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
NE VI S+ P GFG V DW LT T+ N+N+V R+QG H+QAGQ+ + WY +H IV
Sbjct: 60 NEYGVINSTEPVGFGQMYVHDWLLTTGTSANENVVGRLQGFHLQAGQTTTS-WYMAHTIV 118
Query: 121 FQDDRFKGSTLQVMGIIAAS-SGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNI 179
F D F GST++V G++ +G+WS+ GGTG F+ AHG+IKFT SST+ D +REL+I
Sbjct: 119 FTDGSFAGSTIEVSGLLGVKPNGQWSITGGTGTFASAHGTIKFTNSQSSTATDDIRELDI 178
Query: 180 RAIYTAD 186
+T +
Sbjct: 179 HVFHTPE 185
>Os08g0354400
Length = 188
Score = 180 bits (456), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 121/187 (64%), Gaps = 3/187 (1%)
Query: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
MAT S S +F+ LP L + A+ DI P C C +NE ++H+YLHQF A PNR
Sbjct: 1 MATPSHSLIFLFLCLPAVL-VKANILGDIYPCPCKCSQENETSLHMYLHQFPALPGVPNR 59
Query: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
NE VI S+ P GFG V DW LT T+ N+N+V R+QG H+QAGQ+ + WY +H +V
Sbjct: 60 NEYGVINSTEPIGFGQMYVHDWLLTTGTSANENVVGRLQGFHLQAGQTTTS-WYMAHTMV 118
Query: 121 FQDDRFKGSTLQVMGIIAAS-SGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNI 179
F D F GST++V G++ +G+WS+ GGTG F+ AHG+IKFT SST+ D +REL+I
Sbjct: 119 FSDGSFAGSTIEVFGLLGVKPNGQWSITGGTGTFASAHGTIKFTNSQSSTATDDIRELDI 178
Query: 180 RAIYTAD 186
+T +
Sbjct: 179 HVFHTPE 185
>Os08g0349800
Length = 188
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 120/185 (64%), Gaps = 3/185 (1%)
Query: 1 MATYSSSALFILFLLPTFLSMAASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNR 60
MAT S +F+ LP L + A+ + DI P C C +NE ++H+YLHQF A PNR
Sbjct: 1 MATPSHCLIFLFLCLPAVL-VKANIFGDIYPCPCKCSQENETSLHMYLHQFPALPGVPNR 59
Query: 61 NEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIV 120
NE VI S+ P GFG V DW LT T+ N+N+V R+QG H+QAGQ+ + WY +H +V
Sbjct: 60 NEYGVINSTEPIGFGQMYVHDWLLTTGTSANENVVGRLQGFHLQAGQTTTS-WYMAHTMV 118
Query: 121 FQDDRFKGSTLQVMGIIAAS-SGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNI 179
F D F GST++V G++ +G+WS+ GGTG F+ AHG+IKFT SST+ D +REL+I
Sbjct: 119 FSDGSFAGSTIEVSGLLGVKPNGQWSITGGTGTFASAHGTIKFTNSQSSTATDDIRELDI 178
Query: 180 RAIYT 184
+T
Sbjct: 179 HVFHT 183
>Os10g0333700 Plant disease resistance response protein family protein
Length = 167
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 26 YYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVI-ASSYPNGFGTTLVDDWYL 84
YY+I PVEC QNE+ MHLYL Q G PNR++E ++ PN FG T W +
Sbjct: 3 YYEIAPVECPL-QQNELYMHLYLRQADRG---PNRDQEVILNPKVRPNDFGLTAATAWTI 58
Query: 85 TATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGEW 144
+ + +P+ IVAR +G H+Q +N + WY S NIVF+DDRFKGS LQVMG A G+W
Sbjct: 59 SDSLDPSAKIVARAEGFHMQTSYNNTS-WYASFNIVFEDDRFKGSMLQVMGTTPA-EGQW 116
Query: 145 SVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAIYTADN 187
++ GTGEF++AHG IK S+ E+ V+EL++ A YT N
Sbjct: 117 AISSGTGEFALAHGIIKQKVIQSTPGEN-VKELHVHAFYTPMN 158
>Os10g0335000 Conserved hypothetical protein
Length = 186
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 6/169 (3%)
Query: 23 ASTYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVIASSYPNGFGTTLVDDW 82
AS ++ + PV DQ E+TM LYLHQ V G NH N+E ++ SS+P FG +++DW
Sbjct: 2 ASPFFKVIPVRPVLRDQCEITMRLYLHQVVTGPNH---NQETMVPSSHPASFGMIVINDW 58
Query: 83 YLTATTNPN-DNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASS 141
+ + N IVA +GMHVQ Q N N WYTS NI F D RF GS LQVMG +
Sbjct: 59 PIYDGPDFNTSTIVAHARGMHVQVDQVN-NTWYTSMNIEFVDARFNGSKLQVMGT-TPET 116
Query: 142 GEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAIYTADNPQA 190
GEW+++GGTG+ +MA+G+I+ ++ + R+L+I A Y+ QA
Sbjct: 117 GEWAIVGGTGQLAMAYGTIQHNIVKNNPGIETTRQLDIHAFYSTPQTQA 165
>Os01g0352400
Length = 328
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 103/176 (58%), Gaps = 14/176 (7%)
Query: 26 YYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVIASSYPNGFGTTLVDDWYLT 85
YY I P+ C QNE+ MHLY++Q AG + N+ VI SS P GFG T+++DW +T
Sbjct: 3 YYAIAPILCAL-VQNELYMHLYINQVYAGQS---TNQLVVITSSQPQGFGITVINDWPIT 58
Query: 86 ATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGEWS 145
N V R QG+H Q+GQ+ + WYTS N++F+D RF GS+LQVMG I GEWS
Sbjct: 59 D----GANTVGRAQGLHFQSGQT-SQKWYTSMNLIFEDTRFSGSSLQVMGTI-PQDGEWS 112
Query: 146 VIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAIYTADNPQAARGTASVANAT 201
+IGGTGEF A G ++ + EL I A YT P + G+++ N T
Sbjct: 113 IIGGTGEFVAAQGIVEHNVIQEAGGA-WTYELKIHAFYT---PMQSSGSSTKINIT 164
>Os12g0198700 Similar to Jasmonate-induced protein
Length = 307
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 86/150 (57%), Gaps = 12/150 (8%)
Query: 34 CGCPDQ-NEVTM-HLYLHQFVAGANHPNRNEEFVIASSYPNGFGTTLVDDWYLTATTNPN 91
C P Q NE+ LYLH AG P N+ V +++ G G+ +V++W + +
Sbjct: 11 CSTPIQGNEINFSKLYLHHTPAG---PRPNQSGVTSTNKETGLGSLVVNNWQVYDGIGCD 67
Query: 92 DNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGEWSVIGGTG 151
+VA QG+HV AG W+ S +VF+D+RFKGSTL+VMGI+ GEW+++GGTG
Sbjct: 68 AKVVAHAQGLHVYAGN-----WHNSFTLVFEDERFKGSTLEVMGIV-VEQGEWAIVGGTG 121
Query: 152 EFSMAHGSIKFTTDPSSTSEDAVRELNIRA 181
+F+MA+G I F E + EL I+
Sbjct: 122 QFAMANGVI-FKKFHEQKKEGNIMELTIKG 150
>Os12g0247700 Similar to Jasmonate-induced protein
Length = 306
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 13/142 (9%)
Query: 21 MAASTYYDICPVECGCPDQ-NEVTM-HLYLHQFVAGANHPNRNEEFVIASSYPNGFGTTL 78
MA + I P CG Q N++ LYLH AG P +N+ V ++ G G +
Sbjct: 1 MADPSKLQITP--CGMLVQGNQINFTKLYLHHTPAG---PEQNQSAVTSNDKKTGLGCIV 55
Query: 79 VDDWYLTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIA 138
V++W + + +VA +G+HV AG W+ S ++VF+D+R KGSTLQVMG+I
Sbjct: 56 VNNWSVYDGIGSDAKLVAYAKGLHVFAG-----AWHNSFSLVFEDERLKGSTLQVMGLI- 109
Query: 139 ASSGEWSVIGGTGEFSMAHGSI 160
G+W+++GGTG+F+MA G I
Sbjct: 110 VEEGDWAIVGGTGQFAMATGVI 131
>Os11g0616100 Similar to Serine/threonine-protein kinase mos (EC 2.7.1.37)
(Oocyte maturation factor mos) (Fragment)
Length = 271
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 27 YDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVIASS----YPNG----FGTTL 78
+++ P + + + L+LHQ +G PN+N++ +I P G FG
Sbjct: 3 HELIPAQTTSSTHKHLNLDLFLHQAYSG---PNKNQQVLIKPGGNYLQPGGNYLQFGVLA 59
Query: 79 VDDWYLTATTNPND-NIVARVQGMHVQAGQSNANMWYTSHNIVFQD-DRFKGSTLQVMGI 136
V DW L + + +VAR +G H+Q Q + W+T+ IVF D F GSTL V G
Sbjct: 60 VHDWPLYDDEDQSKGKLVARARGHHMQTVQEMVDQWFTTGQIVFVDGSEFVGSTLLVAGT 119
Query: 137 -IAASSGEWSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAIYT 184
GEW+++GGTG+FS+A G I ++ VR L IRA Y+
Sbjct: 120 YTTGQKGEWAIVGGTGKFSLAQGVIHKEMVRTNPGTGEVRLLQIRAKYS 168
>Os12g0199000 Similar to Agglutinin alpha chain (MPA)
Length = 258
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 12/143 (8%)
Query: 40 NEVTMH-LYLHQFVAGANHPNRNEEFVIASSYPNGFGTTLVDDWYLTATTNPNDNIVARV 98
NE+ LYLH AG P ++ + ++ G G +V++W + + +VAR
Sbjct: 20 NEINFSMLYLHHTPAG---PRPDQSGLTGNNRETGLGPLVVNNWPVYDGIGRDAKVVARA 76
Query: 99 QGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGEWSVIGGTGEFSMAHG 158
QG+H+ AG W+ S ++VF+D+R GSTL+VMGI+ GEW+++GGTG+F+MA+G
Sbjct: 77 QGLHIYAGN-----WHNSFSLVFKDER-SGSTLEVMGIVV-ERGEWAIVGGTGQFAMANG 129
Query: 159 SIKFTTDPSSTSEDAVRELNIRA 181
I F E + EL I+
Sbjct: 130 VI-FKKFHEQKQEGNIMELTIQG 151
>Os12g0227500 Similar to Beta-glucosidase aggregating factor
Length = 154
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 24 STYYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVIASSYPNGFGTTLVDDWY 83
++YY+I + +LYL+ + ++ PN+ + +I + G V++W
Sbjct: 2 ASYYEITSRGALIKGREFNFSNLYLYH-IYNSSEPNQQQ--IIDNVSSTAMGGLTVNNWT 58
Query: 84 LTATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGE 143
+ + +VAR QG+H AG W+ S +VF+D+RF GSTL+V GI + +
Sbjct: 59 VYDGVASDATLVARGQGLHTYAGN-----WHCSFTLVFEDERFNGSTLEVKGIFEETH-D 112
Query: 144 WSVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAI 182
W+++GGTGEF+MA G IK T T E + EL IR
Sbjct: 113 WAIVGGTGEFAMASGVIKKTV-YERTPEGTIIELTIRGF 150
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.130 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,750,648
Number of extensions: 269895
Number of successful extensions: 740
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 721
Number of HSP's successfully gapped: 14
Length of query: 204
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 108
Effective length of database: 12,023,257
Effective search space: 1298511756
Effective search space used: 1298511756
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)