BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0247700 Os12g0247700|AK066682
(306 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73040.1 | chr1:27475159-27475777 REVERSE LENGTH=177 75 4e-14
AT1G19715.3 | chr1:6816934-6819432 REVERSE LENGTH=602 69 2e-12
AT3G16450.1 | chr3:5588593-5589792 FORWARD LENGTH=301 58 7e-09
AT3G16430.1 | chr3:5581830-5582959 FORWARD LENGTH=297 58 8e-09
AT3G16420.1 | chr3:5579560-5580674 FORWARD LENGTH=299 57 9e-09
AT1G52100.1 | chr1:19383291-19385123 REVERSE LENGTH=438 57 1e-08
AT1G52000.1 | chr1:19333352-19335700 REVERSE LENGTH=731 57 1e-08
AT3G21380.1 | chr3:7528478-7530457 FORWARD LENGTH=461 54 1e-07
AT3G16460.1 | chr3:5593029-5595522 FORWARD LENGTH=706 53 3e-07
AT1G52060.1 | chr1:19359039-19360651 REVERSE LENGTH=315 52 5e-07
AT3G16410.1 | chr3:5572145-5574359 FORWARD LENGTH=620 51 1e-06
AT3G16470.1 | chr3:5596096-5597709 REVERSE LENGTH=452 50 1e-06
AT1G52070.1 | chr1:19365140-19366900 REVERSE LENGTH=316 50 1e-06
AT1G52040.1 | chr1:19350595-19352578 REVERSE LENGTH=463 49 3e-06
AT1G52030.2 | chr1:19346090-19348282 REVERSE LENGTH=643 49 5e-06
AT3G59590.1 | chr3:22014167-22015768 FORWARD LENGTH=455 48 5e-06
AT1G33790.2 | chr1:12256990-12260432 FORWARD LENGTH=746 48 7e-06
>AT1G73040.1 | chr1:27475159-27475777 REVERSE LENGTH=177
Length = 176
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 166 IGPWGSSHEGTVQDITESPKRLESITLYHGWSVDSISFTYLDHAGEKHKAGPWGGPGGDP 225
+GPWG + T D R I L + +DSIS Y D G+ K+ GG GG+
Sbjct: 15 VGPWGGNGGTTWDDGIYDGVR--EIRLVYDHCIDSISVIY-DKNGKPAKSEKHGGVGGNK 71
Query: 226 ---IMIEFGSSEFLKEVSGTFGPY--EGSTVITSINFITNKQTYGPFGRQEGTPFSVPAQ 280
I +++ E+L VSG + P G+ VI S+ F +NKQ YGP+G ++GTPF+
Sbjct: 72 TSEIKLQY-PEEYLTGVSGYYCPMVNSGTPVIRSMTFKSNKQVYGPYGVEQGTPFTFSV- 129
Query: 281 NNSSIVGFFGRSGKYINAVGVYV 303
N IVG GRSG Y++++G ++
Sbjct: 130 NGGRIVGMNGRSGWYLDSIGFHL 152
>AT1G19715.3 | chr1:6816934-6819432 REVERSE LENGTH=602
Length = 601
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 16/149 (10%)
Query: 166 IGPWGSSHEGTVQDITESPKRLESITLYHGWSVDSISFTYLDHAGEKHKAGPWGGPGGDP 225
+GPWG D + ++ I + HG +DSI Y +K+ + W G
Sbjct: 16 LGPWGGQSGHAWDDGMYTT--VKQIIIAHGSGIDSIQIEY-----DKNGSSVWSEKRGGK 68
Query: 226 IMIEFGSS------EFLKEVSGTFGPYE--GSTVITSINFITNKQTYGPFGRQEGTPFSV 277
+F E+L V+GT+G ++ G+ + S+ F +N++ YGPFG GT F++
Sbjct: 69 GGKKFDKVKFDYPHEYLISVNGTYGSFDVWGTICVRSLTFESNRRKYGPFGVDSGTFFAL 128
Query: 278 PAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
P ++ S I+GF G++G Y++A+GV+ QPI
Sbjct: 129 P-KSGSKIIGFHGKAGWYLDAIGVHTQPI 156
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 146 ELTIHGFCPLLKGSQCPV----TKIGPWGSSHEGTVQDITESPKRLESITLYHGWSVDSI 201
E+T H + SQ + GPWG + D + R +++ G +
Sbjct: 219 EVTKHKLVTDTEKSQSKIEGGAKTYGPWGGTGGIMFDDGIYTGIRQINLSRNVGIVSMKV 278
Query: 202 SFTYLDHAGEKHKAGPWGGPGGDPIMIEFGSSEFLKEVSGTFGP--YEGSTVITSINFIT 259
+ + A K G GG D I+ ++ SE L V+GT+GP Y G VI S+ F T
Sbjct: 279 CYDFRGQAVWGSKHGGVGGFKHDKIVFDY-PSEVLTHVTGTYGPLMYMGPNVIKSLTFRT 337
Query: 260 NKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYV 303
N+ +GP+G ++G F+ + +VGF GR G +++++GV+V
Sbjct: 338 NRGKHGPYGEEQGPSFT-HQMDEGKVVGFLGREGLFLDSIGVHV 380
>AT3G16450.1 | chr3:5588593-5589792 FORWARD LENGTH=301
Length = 300
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 219 GGPGGDPIMIEFGS------SEFLKEVSGTFGPYEGST--VITSINFITNKQTYGPFGRQ 270
GG G P ++ F SE++ V GT+ GS +IT + F TNKQT PFG +
Sbjct: 204 GGEHGKPTLLGFEEFEIDYPSEYITAVEGTYDKIFGSDGLIITMLRFKTNKQTSAPFGLE 263
Query: 271 EGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
GT F + + + IVGF G++ + ++ GV+V P+
Sbjct: 264 AGTAFELKEEGH-KIVGFHGKASELLHQFGVHVMPL 298
>AT3G16430.1 | chr3:5581830-5582959 FORWARD LENGTH=297
Length = 296
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 233 SEFLKEVSGTFGPYEGS--TVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFG 290
SE++ V GT+ GS +VIT + F TNKQT PFG + GT F + + + IVGF G
Sbjct: 220 SEYIIAVEGTYDKIFGSDGSVITMLRFKTNKQTSPPFGLEAGTAFELKEEGH-KIVGFHG 278
Query: 291 RSGKYINAVGVYVQPI 306
R+ ++ +GV+V+P+
Sbjct: 279 RADALLHKIGVHVRPV 294
>AT3G16420.1 | chr3:5579560-5580674 FORWARD LENGTH=299
Length = 298
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 233 SEFLKEVSGTFGPYEGS--TVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFG 290
SE++ V GT+ GS +VIT + F TNKQT PFG + GT F + + + IVGF G
Sbjct: 222 SEYITAVDGTYDKIFGSDGSVITMLRFKTNKQTSPPFGLEAGTVFELKEEGH-KIVGFHG 280
Query: 291 RSGKYINAVGVYVQPI 306
R+ ++ +GV+V+P+
Sbjct: 281 RADVLLHKIGVHVRPL 296
>AT1G52100.1 | chr1:19383291-19385123 REVERSE LENGTH=438
Length = 437
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 198 VDSISFTYLDHAGEKHKAGPWGGPGGDPIMIEFGSSEFLKE-VSGTFGPYEGST-VITSI 255
+ I F Y+ AG+K GP G G F + KE + G Y ST VI +
Sbjct: 37 IQFIKFEYVK-AGKK-VIGPIHGASGRGFTETFEINNLEKEYLLSIEGYYNASTGVIQCL 94
Query: 256 NFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
FITNK+TY P G EG F++ A + S I+GF G + KY+N++G Y I
Sbjct: 95 QFITNKKTYDPIGYNEGARFTLSA-SRSKIIGFHGFADKYLNSLGAYFIKI 144
>AT1G52000.1 | chr1:19333352-19335700 REVERSE LENGTH=731
Length = 730
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%)
Query: 199 DSISFTYLDHAGEKHKAGPWGGPGGDPIMIEFGSSEFLKEVSGTFGPYEGSTVITSINFI 258
D I +++ G K+ P G G S E++ EV+G + VITS+ F
Sbjct: 20 DVIRSIEVEYDGTSLKSQPRGTAGTKIDGFTLSSDEYITEVNGYYKTTFSGEVITSLTFK 79
Query: 259 TNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQP 305
TNK+TYG +G + + FSV A ++ IVGF G S +N++ + P
Sbjct: 80 TNKRTYGTYGNKTSSYFSVAAPKDNQIVGFLGSSSHALNSIDAHFAP 126
>AT3G21380.1 | chr3:7528478-7530457 FORWARD LENGTH=461
Length = 460
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%)
Query: 199 DSISFTYLDHAGEKHKAGPWGGPGGDPIMIEFGSSEFLKEVSGTFGPYEGSTVITSINFI 258
D I+ ++ G+ H G PG + E++ +V+G + I ++ F
Sbjct: 25 DVINSIEAEYDGDTHNPHHHGTPGKKSDGVSLSPDEYITDVTGYYKTTGAEDAIAALAFK 84
Query: 259 TNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVY 302
TNK YGP+G + FS+ A ++ I GF G S +N++ V+
Sbjct: 85 TNKTEYGPYGNKTRNQFSIHAPKDNQIAGFQGISSNVLNSIDVH 128
>AT3G16460.1 | chr3:5593029-5595522 FORWARD LENGTH=706
Length = 705
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 251 VITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
VIT++ F TNK +YGP+G + G S P I GF G SG +N + V+ PI
Sbjct: 73 VITALTFTTNKTSYGPYGTKSGFQISAPEATGKQISGFLGTSGNVLNTIDVHYSPI 128
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 228 IEFGSSEFLKEVSGTFGPYEG-STVITSINFITNK-QTYGPFGRQEGTPFSVPAQNNSSI 285
E S E++ V G + G TV+T++ F T+K +T GPFG GT F + I
Sbjct: 470 FELESDEYITSVEGYYEKNFGVDTVVTTLIFKTSKNKTAGPFGIVSGTKFEF-KKEGYKI 528
Query: 286 VGFFGRSGKYINAVGVYVQP 305
GF GR+G+Y+NA+G Y+ P
Sbjct: 529 TGFHGRAGEYVNAIGAYLAP 548
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 198 VDSISFTYLDHAGEKHKAGPWGGP---GGDPIMIEFGSSEFLKEVSGTFGPYEGST-VIT 253
+ ++SF Y D AG+ + G P G + +++ SE++ V GT+ G+ ++
Sbjct: 594 IGAVSFVY-DKAGQVVEGKEHGKPTLLGFEEFELDY-PSEYITAVDGTYDAIFGNEPIVN 651
Query: 254 SINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
+ F TNK+ PFG GT F ++ IVGF GR+G ++ GV+V PI
Sbjct: 652 MLRFTTNKRVSIPFGIGAGTAFEF-KKDGQKIVGFHGRAGDLLHKFGVHVAPI 703
>AT1G52060.1 | chr1:19359039-19360651 REVERSE LENGTH=315
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 233 SEFLKEVSGTFG----PYEGSTVITSINFITNKQTYGP-FGRQEGTPFSVPAQNNSSIVG 287
+EFL V GT+ P VITS++F T+K P +G GT F + +Q N+ IVG
Sbjct: 237 NEFLISVEGTYDSILFPDHYVLVITSLSFKTSKGRISPTYGVVSGTKFVLESQGNA-IVG 295
Query: 288 FFGRSGKYINAVGVYVQPI 306
F+GR+G +A+GVY PI
Sbjct: 296 FYGRNGGAFDAIGVYFSPI 314
>AT3G16410.1 | chr3:5572145-5574359 FORWARD LENGTH=620
Length = 619
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 195 GWSVDSISFTYLDHAGEKHKAGPWGGPG----GDPIMIEFGSSEFLKEVSGTFGPYEGST 250
G ++ + FTY+ + G+ +A G G DP +I E L V G + P EG
Sbjct: 34 GNGIEYVKFTYVKN-GQTEEAPLRGVKGRSFEADPFVINH-PEEHLVSVEGRYNP-EG-- 88
Query: 251 VITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
+I + F +NK+T G ++GTPF++ Q+ IVGF+G +G ++++G Y P+
Sbjct: 89 LILGLTFKSNKKTSDLIGYEDGTPFTLQVQDK-KIVGFYGFAGNNLHSLGAYFAPL 143
>AT3G16470.1 | chr3:5596096-5597709 REVERSE LENGTH=452
Length = 451
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 230 FGSSEFLKEVSGTFGPY--EGSTVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVG 287
G E++ VSG + + I S+ F TNK+T P+G + GT F V + + IVG
Sbjct: 372 LGPDEYVTAVSGYYDKIFSVDAPAIVSLKFKTNKRTSIPYGLEGGTEF-VLEKKDHKIVG 430
Query: 288 FFGRSGKYINAVGVYVQPI 306
F+G++G+Y+ +GV V PI
Sbjct: 431 FYGQAGEYLYKLGVNVAPI 449
>AT1G52070.1 | chr1:19365140-19366900 REVERSE LENGTH=316
Length = 315
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 233 SEFLKEVSGTFG--PYEGSTVITSINFITNKQTYGP-FGRQEGTPFSVPAQNNSSIVGFF 289
+E+L V GT+ P + VI S+ F T+K P +G GT F + +Q N+ IVGF+
Sbjct: 238 NEYLISVEGTYNILPDDNVLVIRSLIFKTSKGRISPTYGFVSGTKFVLESQGNA-IVGFY 296
Query: 290 GRSGKYINAVGVYVQPI 306
GR G +A+GVY PI
Sbjct: 297 GRDGGAFDAIGVYFSPI 313
>AT1G52040.1 | chr1:19350595-19352578 REVERSE LENGTH=463
Length = 462
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 233 SEFLKEVSGTFGPYEG--STVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFG 290
SE++ V G + G + V+TS+ F TNK+T PFG G F + ++ +VGF G
Sbjct: 380 SEYITSVEGYYDKIFGVEAEVVTSLMFKTNKRTSQPFGMTAGEHFELK-EDGYKVVGFHG 438
Query: 291 RSGKYINAVGVYVQPI 306
++G ++ +GV++ PI
Sbjct: 439 KAGDLVHQIGVHIVPI 454
>AT1G52030.2 | chr1:19346090-19348282 REVERSE LENGTH=643
Length = 642
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 233 SEFLKEVSGTFGPYEG--STVITSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFG 290
SE++ V G + G + V+TS+ F TNK+T PFG G F + ++ IVGF G
Sbjct: 560 SEYITSVEGYYDKIFGVEAEVVTSLTFKTNKRTSQPFGMTAGEHFELN-EDGYKIVGFHG 618
Query: 291 RSGKYINAVGVYVQPI 306
++G ++ +GV+ PI
Sbjct: 619 KAGDLVHQIGVHAVPI 634
>AT3G59590.1 | chr3:22014167-22015768 FORWARD LENGTH=455
Length = 454
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 224 DPIMIEFGSSEFLKEVSGTFGPYEGSTVITSINFITNKQTYGP-FGRQEGTPFSVPAQNN 282
D IMI G ++++ V GT+ + ITSI F K P +GR GTPFS+ +
Sbjct: 361 DEIMIAGG--DYIEAVEGTYT----ESHITSITFRMRKGDMMPQYGRLNGTPFSLRGERG 414
Query: 283 SSIVGFFGR-SGKYINAVGVYVQP 305
S +GF+GR SG ++ A+GV+ P
Sbjct: 415 SKAIGFYGRSSGVHLTALGVHFSP 438
>AT1G33790.2 | chr1:12256990-12260432 FORWARD LENGTH=746
Length = 745
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 198 VDSISFTYLDHAGEKHKAGPWGGP---GGDPIMIEFGSSEFLKEVSGTFGPYEGST--VI 252
V ++ F Y D + + G P G + +E+ SE++ V G F GS VI
Sbjct: 635 VSAVKFVY-DKDSQVAEGNDHGKPTLLGYEEFKLEY-PSEYITTVEGCFDKIFGSGGGVI 692
Query: 253 TSINFITNKQTYGPFGRQEGTPFSVPAQNNSSIVGFFGRSGKYINAVGVYVQPI 306
T + F TNK+T PFG + + F V + IVGF G S ++ +GVYV PI
Sbjct: 693 TMLKFKTNKRTSPPFGLETTSNF-VLGKEGYKIVGFHGTSSHELHQLGVYVMPI 745
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,241,164
Number of extensions: 326836
Number of successful extensions: 777
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 785
Number of HSP's successfully gapped: 30
Length of query: 306
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 208
Effective length of database: 8,419,801
Effective search space: 1751318608
Effective search space used: 1751318608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)