Os12g0247700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Jasmonate-induced protein.
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Os12g0247700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Jasmonate-induced protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3615.21 | 2.82 | 7.38 | -13.7 | 2 | -0.803 | 0.379 | 28.5 | 1.29 | 0.135 | 0.01255 | 15418 | -- | -- |
| 5076.39 | 3.34 | 6.1 | -6.26 | 0.798 | 1.07 | -1.87 | -- | 3.59 | 23.6 | 5.481 | 8 | -- | -- |
| 3614.71 | 2.8 | 7.37 | -13.7 | 2.02 | -0.785 | -- | 28.7 | 1.32 | 0.142 | 0.02434 | 15391 | -- | -- |
| 5023.51 | 3.3 | 6.05 | -6.24 | 0.334 | 2.12 | -- | -- | 3.69 | 10.1 | 10 | 16 | -- | -- |
| 3849.11 | 2.89 | 7.2 | -13.5 | -- | -2.47 | -- | 24.2 | 1.29 | -- | 0.17 | 15425 | -- | -- |
| 5101.08 | 3.35 | 6.14 | -6.28 | 2.03 | -- | -1.76 | -- | 3.53 | 23.8 | -- | -- | -- | -- |
| 5114.25 | 3.35 | 6.13 | -6.21 | 2.04 | -- | -- | -- | 3.54 | 23.9 | -- | -- | -- | -- |
| 4516.62 | 3.13 | 6.26 | -10.4 | -- | -5.55 | -- | -- | 1.28 | -- | 0.03583 | 15743 | -- | -- |
| 6040.89 | 3.62 | 5.93 | -- | 0.189 | 2.09 | -- | -- | 4.25 | 13.6 | 18.63 | 4 | -- | -- |
| 5376.98 | 3.43 | 6.09 | -6.15 | -- | -- | -- | -- | 3.57 | -- | -- | -- | -- | -- |
| 6131.65 | 3.66 | 5.97 | -- | 1.97 | -- | -- | -- | 4.23 | 23.7 | -- | -- | -- | -- |
| 6042.44 | 3.62 | 5.93 | -- | -- | 1.98 | -- | -- | 4.23 | -- | 19.02 | 4 | -- | -- |
| 6374.91 | 3.73 | 5.93 | -- | -- | -- | -- | -- | 4.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 3477.69 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 9 | 3513.25 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 23 | 3546.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 26 | 3553.01 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 27 | 3554.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 34 | 3572.42 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 40 | 3584.73 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 48 | 3589.56 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 68 | 3610.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 80 | 3618.64 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 83 | 3621.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 84 | 3621.20 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 91 | 3624.35 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 99 | 3625.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 101 | 3625.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 112 | 3631.22 | radiation | 40 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 113 | 3631.45 | humidity | 90 | 14400 | > th | dose dependent | sin | 9 | NA |
| 116 | 3632.83 | radiation | 40 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 118 | 3633.49 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 136 | 3637.21 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 138 | 3637.31 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 140 | 3637.61 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 178 | 3644.25 | radiation | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 185 | 3645.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 186 | 3645.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 247 | 3662.38 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 255 | 3663.13 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 278 | 3668.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 289 | 3670.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 291 | 3670.64 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 299 | 3673.25 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 341 | 3679.25 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 346 | 3679.64 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 347 | 3680.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 350 | 3680.95 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 362 | 3681.91 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 10 |
| 363 | 3681.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 370 | 3682.40 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 3 |
| 389 | 3685.34 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 413 | 3687.15 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 424 | 3688.04 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 441 | 3691.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 456 | 3694.63 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 464 | 3695.67 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 12 |
| 474 | 3697.12 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 478 | 3697.49 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 480 | 3698.16 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 488 | 3698.88 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 493 | 3699.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 505 | 3700.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 15 |
| 518 | 3701.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 525 | 3701.49 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 554 | 3703.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 559 | 3704.03 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 24 | 2 |
| 585 | 3706.80 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 13 |
| 591 | 3707.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 16 |
| 593 | 3707.14 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 19 |
| 609 | 3707.43 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 618 | 3708.15 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 638 | 3709.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 646 | 3710.48 | radiation | 1 | 43200 | < th | dose dependent | sin | 3 | NA |
| 656 | 3711.37 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 665 | 3711.99 | temperature | 20 | 43200 | < th | dose independent | sin | 4 | NA |
| 680 | 3712.34 | temperature | 20 | 43200 | < th | dose independent | rect. | 2 | 12 |
| 730 | 3713.39 | temperature | 20 | 43200 | > th | dose independent | sin | 4 | NA |
| 797 | 3715.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 23 |
| 798 | 3715.57 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 838 | 3716.27 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 18 |