BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0333700 Os10g0333700|Os10g0333700
(167 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0333700 Plant disease resistance response protein fami... 354 2e-98
Os01g0352400 163 7e-41
Os10g0334500 Plant disease resistance response protein fami... 142 1e-34
Os10g0335000 Conserved hypothetical protein 137 3e-33
Os12g0449800 112 1e-25
Os08g0349100 Plant disease resistance response protein fami... 108 1e-24
Os08g0354400 108 2e-24
Os08g0349800 108 2e-24
Os12g0247700 Similar to Jasmonate-induced protein 106 6e-24
Os12g0198700 Similar to Jasmonate-induced protein 106 7e-24
Os11g0616100 Similar to Serine/threonine-protein kinase mos... 97 5e-21
Os12g0227500 Similar to Beta-glucosidase aggregating factor 97 6e-21
Os12g0199000 Similar to Agglutinin alpha chain (MPA) 97 7e-21
Os01g0365801 70 7e-13
>Os10g0333700 Plant disease resistance response protein family protein
Length = 167
Score = 354 bits (908), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 167/167 (100%), Positives = 167/167 (100%)
Query: 1 MAYYEIAPVECPLQQNELYMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISD 60
MAYYEIAPVECPLQQNELYMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISD
Sbjct: 1 MAYYEIAPVECPLQQNELYMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISD 60
Query: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS 120
SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS
Sbjct: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS 120
Query: 121 GTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDSVLYLTYK 167
GTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDSVLYLTYK
Sbjct: 121 GTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDSVLYLTYK 167
>Os01g0352400
Length = 328
Score = 163 bits (412), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query: 1 MAYYEIAPVECPLQQNELYMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISD 60
MAYY IAP+ C L QNELYMHLY+ Q G + +Q V++ +P FG+T W I+D
Sbjct: 1 MAYYAIAPILCALVQNELYMHLYINQVYAGQSTNQLVVIT-SSQPQGFGITVINDWPITD 59
Query: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS 120
A V RA+G H Q+ + WY S N++FED RF GS LQVMGT P +G+W+I
Sbjct: 60 G----ANTVGRAQGLHFQSGQTSQKWYTSMNLIFEDTRFSGSSLQVMGTIPQDGEWSIIG 115
Query: 121 GTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDS 160
GTGEF A GI++ VIQ G EL +HAFYTPM S
Sbjct: 116 GTGEFVAAQGIVEHNVIQEAGGAWTYELKIHAFYTPMQSS 155
>Os10g0334500 Plant disease resistance response protein family protein
Length = 204
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 8/163 (4%)
Query: 3 YYEIAPVECPL-QQNELYMHLYLRQADRG---PNRDQEVILNPKVRPNDFGLTAATAWTI 58
YY+I PVEC QNE+ MHLYL Q G PNR++E ++ PN FG T W +
Sbjct: 26 YYDICPVECGCPDQNEVTMHLYLHQFVAGANHPNRNEEFVI-ASSYPNGFGTTLVDDWYL 84
Query: 59 SDSLDPSAKIVARAEGFHMQTSYNNTS-WYASFNIVFEDDRFKGSMLQVMGTTPA-EGQW 116
+ + +P+ IVAR +G H+Q +N + WY S NIVF+DDRFKGS LQVMG A G+W
Sbjct: 85 TATTNPNDNIVARVQGMHVQAGQSNANMWYTSHNIVFQDDRFKGSTLQVMGIIAASSGEW 144
Query: 117 AISSGTGEFALAHGIIKQKVIQSTPGEN-VKELHVHAFYTPMN 158
++ GTGEF++AHG IK S+ E+ V+EL++ A YT N
Sbjct: 145 SVIGGTGEFSMAHGSIKFTTDPSSTSEDAVRELNIRAIYTADN 187
>Os10g0335000 Conserved hypothetical protein
Length = 186
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Query: 3 YYEIAPVECPLQ-QNELYMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISDS 61
++++ PV L+ Q E+ M LYL Q GPN +QE ++ P P FG+ W I D
Sbjct: 5 FFKVIPVRPVLRDQCEITMRLYLHQVVTGPNHNQETMV-PSSHPASFGMIVINDWPIYDG 63
Query: 62 LD-PSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS 120
D ++ IVA A G H+Q N +WY S NI F D RF GS LQVMGTTP G+WAI
Sbjct: 64 PDFNTSTIVAHARGMHVQVDQVNNTWYTSMNIEFVDARFNGSKLQVMGTTPETGEWAIVG 123
Query: 121 GTGEFALAHGIIKQKVIQSTPG-ENVKELHVHAFYTPMNDSVLYLTY 166
GTG+ A+A+G I+ ++++ PG E ++L +HAFY+ L +++
Sbjct: 124 GTGQLAMAYGTIQHNIVKNNPGIETTRQLDIHAFYSTPQTQALPISF 170
>Os12g0449800
Length = 196
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 11/156 (7%)
Query: 9 VECPLQQNELYMHLYLRQADRG---PNRDQEVILNPKVRPNDFGLTAATAWTISDSLDPS 65
+CP QQ E+ +H YL Q G PNR++E + + P+ G W+++ LDP+
Sbjct: 28 CDCP-QQCEVKLHYYLHQFRAGANHPNRNEEFVTSGG--PSGLGAGLIHDWSLTTGLDPN 84
Query: 66 AKIVARAEGFHMQTSYNN-TSWYASFNIVFEDDRFKGSMLQVMGTTPAE----GQWAISS 120
IV RA+G+H+ S ++ +WY S NIVF+D ++ GS LQVMG G+W+I
Sbjct: 85 VNIVGRAQGWHIVASQSSPANWYLSQNIVFQDSKYAGSTLQVMGIIEGSEEKVGEWSIVG 144
Query: 121 GTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYTP 156
GTGEF A G IK + I+ E ++EL + FYTP
Sbjct: 145 GTGEFTNARGNIKYRAIKKEDVEWIRELDIQVFYTP 180
>Os08g0349100 Plant disease resistance response protein family protein
Length = 188
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Query: 5 EIAPVECPL-QQNELYMHLYLRQ--ADRG-PNRDQEVILNPKVRPNDFGLTAATAWTISD 60
+I P C Q+NE +H+YL Q A G PNR++ ++N P FG W ++
Sbjct: 27 DIYPCPCKCSQENETSLHMYLHQFPALPGVPNRNEYGVIN-STEPVGFGQMYVHDWLLTT 85
Query: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQV---MGTTPAEGQWA 117
+ +V R +GFH+Q TSWY + IVF D F GS ++V +G P GQW+
Sbjct: 86 GTSANENVVGRLQGFHLQAGQTTTSWYMAHTIVFTDGSFAGSTIEVSGLLGVKP-NGQWS 144
Query: 118 ISSGTGEFALAHGIIKQKVIQ-STPGENVKELHVHAFYTP 156
I+ GTG FA AHG IK Q ST ++++EL +H F+TP
Sbjct: 145 ITGGTGTFASAHGTIKFTNSQSSTATDDIRELDIHVFHTP 184
>Os08g0354400
Length = 188
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 5 EIAPVECPL-QQNELYMHLYLRQ--ADRG-PNRDQEVILNPKVRPNDFGLTAATAWTISD 60
+I P C Q+NE +H+YL Q A G PNR++ ++N P FG W ++
Sbjct: 27 DIYPCPCKCSQENETSLHMYLHQFPALPGVPNRNEYGVIN-STEPIGFGQMYVHDWLLTT 85
Query: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAE--GQWAI 118
+ +V R +GFH+Q TSWY + +VF D F GS ++V G + GQW+I
Sbjct: 86 GTSANENVVGRLQGFHLQAGQTTTSWYMAHTMVFSDGSFAGSTIEVFGLLGVKPNGQWSI 145
Query: 119 SSGTGEFALAHGIIKQKVIQ-STPGENVKELHVHAFYTP 156
+ GTG FA AHG IK Q ST ++++EL +H F+TP
Sbjct: 146 TGGTGTFASAHGTIKFTNSQSSTATDDIRELDIHVFHTP 184
>Os08g0349800
Length = 188
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 90/162 (55%), Gaps = 10/162 (6%)
Query: 3 YYEIAPVECPL-QQNELYMHLYLRQ--ADRG-PNRDQEVILNPKVRPNDFGLTAATAWTI 58
+ +I P C Q+NE +H+YL Q A G PNR++ ++N P FG W +
Sbjct: 25 FGDIYPCPCKCSQENETSLHMYLHQFPALPGVPNRNEYGVIN-STEPIGFGQMYVHDWLL 83
Query: 59 SDSLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQV---MGTTPAEGQ 115
+ + +V R +GFH+Q TSWY + +VF D F GS ++V +G P GQ
Sbjct: 84 TTGTSANENVVGRLQGFHLQAGQTTTSWYMAHTMVFSDGSFAGSTIEVSGLLGVKP-NGQ 142
Query: 116 WAISSGTGEFALAHGIIKQKVIQ-STPGENVKELHVHAFYTP 156
W+I+ GTG FA AHG IK Q ST ++++EL +H F+TP
Sbjct: 143 WSITGGTGTFASAHGTIKFTNSQSSTATDDIRELDIHVFHTP 184
>Os12g0247700 Similar to Jasmonate-induced protein
Length = 306
Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 6/150 (4%)
Query: 5 EIAPVECPLQQNEL-YMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISDSLD 63
+I P +Q N++ + LYL GP ++Q + + + G W++ D +
Sbjct: 8 QITPCGMLVQGNQINFTKLYLHHTPAGPEQNQSAVTSND-KKTGLGCIVVNNWSVYDGIG 66
Query: 64 PSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISSGTG 123
AK+VA A+G H+ +W+ SF++VFED+R KGS LQVMG EG WAI GTG
Sbjct: 67 SDAKLVAYAKGLHVFAG----AWHNSFSLVFEDERLKGSTLQVMGLIVEEGDWAIVGGTG 122
Query: 124 EFALAHGIIKQKVIQSTPGENVKELHVHAF 153
+FA+A G+I +K+ + N+ EL +H F
Sbjct: 123 QFAMATGVILKKMQEQKQYGNIIELTIHGF 152
>Os12g0198700 Similar to Jasmonate-induced protein
Length = 307
Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 5 EIAPVECPLQQNEL-YMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISDSLD 63
+ P P+Q NE+ + LYL GP +Q + + + G W + D +
Sbjct: 7 QFTPCSTPIQGNEINFSKLYLHHTPAGPRPNQSGVTSTN-KETGLGSLVVNNWQVYDGIG 65
Query: 64 PSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISSGTG 123
AK+VA A+G H+ +W+ SF +VFED+RFKGS L+VMG +G+WAI GTG
Sbjct: 66 CDAKVVAHAQGLHVYAG----NWHNSFTLVFEDERFKGSTLEVMGIVVEQGEWAIVGGTG 121
Query: 124 EFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDS 160
+FA+A+G+I +K + N+ EL + F + S
Sbjct: 122 QFAMANGVIFKKFHEQKKEGNIMELTIKGFCPVLKGS 158
>Os11g0616100 Similar to Serine/threonine-protein kinase mos (EC 2.7.1.37)
(Oocyte maturation factor mos) (Fragment)
Length = 271
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 1 MAYYEIAPVECPLQQNELYMHLYLRQADRGPNRDQEVILNPK---VRPN----DFGLTAA 53
MA+ I L + L+L QA GPN++Q+V++ P ++P FG+ A
Sbjct: 1 MAHELIPAQTTSSTHKHLNLDLFLHQAYSGPNKNQQVLIKPGGNYLQPGGNYLQFGVLAV 60
Query: 54 TAWTISDSLDPS-AKIVARAEGFHMQTSYNNTS-WYASFNIVFED-DRFKGSMLQVMGT- 109
W + D D S K+VARA G HMQT W+ + IVF D F GS L V GT
Sbjct: 61 HDWPLYDDEDQSKGKLVARARGHHMQTVQEMVDQWFTTGQIVFVDGSEFVGSTLLVAGTY 120
Query: 110 -TPAEGQWAISSGTGEFALAHGIIKQKVIQSTPGEN-VKELHVHAFYTPM 157
T +G+WAI GTG+F+LA G+I ++++++ PG V+ L + A Y+ +
Sbjct: 121 TTGQKGEWAIVGGTGKFSLAQGVIHKEMVRTNPGTGEVRLLQIRAKYSTV 170
>Os12g0227500 Similar to Beta-glucosidase aggregating factor
Length = 154
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 2 AYYEIAPVECPLQQNEL-YMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISD 60
+YYEI ++ E + +LYL +Q+ I++ V G WT+ D
Sbjct: 3 SYYEITSRGALIKGREFNFSNLYLYHIYNSSEPNQQQIID-NVSSTAMGGLTVNNWTVYD 61
Query: 61 SLDPSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISS 120
+ A +VAR +G H +W+ SF +VFED+RF GS L+V G WAI
Sbjct: 62 GVASDATLVARGQGLHTYAG----NWHCSFTLVFEDERFNGSTLEVKGIFEETHDWAIVG 117
Query: 121 GTGEFALAHGIIKQKVIQSTPGENVKELHVHAF 153
GTGEFA+A G+IK+ V + TP + EL + F
Sbjct: 118 GTGEFAMASGVIKKTVYERTPEGTIIELTIRGF 150
>Os12g0199000 Similar to Agglutinin alpha chain (MPA)
Length = 258
Score = 96.7 bits (239), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 5 EIAPVECPLQQNEL-YMHLYLRQADRGPNRDQEVILNPKVRPNDFGLTAATAWTISDSLD 63
+ P Q NE+ + LYL GP DQ L R G W + D +
Sbjct: 9 QFTPRSSLFQGNEINFSMLYLHHTPAGPRPDQSG-LTGNNRETGLGPLVVNNWPVYDGIG 67
Query: 64 PSAKIVARAEGFHMQTSYNNTSWYASFNIVFEDDRFKGSMLQVMGTTPAEGQWAISSGTG 123
AK+VARA+G H+ +W+ SF++VF+D+R GS L+VMG G+WAI GTG
Sbjct: 68 RDAKVVARAQGLHIYAG----NWHNSFSLVFKDER-SGSTLEVMGIVVERGEWAIVGGTG 122
Query: 124 EFALAHGIIKQKVIQSTPGENVKELHVHAFYTPMNDSVLYL 164
+FA+A+G+I +K + N+ EL + F + S L L
Sbjct: 123 QFAMANGVIFKKFHEQKQEGNIMELTIQGFCPVLKGSQLTL 163
>Os01g0365801
Length = 87
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 98 RFKGSMLQVMGTTP--AEGQWAISSGTGEFALAHGIIKQKVIQSTPGENVKELHVHAFYT 155
RF GS LQ+ G P A G+W+I+ GTGE ALA GI K K +Q + NV EL +HA+Y+
Sbjct: 7 RFNGSTLQITGVLPQSANGEWSITGGTGELALARGIAKFKAVQMSSLSNVYELTLHAYYS 66
Query: 156 PMND 159
PM+
Sbjct: 67 PMDS 70
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,857,428
Number of extensions: 230398
Number of successful extensions: 436
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 407
Number of HSP's successfully gapped: 14
Length of query: 167
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 74
Effective length of database: 12,179,899
Effective search space: 901312526
Effective search space used: 901312526
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)