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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0335000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : -10.3 (1.31) R2 : 0.204
β1 : 34.2 (3.4) R2dD : 183 R2D : -645
β2 : -- (--) R2dC : -- R2C : --
β3 : -2010 (199) R2dE : 68500 R2E : -69000
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 5220 (517) R2dD*E : 68300 R2D*E : -67800
γ1 : -0.0426 (0.0629) R2dN8 : 0.00104 R2N8 : -462
σ : 0.551
deviance : 139.81
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 50
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11
open length of G : 1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
136.5 0.544 -10.3 34.2 0.195 -2010 0.493 5220 -0.0426 12.1 50 10 11 1
167.67 0.608 2.99 -0.131 0.243 0.499 0.76 -- -0.0503 12.1 50 10 11 1
137.54 0.546 -10.3 34.2 0.195 -2010 -- 5220 -0.0426 12.1 50 10 11 1
159.74 0.593 2.99 -0.0762 0.0164 0.955 -- -- -0.00904 15.9 84.69 2 11 1.32
139.81 0.551 -10.3 34.2 -- -2010 -- 5220 -0.0426 -- 50 10 11 1
168.37 0.608 2.99 -0.112 0.255 -- 0.823 -- -0.0523 12.1 -- -- -- --
171.3 0.613 2.99 -0.0798 0.252 -- -- -- -0.0483 12.3 -- -- -- --
159.68 0.589 2.98 -0.0741 -- 0.987 -- -- 0.023 -- 87.12 2 11 1
159.84 0.589 2.98 -- 0.0167 1 -- -- 0.0292 14.5 86.1 2 11 1.26
175.31 0.619 3 -0.0881 -- -- -- -- -0.0522 -- -- -- -- --
171.47 0.613 2.99 -- 0.254 -- -- -- -0.0394 12.3 -- -- -- --
159.85 0.589 2.98 -- -- 1.01 -- -- 0.03 -- 86.47 2 11 1.25
175.52 0.618 3 -- -- -- -- -- -0.0424 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.50 humidity 50.0 10 < th dose independent rect. 11 1
93 136.50 humidity 50.0 10 < th dose dependent rect. 11 1
185 152.73 radiation 40.0 90 > th dose independent rect. 10 1
186 153.16 wind 1.0 90 > th dose dependent rect. 10 1
187 154.16 humidity 90.0 10 < th dose dependent rect. 10 2
191 154.83 humidity 80.0 30 < th dose independent rect. 10 2
196 155.10 radiation 1.0 90 > th dose dependent rect. 10 2
209 155.75 wind 1.0 270 > th dose dependent rect. 8 3
217 156.20 radiation 30.0 90 > th dose dependent rect. 10 1
221 156.27 radiation 10.0 10 > th dose independent rect. 10 2
224 156.33 wind 1.0 10 > th dose independent rect. 10 2
228 156.47 radiation 10.0 90 > th dose independent rect. 10 2
265 156.72 wind 1.0 90 > th dose independent rect. 10 2
275 156.95 temperature 30.0 90 < th dose independent rect. 10 2
280 157.01 wind 7.0 90 < th dose independent rect. 11 23
285 157.06 atmosphere 1000.0 10 > th dose independent rect. 10 2
288 157.09 temperature 10.0 10 > th dose dependent rect. 10 2
296 157.21 temperature 10.0 10 > th dose independent rect. 10 2
299 157.21 atmosphere 1015.0 10 < th dose independent rect. 10 2
300 157.21 precipitation 0.1 10 < th dose independent rect. 10 2
301 157.21 temperature 10.0 10 > th dose independent rect. 12 22
303 157.21 precipitation 0.1 10 < th dose dependent rect. 10 2
307 157.25 wind 9.0 10 < th dose independent rect. 12 22
329 157.40 precipitation 0.1 1440 < th dose independent rect. 11 2
330 157.40 precipitation 0.1 1440 < th dose dependent rect. 11 2
338 157.49 temperature 10.0 1440 > th dose independent rect. 11 2
342 157.49 atmosphere 995.0 1440 > th dose independent rect. 11 2
344 157.49 temperature 10.0 1440 > th dose independent rect. 13 22
358 157.64 wind 9.0 30 < th dose independent rect. 10 2
371 157.67 wind 5.0 720 > th dose dependent rect. 1 6
421 157.86 wind 1.0 270 > th dose independent rect. 7 5
444 157.96 precipitation 0.1 30 < th dose independent rect. 12 22
445 157.96 precipitation 0.1 30 < th dose dependent rect. 12 22
469 158.06 wind 5.0 90 > th dose independent rect. 10 1
533 158.22 radiation 1.0 30 > th dose independent rect. 12 22
537 158.24 atmosphere 1005.0 10 < th dose independent rect. 9 3
538 158.24 atmosphere 995.0 10 > th dose independent rect. 12 22
596 158.37 radiation 40.0 90 < th dose independent rect. 12 23
602 158.38 atmosphere 995.0 10 > th dose dependent rect. 11 1
701 158.54 wind 7.0 270 < th dose independent rect. 3 14
734 158.57 wind 5.0 720 > th dose independent rect. 1 6
816 158.77 atmosphere 1015.0 30 < th dose independent rect. 12 22
817 158.79 radiation 40.0 270 < th dose independent rect. 8 1
818 158.80 humidity 60.0 90 < th dose independent sin 8 NA
851 158.89 temperature 10.0 90 > th dose dependent rect. 21 15
912 158.97 radiation 1.0 10 > th dose dependent rect. 10 2
929 158.98 radiation 1.0 90 > th dose dependent rect. 4 8
961 159.01 temperature 10.0 43200 > th dose independent rect. 13 7
962 159.01 humidity 50.0 10 > th dose independent rect. 12 22
967 159.04 wind 7.0 90 > th dose independent rect. 10 3
972 159.06 wind 7.0 270 < th dose independent rect. 9 23